FFCP PHASE1:Hg19::chrX:107288197..107288212,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=340547 | |EntrezGene=340547 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28675 | |HGNC=28675 | ||
|TSSclassifier=strong | |||
|UniProt=C9J4P2,Q86XK7 | |UniProt=C9J4P2,Q86XK7 | ||
|association_with_transcript=0bp_to_ENST00000415430,NM_001170553,NM_182607,uc004eno.2,uc011msk.1_5end | |association_with_transcript=0bp_to_ENST00000415430,NM_001170553,NM_182607,uc004eno.2,uc011msk.1_5end | ||
|cluster_id=chrX:107288197..107288212,+ | |||
|coexpression_cluster_id=C238 | |coexpression_cluster_id=C238 | ||
|description=CAGE_peak_2_at_VSIG1_5end | |description=CAGE_peak_2_at_VSIG1_5end | ||
|id=chrX:107288197..107288212,+ | |id=chrX:107288197..107288212,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002178;1.67e-09;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002178,1.67e-09,3 | |||
|ontology_enrichment_development_v019=UBERON:0006242;7.62e-26;1!UBERON:0009117;5.41e-11;10!UBERON:0005564;5.41e-11;10!UBERON:0004161;5.54e-10;11!UBERON:0009497;1.36e-08;13 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0000945;8.13e-21;5!UBERON:0010039;8.13e-21;5!UBERON:0000473;1.71e-13;8!UBERON:0005409;2.34e-10;22!UBERON:0003135;4.42e-10;11!UBERON:0002110;1.54e-09;3!UBERON:0002114;1.81e-09;2!UBERON:0001041;4.49e-08;14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,1.71e-13,8;UBERON:0000945,2.07e-13,8;UBERON:0010039,2.07e-13,8;UBERON:0003135,4.42e-10,11;UBERON:0002110,1.54e-09,3;UBERON:0006242,1.54e-09,3;UBERON:0002114,1.81e-09,2;UBERON:0005409,3.07e-09,25 | |||
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|short_description=p2@VSIG1 | |short_description=p2@VSIG1 | ||
}} | }} |
Latest revision as of 23:10, 18 September 2015
Short description: | p2@VSIG1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_VSIG1_5end |
Coexpression cluster: | C238_stomach_gall_breast_duodenum_temporal_MCF7_smallcell |
Association with transcript: | 0bp_to_ENST00000415430, NM_001170553, NM_182607, uc004eno.2, uc011msk.1_5end |
EntrezGene: | VSIG1 |
HGNC: | 28675 |
UniProt: | C9J4P2Q86XK7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of stomach | 1.67e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
testis | 1.71e-13 | 8 |
stomach | 2.07e-13 | 8 |
food storage organ | 2.07e-13 | 8 |
male reproductive organ | 4.42e-10 | 11 |
gallbladder | 1.54e-09 | 3 |
gall bladder primordium | 1.54e-09 | 3 |
duodenum | 1.81e-09 | 2 |
gastrointestinal system | 3.07e-09 | 25 |