FFCP PHASE1:Hg19::chr21:47546004..47546019,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr21:47546004..47546019,+ to FFCP PHASE1:Hg19::chr21:47546004..47546019,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1292 | |EntrezGene=1292 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=2212 | |HGNC=2212 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-384bp_to_uc002zic.1_5end | |||
|cluster_id=chr21:47546004..47546019,+ | |||
|coexpression_cluster_id=C198 | |||
|description=CAGE_peak_26_at_COL6A2_5end | |||
|id=chr21:47546004..47546019,+ | |||
|ontology_enrichment_celltype=CL:0000055!8.18e-41!180;CL:0000057!4.76e-25!75;CL:0000680!8.68e-18!57;CL:0000056!8.68e-18!57;CL:0000355!8.68e-18!57;CL:0000393!1.65e-16!60;CL:0000211!1.65e-16!60;CL:0000187!2.13e-16!54;CL:0000183!9.11e-16!59;CL:0000048!1.41e-14!430;CL:0000723!1.23e-13!436;CL:0000034!9.63e-13!444;CL:0002620!2.07e-12!23;CL:0000192!4.52e-12!42;CL:0000514!4.52e-12!42;CL:0000359!2.56e-10!32;CL:0000499!3.09e-08!27;CL:0002371!3.22e-08!591;CL:0002570!2.10e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0002620;3.27e-11;23!CL:0002570;7.88e-11;8!CL:0000499;1.83e-09;28!CL:0000723;2.43e-08;61!CL:0000134;4.75e-08;55!CL:0000048;6.00e-08;58!CL:0000359;2.17e-07;32!CL:0000135;2.84e-07;3!CL:0000388;2.84e-07;3!CL:0002320;3.77e-07;188!CL:0000057;8.21e-07;73 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.08e-17,76;CL:0000048,6.48e-15,427;CL:0000723,2.28e-14,433;CL:0000034,1.15e-13,441;CL:0002320,2.96e-12,361;CL:0002620,5.58e-11,23;CL:0002570,7.20e-11,8;CL:0000499,1.61e-09,28;CL:0000134,5.35e-09,354;CL:0000219,1.66e-07,386;CL:0000680,2.16e-07,58;CL:0000056,2.16e-07,58;CL:0000355,2.16e-07,58;CL:0000359,2.44e-07,32;CL:0000135,2.85e-07,3;CL:0000388,2.85e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!1.84e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;1.06e-08;14!DOID:17;1.49e-08;5!DOID:450;1.49e-08;5!DOID:66;1.49e-08;5!DOID:423;1.49e-08;5!DOID:0080000;1.49e-08;5!DOID:11722;1.49e-08;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,1.16e-08,5;DOID:450,1.16e-08,5;DOID:66,1.16e-08,5;DOID:423,1.16e-08,5;DOID:0080000,1.16e-08,5;DOID:11722,1.16e-08,5;DOID:2394,1.44e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0000914!7.67e-22!83;UBERON:0002329!7.67e-22!83;UBERON:0003077!7.67e-22!83;UBERON:0003059!7.67e-22!83;UBERON:0007282!7.67e-22!83;UBERON:0009618!7.67e-22!83;UBERON:0007285!7.67e-22!83;UBERON:0004290!2.04e-20!70;UBERON:0000486!3.75e-17!82;UBERON:0002385!7.33e-17!63;UBERON:0001015!7.33e-17!63;UBERON:0000383!7.33e-17!63;UBERON:0001134!1.48e-16!61;UBERON:0002036!1.48e-16!61;UBERON:0003082!1.48e-16!61;UBERON:0005256!7.12e-14!143;UBERON:0002199!5.10e-11!45;UBERON:0002416!5.10e-11!45;UBERON:0003102!1.42e-09!95;UBERON:0002100!1.86e-09!216;UBERON:0004573!4.28e-09!33;UBERON:0004571!4.28e-09!33;UBERON:0002097!5.58e-09!40;UBERON:0004872!1.15e-08!84;UBERON:0000475!4.23e-08!365;UBERON:0001637!2.08e-07!42;UBERON:0003509!2.08e-07!42;UBERON:0004572!2.08e-07!42;UBERON:0000948!9.50e-07!24;UBERON:0005498!9.50e-07!24;UBERON:0004140!9.50e-07!24;UBERON:0009881!9.50e-07!24;UBERON:0004141!9.50e-07!24;UBERON:0003084!9.50e-07!24;UBERON:0007005!9.50e-07!24;UBERON:0004139!9.50e-07!24;UBERON:0004291!9.50e-07!24 | |||
|ontology_enrichment_uberon_v019=UBERON:0002199;6.09e-11;46!UBERON:0002416;6.09e-11;46!UBERON:0004905;4.74e-10;8!UBERON:0000982;4.74e-10;8!UBERON:0004770;4.74e-10;8!UBERON:0001013;2.54e-09;14!UBERON:0002097;5.12e-09;41!UBERON:0003102;1.23e-08;50!UBERON:0011135;1.49e-08;5!UBERON:0002216;1.49e-08;5!UBERON:0011134;1.49e-08;5!UBERON:0002209;1.49e-08;5!UBERON:0002213;1.49e-08;5!UBERON:0007844;1.49e-08;5!UBERON:0011138;1.49e-08;5!UBERON:0001130;1.49e-08;5!UBERON:0001066;1.49e-08;5!UBERON:0001468;1.49e-08;5!UBERON:0007846;2.84e-07;3!UBERON:0000043;2.84e-07;3!UBERON:0007845;2.84e-07;3!UBERON:0002384;8.36e-07;198!UBERON:0004573;9.09e-07;33!UBERON:0004571;9.09e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002199,4.10e-15,46;UBERON:0002416,4.10e-15,46;UBERON:0002384,7.01e-12,371;UBERON:0002097,3.36e-11,41;UBERON:0003102,8.00e-11,99;UBERON:0007524,1.15e-10,73;UBERON:0004905,1.63e-10,8;UBERON:0000982,1.63e-10,8;UBERON:0004770,1.63e-10,8;UBERON:0002329,4.81e-10,71;UBERON:0003059,4.81e-10,71;UBERON:0007282,4.81e-10,71;UBERON:0004290,4.81e-10,71;UBERON:0009618,4.81e-10,71;UBERON:0003077,8.29e-10,72;UBERON:0007285,8.29e-10,72;UBERON:0000486,2.27e-09,83;UBERON:0001013,2.64e-09,14;UBERON:0011135,5.96e-09,5;UBERON:0002216,5.96e-09,5;UBERON:0011134,5.96e-09,5;UBERON:0002209,5.96e-09,5;UBERON:0002213,5.96e-09,5;UBERON:0005856,5.96e-09,5;UBERON:0005866,5.96e-09,5;UBERON:0005863,5.96e-09,5;UBERON:0007844,5.96e-09,5;UBERON:0011138,5.96e-09,5;UBERON:0001130,5.96e-09,5;UBERON:0001066,5.96e-09,5;UBERON:0001468,5.96e-09,5;UBERON:0007503,1.58e-08,78;UBERON:0005256,3.84e-08,122;UBERON:0003104,4.97e-08,160;UBERON:0009142,4.97e-08,160;UBERON:0001134,2.37e-07,62;UBERON:0002036,2.37e-07,62;UBERON:0003082,2.37e-07,62;UBERON:0007846,2.85e-07,3;UBERON:0000043,2.85e-07,3;UBERON:0007845,2.85e-07,3;UBERON:0004573,4.24e-07,33;UBERON:0004571,4.24e-07,33;UBERON:0002385,5.84e-07,64;UBERON:0001015,5.84e-07,64;UBERON:0000383,5.84e-07,64 | |||
|phase1_expression=0.54503513781167,2.14100523890983,0.845726424575827,2.00146596706261,0.893922188854576,0,2.53299878168311,0,2.08948502559871,0.245733936501509,0,0,0.263766978228454,1.73272894144065,1.98838425436749,2.6893005858071,1.80808358407193,3.65155045193687,1.95173119516203,0.246242116153576,1.22400414746552,0.313454721478088,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32592226663359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0.670700859703636,0.12786256184353,0.361439152384566,1.50401373190767,2.462390822334,0.795285947051099,1.45990461090791,0.0945348171640679,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33472061276467,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.993943903390637,0.506522046658319,0.662045904066094,4.58938593198102,1.06400514659507,0,0,0.74000264525148,0.311211035399766,0.269421344139376,0.326923806226917,0.756787138224657,1.72852777344,0,2.80944069147288,1.1409436430889,2.24173020827702,0.704606991862589,0.971237666208789,0.421352420106746,1.42907919878425,2.45668634623536,0.929932030581889,0,6.18167323196392,2.73048408581408,3.59309070908119,0.505008341862199,0.500474079487857,0,0.877955241761676,2.45190236639216,0.751190294532984,0.226864366320042,2.33206526395521,1.70845911054854,1.90738711043606,3.00091096084402,1.13357782162283,0.515281080091258,0.744467425326359,2.36286865137773,0.68205903612839,1.26216887122057,1.01254888506529,1.77810662500693,2.13005755509969,1.0075209822764,0.339121184620975,0,0,0,0,0,0.116193942869518,0,0,0,1.56449532329816,9.00537313470039,0,0.928735856063958,2.16563844500876,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0.4115740113314,5.88034845542168,0,0,0,0,0,0,0,0,0,0,0.977424915930974,0,0,0.231860809950154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0.514137463516618,0,0,0.112131084345361,0,0.2933531432838,0.646358578788889,14.3062578340753,4.22651376278,1.86156681609409,0,0.257207374262142,0,0.266422179016099,0.857867961948885,2.17048642156577,0,0.65147236858747,1.42156779497018,0.791951872933429,0.602878754119172,0,0,0,0,0,0.479249710983165,0,0,1.01346914667305,1.64381058040307,0.358121926479791,0,0,0.215627574859517,0.128343036279748,0,0,0.773288812777695,0,0,0,0,0,2.33113834266366,3.00102312635806,1.62759014219841,3.11956292296211,1.78428988797162,0.630809660135739,0.702848489956279,0.902838299183157,0,0,1.99267679560631,0.921845842708516,1.56390506042549,1.37060810223918,1.37257369524342,0,0,0,0,0,0,0.496215615637554,0.61384789315225,3.08726103876381,1.02511319404561,0,0.965123526861645,0,3.85524234506639,4.97172830876756,0.739144404124282,3.11552657510173,4.41599438147845,0,0,0,1.03333003348146,2.91345868810747,2.75361271414791,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0,1.14853107599234,0,1.6068392984416,1.64340221096607,0.462145851343933,1.68854042198743,0.275673144969061,0.966782203814463,2.17525040871343,0.767039646744908,0.979352392114111,0,0,0,0,0.929691098594572,3.77774816196768,0.6970372701606,1.54016790088044,0.532306030317022,0,1.48259375283136,0.286249773483982,0.372158369359667,0,1.14378116354295,0.511795582622668,0.855877976067841,0,2.35484592059769,0.719489830333259,0.54907405947211,0,0.808729926293264,1.58510321173008,0.421258456238981,0,1.94970791705028,2.11300293513511,0.682499557039929,1.1312434556297,2.26016233240486,0.551365343546124,1.32687795048244,0.876901770507525,0.578775534266688,0.655894752046633,0.405820753925408,0,0,0.430234056612155,0.196498082026242,0,0.354761064070598,2.74439925886963,2.63435914367922,0,2.0996083214699,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0.191505370132367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0,0,0.23874448473769,0,0,0,0,0,0,0.211125408127993,0.19924798825107,0,0,0,0,2.48831670129446,0,0,0,0.591860433821602,0,0,0,0,0,0,0,0,0,0,0,0,0,0.347249989866585,0,0,0,0,0,0,0,0,0.615602068030377,0.227884111694002,0,0,0,0,0.549585560411174,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.265372693510018,0,0,0,0,0,0,0,0,0,0,0.394584402849391,0,0.30607276163049,0.126373159256976,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0.698906672968121,0,0,0,0,0.387956065953678,0,0.225980740780532,0.137041924646751,0,0,0,0,0.426905989478705,0.999048047910651,0,0,0,0,0,0,0.135904206073614,0.209205692624666,0.101998217636322,0.288950589901519,0,0,0,0,0,0.837847203816763,0,0.717873024576814,0,0,0.223171457441873,0.134366944973453,1.08089965062721,0,0,0,0,0,0,0,0.136203406111576,0.321506296930038,0.412618309791701,0.415440338029185,0,0,0,0,0.0788057072991982,0.0524545881349981,0,0,0,0.714695326373367,0,0,1.08599920350743,0,0.326587360109409,0,0,1.02232813071253,0.113312091520126,0,0,0,0.13223260174269,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0,0,1.17632909849086,0,0,1.94031243752936,2.33713309847224,2.77402930751307,1.325821036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| ||
|short_description=p26@COL6A2 | |||
}} | }} |
Latest revision as of 23:07, 18 September 2015
Short description: | p26@COL6A2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_26_at_COL6A2_5end |
Coexpression cluster: | C198_Mesenchymal_Hair_Hepatic_Fibroblast_Smooth_tenocyte_Pericytes |
Association with transcript: | -384bp_to_uc002zic.1_5end |
EntrezGene: | COL6A2 |
HGNC: | 2212 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.08e-17 | 76 |
multi fate stem cell | 6.48e-15 | 427 |
somatic stem cell | 2.28e-14 | 433 |
stem cell | 1.15e-13 | 441 |
connective tissue cell | 2.96e-12 | 361 |
skin fibroblast | 5.58e-11 | 23 |
mesenchymal stem cell of adipose | 7.20e-11 | 8 |
stromal cell | 1.61e-09 | 28 |
mesenchymal cell | 5.35e-09 | 354 |
motile cell | 1.66e-07 | 386 |
muscle precursor cell | 2.16e-07 | 58 |
myoblast | 2.16e-07 | 58 |
multi-potent skeletal muscle stem cell | 2.16e-07 | 58 |
vascular associated smooth muscle cell | 2.44e-07 | 32 |
fibrocyte | 2.85e-07 | 3 |
tendon cell | 2.85e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 1.16e-08 | 5 |
myotonic disease | 1.16e-08 | 5 |
muscle tissue disease | 1.16e-08 | 5 |
myopathy | 1.16e-08 | 5 |
muscular disease | 1.16e-08 | 5 |
myotonic dystrophy | 1.16e-08 | 5 |
ovarian cancer | 1.44e-08 | 14 |