FFCP PHASE1:Hg19::chr14:107281429..107281433,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=5656 | |HGNC=5656 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-177bp_to_ENST00000522457_5end | |association_with_transcript=-177bp_to_ENST00000522457_5end | ||
|cluster_id=chr14:107281429..107281433,- | |||
|coexpression_cluster_id=C218 | |coexpression_cluster_id=C218 | ||
|description=CAGE_peak_1_at_IGHV4-80_5end | |description=CAGE_peak_1_at_IGHV4-80_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000945!3.09e-13!24;CL:0000826!3.09e-13!24;CL:0000946!2.02e-08!1;CL:0000786!2.02e-08!1;CL:0000980!2.02e-08!1 | |ontology_enrichment_celltype=CL:0000945!3.09e-13!24;CL:0000826!3.09e-13!24;CL:0000946!2.02e-08!1;CL:0000786!2.02e-08!1;CL:0000980!2.02e-08!1 | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0001045;1.15e-29;1 | |ontology_enrichment_development_v019=UBERON:0001045;1.15e-29;1 | ||
|ontology_enrichment_disease=DOID:0060058!3.21e-11!10;DOID:2355!3.83e-08!1 | |ontology_enrichment_disease=DOID:0060058!3.21e-11!10;DOID:2355!3.83e-08!1 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.57e-14!115;UBERON:0001154!1.05e-08!1;UBERON:0001153!1.05e-08!1;UBERON:0000029!1.22e-08!1;UBERON:0002372!1.31e-08!1;UBERON:0001961!1.31e-08!1;UBERON:0001744!1.31e-08!1;UBERON:0001735!1.31e-08!1;UBERON:0002171!1.75e-08!1;UBERON:0006518!1.75e-08!1;UBERON:0008949!1.75e-08!1;UBERON:0000101!1.75e-08!1;UBERON:0002167!1.75e-08!1;UBERON:0002363!6.24e-08!1;UBERON:0007647!6.24e-08!1;UBERON:0010115!6.24e-08!1 | |ontology_enrichment_uberon=UBERON:0007023!3.57e-14!115;UBERON:0001154!1.05e-08!1;UBERON:0001153!1.05e-08!1;UBERON:0000029!1.22e-08!1;UBERON:0002372!1.31e-08!1;UBERON:0001961!1.31e-08!1;UBERON:0001744!1.31e-08!1;UBERON:0001735!1.31e-08!1;UBERON:0002171!1.75e-08!1;UBERON:0006518!1.75e-08!1;UBERON:0008949!1.75e-08!1;UBERON:0000101!1.75e-08!1;UBERON:0002167!1.75e-08!1;UBERON:0002363!6.24e-08!1;UBERON:0007647!6.24e-08!1;UBERON:0010115!6.24e-08!1 | ||
|ontology_enrichment_uberon_v019=UBERON:0001154;1.15e-29;1!UBERON:0001153;1.15e-29;1!UBERON:0009854;1.15e-29;1!UBERON:0002372;2.73e-29;1!UBERON:0000029;2.73e-29;1!UBERON:0001961;2.73e-29;1!UBERON:0001744;2.73e-29;1!UBERON:0001042;2.73e-29;1!UBERON:0001735;2.73e-29;1!UBERON:0006562;2.21e-15;2!UBERON:0001155;1.05e-13;9!UBERON:0004921;1.84e-12;33!UBERON:0002465;2.98e-12;10!UBERON:0000059;2.13e-11;11!UBERON:0002106;1.04e-10;3!UBERON:0002405;4.25e-10;27!UBERON:0009856;1.89e-08;4!UBERON:0001007;1.59e-07;81!UBERON:0000160;2.48e-07;17!UBERON:0004907;5.23e-07;5!UBERON:0000161;6.19e-07;19!UBERON:0000166;6.19e-07;19!UBERON:0004177;6.21e-07;5!UBERON:0005057;6.21e-07;5!UBERON:0002193;7.97e-07;42 | |ontology_enrichment_uberon_v019=UBERON:0001154;1.15e-29;1!UBERON:0001153;1.15e-29;1!UBERON:0009854;1.15e-29;1!UBERON:0002372;2.73e-29;1!UBERON:0000029;2.73e-29;1!UBERON:0001961;2.73e-29;1!UBERON:0001744;2.73e-29;1!UBERON:0001042;2.73e-29;1!UBERON:0001735;2.73e-29;1!UBERON:0006562;2.21e-15;2!UBERON:0001155;1.05e-13;9!UBERON:0004921;1.84e-12;33!UBERON:0002465;2.98e-12;10!UBERON:0000059;2.13e-11;11!UBERON:0002106;1.04e-10;3!UBERON:0002405;4.25e-10;27!UBERON:0009856;1.89e-08;4!UBERON:0001007;1.59e-07;81!UBERON:0000160;2.48e-07;17!UBERON:0004907;5.23e-07;5!UBERON:0000161;6.19e-07;19!UBERON:0000166;6.19e-07;19!UBERON:0004177;6.21e-07;5!UBERON:0005057;6.21e-07;5!UBERON:0002193;7.97e-07;42 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001154,9.99e-30,1;UBERON:0001153,9.99e-30,1;UBERON:0001045,9.99e-30,1;UBERON:0000029,1.78e-29,1;UBERON:0002372,2.37e-29,1;UBERON:0001961,2.37e-29,1;UBERON:0001744,2.37e-29,1;UBERON:0001735,2.37e-29,1;UBERON:0001155,1.02e-13,9;UBERON:0002465,2.66e-12,10;UBERON:0000059,2.07e-11,11;UBERON:0002106,1.20e-10,3;UBERON:0004854,1.20e-10,3;UBERON:0009034,1.20e-10,3;UBERON:0002095,1.20e-10,3;UBERON:0004782,1.20e-10,3;UBERON:0003281,1.20e-10,3;UBERON:0009664,1.20e-10,3;UBERON:0002296,1.20e-10,3;UBERON:0005602,1.20e-10,3;UBERON:0001179,1.20e-10,3;UBERON:0006293,1.20e-10,3;UBERON:0005409,1.50e-10,25;UBERON:0007023,3.49e-09,114;UBERON:0000160,2.44e-07,17;UBERON:0004907,5.08e-07,5 | |||
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|short_description=p1@IGHV4-80 | |short_description=p1@IGHV4-80 | ||
}} | }} |
Latest revision as of 23:06, 18 September 2015
Short description: | p1@IGHV4-80 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_IGHV4-80_5end |
Coexpression cluster: | C218_tonsil_lymph_CD19_spleen_colon_appendix_salivary |
Association with transcript: | -177bp_to_ENST00000522457_5end |
EntrezGene: | NA |
HGNC: | 5656 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vermiform appendix | 9.99e-30 | 1 |
caecum | 9.99e-30 | 1 |
midgut | 9.99e-30 | 1 |
lymph node | 1.78e-29 | 1 |
tonsil | 2.37e-29 | 1 |
mucosa-associated lymphoid tissue | 2.37e-29 | 1 |
lymphoid tissue | 2.37e-29 | 1 |
tonsillar ring | 2.37e-29 | 1 |
colon | 1.02e-13 | 9 |
lymphoid system | 2.66e-12 | 10 |
large intestine | 2.07e-11 | 11 |
spleen | 1.20e-10 | 3 |
gastrointestinal system mesentery | 1.20e-10 | 3 |
stomach region | 1.20e-10 | 3 |
mesentery | 1.20e-10 | 3 |
gastrointestinal system serosa | 1.20e-10 | 3 |
mesentery of stomach | 1.20e-10 | 3 |
gut mesentery | 1.20e-10 | 3 |
dorsal mesentery | 1.20e-10 | 3 |
dorsal mesogastrium | 1.20e-10 | 3 |
peritoneal cavity | 1.20e-10 | 3 |
spleen primordium | 1.20e-10 | 3 |
gastrointestinal system | 1.50e-10 | 25 |
adult organism | 3.49e-09 | 114 |
intestine | 2.44e-07 | 17 |
lower digestive tract | 5.08e-07 | 5 |