FFCP PHASE1:Hg19::chr21:47545905..47545936,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr21:47545905..47545936,+
|short_description=p23@COL6A2
|description=CAGE_peak_23_at_COL6A2_5end
|association_with_transcript=-467bp_to_uc002zic.1_5end
|Entre...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1292 | |EntrezGene=1292 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=2212 | |HGNC=2212 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-467bp_to_uc002zic.1_5end | |||
|cluster_id=chr21:47545905..47545936,+ | |||
|coexpression_cluster_id=C198 | |||
|description=CAGE_peak_23_at_COL6A2_5end | |||
|id=chr21:47545905..47545936,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.32e-44!180;CL:0000057!4.82e-29!75;CL:0000680!1.26e-20!57;CL:0000056!1.26e-20!57;CL:0000355!1.26e-20!57;CL:0000187!3.58e-20!54;CL:0000183!3.63e-20!59;CL:0000393!4.05e-17!60;CL:0000211!4.05e-17!60;CL:0000192!2.46e-15!42;CL:0000514!2.46e-15!42;CL:0000048!7.49e-13!430;CL:0000723!6.72e-12!436;CL:0002620!1.46e-11!23;CL:0000034!2.43e-11!444;CL:0000359!7.03e-11!32;CL:0002371!1.89e-07!591;CL:0000222!1.94e-07!119;CL:0000499!3.99e-07!27 | |||
|ontology_enrichment_celltype_v019=CL:0002620;4.02e-12;23!CL:0000187;3.19e-10;55!CL:0000359;2.26e-09;32!CL:0000192;2.46e-09;43!CL:0000393;6.38e-09;61!CL:0000211;6.38e-09;61!CL:0000499;1.26e-08;28!CL:0000057;1.54e-08;73!CL:0002570;2.73e-08;8!CL:0000723;3.42e-07;61!CL:0002320;9.00e-07;188!CL:0000134;9.38e-07;55!CL:0002595;9.50e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,6.73e-22,76;CL:0000048,9.95e-18,427;CL:0000187,2.39e-17,55;CL:0000723,5.08e-17,433;CL:0000034,4.13e-16,441;CL:0000680,6.41e-16,58;CL:0000056,6.41e-16,58;CL:0000355,6.41e-16,58;CL:0000393,1.21e-14,61;CL:0000211,1.21e-14,61;CL:0000192,9.90e-13,43;CL:0000514,9.90e-13,43;CL:0002620,4.19e-12,23;CL:0002320,2.42e-10,361;CL:0000359,1.57e-09,32;CL:0000499,9.89e-09,28;CL:0002570,2.99e-08,8;CL:0000134,1.58e-07,354;CL:0002595,7.81e-07,5 | |||
|ontology_enrichment_development_v019=CL:0000514;2.46e-09;43!CL:0000355;2.12e-08;58 | |||
|ontology_enrichment_disease=DOID:2394!1.70e-07!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!1.58e-25!83;UBERON:0002329!1.58e-25!83;UBERON:0003077!1.58e-25!83;UBERON:0003059!1.58e-25!83;UBERON:0007282!1.58e-25!83;UBERON:0009618!1.58e-25!83;UBERON:0007285!1.58e-25!83;UBERON:0004290!4.25e-24!70;UBERON:0002385!5.73e-21!63;UBERON:0001015!5.73e-21!63;UBERON:0000383!5.73e-21!63;UBERON:0001134!1.25e-20!61;UBERON:0002036!1.25e-20!61;UBERON:0003082!1.25e-20!61;UBERON:0000486!2.68e-20!82;UBERON:0005256!1.01e-18!143;UBERON:0002100!4.95e-13!216;UBERON:0003102!1.90e-12!95;UBERON:0002199!1.42e-11!45;UBERON:0002416!1.42e-11!45;UBERON:0000475!8.86e-11!365;UBERON:0003104!4.93e-09!238;UBERON:0009142!4.93e-09!238;UBERON:0001013!1.57e-08!14;UBERON:0002097!1.85e-08!40;UBERON:0000490!9.05e-08!138;UBERON:0004872!1.18e-07!84;UBERON:0001637!5.91e-07!42;UBERON:0003509!5.91e-07!42;UBERON:0004572!5.91e-07!42;UBERON:0000481!9.50e-07!347 | |||
|ontology_enrichment_uberon_v019=UBERON:0001013;1.22e-10;14!UBERON:0002199;6.74e-10;46!UBERON:0002416;6.74e-10;46!UBERON:0004905;9.72e-09;8!UBERON:0000982;9.72e-09;8!UBERON:0004770;9.72e-09;8!UBERON:0002072;1.62e-08;5!UBERON:0011135;2.48e-08;5!UBERON:0002216;2.48e-08;5!UBERON:0011134;2.48e-08;5!UBERON:0002209;2.48e-08;5!UBERON:0002213;2.48e-08;5!UBERON:0007844;2.48e-08;5!UBERON:0011138;2.48e-08;5!UBERON:0001130;2.48e-08;5!UBERON:0001066;2.48e-08;5!UBERON:0001468;2.48e-08;5!UBERON:0002384;3.45e-08;198!UBERON:0003102;6.25e-08;50!UBERON:0002097;2.87e-07;41!UBERON:0003834;9.50e-07;5!UBERON:0001533;9.50e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007524,5.05e-17,73;UBERON:0002329,9.34e-17,71;UBERON:0003059,9.34e-17,71;UBERON:0007282,9.34e-17,71;UBERON:0004290,9.34e-17,71;UBERON:0009618,9.34e-17,71;UBERON:0003077,2.32e-16,72;UBERON:0007285,2.32e-16,72;UBERON:0003104,3.81e-15,160;UBERON:0009142,3.81e-15,160;UBERON:0007503,4.12e-15,78;UBERON:0000486,1.20e-14,83;UBERON:0002199,1.47e-14,46;UBERON:0002416,1.47e-14,46;UBERON:0005256,2.36e-14,122;UBERON:0001134,3.03e-14,62;UBERON:0002036,3.03e-14,62;UBERON:0003082,3.03e-14,62;UBERON:0002385,1.71e-13,64;UBERON:0001015,1.71e-13,64;UBERON:0000383,1.71e-13,64;UBERON:0003102,2.73e-12,99;UBERON:0001013,8.79e-11,14;UBERON:0002384,2.79e-10,371;UBERON:0002097,7.51e-10,41;UBERON:0004905,6.69e-09,8;UBERON:0000982,6.69e-09,8;UBERON:0004770,6.69e-09,8;UBERON:0002072,1.35e-08,5;UBERON:0011135,2.51e-08,5;UBERON:0002216,2.51e-08,5;UBERON:0011134,2.51e-08,5;UBERON:0002209,2.51e-08,5;UBERON:0002213,2.51e-08,5;UBERON:0005856,2.51e-08,5;UBERON:0005866,2.51e-08,5;UBERON:0005863,2.51e-08,5;UBERON:0007844,2.51e-08,5;UBERON:0011138,2.51e-08,5;UBERON:0001130,2.51e-08,5;UBERON:0001066,2.51e-08,5;UBERON:0001468,2.51e-08,5;UBERON:0000490,1.06e-07,148;UBERON:0002100,3.26e-07,199;UBERON:0003834,7.81e-07,5;UBERON:0001533,7.81e-07,5 | |||
|phase1_expression=0.54503513781167,2.14100523890983,0.422863212287913,2.00146596706261,1.78784437770915,1.74467704820074,5.06599756336621,4.42203911398782,2.87304191019822,0.245733936501509,0,0,0,3.34169152992126,4.30816588446291,5.3786011716142,4.21886169616784,1.46062018077475,3.41552959153355,0.246242116153576,0.204000691244253,0.940364164434263,0,0,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0.144824403882799,4.87613732627923,0.670700859703636,0.383587685530591,1.44575660953827,1.00267582127178,4.20054904986389,1.5905718941022,1.45990461090791,0.0945348171640679,0.221729397462564,0.351339142772504,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49091585508596,1.39293562831038,0.794455084879313,4.87622255272983,1.06400514659507,2.24271040056923,0,1.48000529050296,0,0.538842688278752,0.653847612453835,0.908144565869588,1.72852777344,0.468642863667593,2.49728061464256,1.1409436430889,2.54062756938062,0.822041490506354,0.647491777472526,0.561803226808994,0.816616685019573,2.45668634623536,1.44656093646072,3.56400857184616,4.20353779773547,0.910161361938026,2.87447256726495,0.336672227908132,0.750711119231785,0.554128230968366,0.438977620880838,2.45190236639216,2.40380894250555,0.680593098960126,1.97328599257748,4.27114777637135,3.17897851739343,2.70081986475962,0.92747276314595,1.8034837803194,1.11670113798954,1.5189869901714,1.36411807225678,1.26216887122057,1.56484827691909,2.26304479546337,4.26011511019937,1.41052937518696,1.01736355386293,0,0,0,0,0.397589304964456,0,0.518305275076852,0,0,6.25798129319264,11.5783368874719,0,1.85747171212792,4.33127689001751,0,0,0,0,0,0,0,0,0,0,0,1.2347220339942,1.47008711385542,0,0,0.590789906681404,0,0,0,0,0,0,0,0.325808305310325,3.11980435583874,1.44331342025273,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0.411309970813294,0,0.285826432630578,0.448524337381443,0.43596006883328,0.2933531432838,0.387815147273333,21.4593867511129,3.381211010224,0.797814349754612,1.04007436911366,0.514414748524284,0,0.266422179016099,1.85871391755592,2.17048642156577,0,0.977208552881205,1.06617584622764,0,0,0,0,0,0,0,1.19812427745791,2.29723871668228,0,0.434343920002738,0.61642896765115,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,3.18997878469764,4.50153468953709,4.88277042659524,2.70362119990049,3.21172179834891,0.315404830067869,1.05427273493442,0.601892199455438,0,1.03473071292505,3.32112799267718,0.368738337083406,2.86715927744673,2.34961388955289,2.05886054286514,0,0,0,0,0,0.907170879989041,0.992431231275107,0.767309866440312,1.12264037773229,0.896974044789907,2.55853624533352,0.482561763430822,0,6.16838775210622,5.50441348470694,1.14978018419333,4.15403543346897,3.83494248917865,0.120859449591622,0,0,0.803701137152247,5.46273504020151,3.93373244878272,0,0,1.56869953835371,0,0,1.13733384070897,0,0.215915916102139,0,0,0.501689773854853,0,0,0.223874754722178,0,0,0,0,0,0.103041011647722,0.0915694648183434,0,0.574265537996172,0.650060246036521,1.6068392984416,3.963499449977,1.3864375540318,1.84204409671355,1.37836572484531,1.28904293841928,3.91545073568417,0.93749290157711,1.86967274858148,0,0,0,0,0,4.09256050879832,0,0.308033580176089,1.06461206063404,0,1.8532421910392,0,0.372158369359667,1.2655176988749,1.14378116354295,1.02359116524534,0.855877976067841,0.95460974377781,0.78494864019923,0.899362287916574,1.64722217841633,0.706874414074119,0.404364963146632,1.58510321173008,0.842516912477962,0.48763373908959,2.68084838594413,2.11300293513511,1.77449884830381,3.25232493493539,1.13008116620243,1.65409603063837,3.98063385144732,1.31535265576129,1.73632660280006,1.9676842561399,0.202910376962704,0.92947049429925,1.12678241012897,0.717056761020258,1.3754865741837,1.07001315444375,1.06428319221179,2.74439925886963,1.64647446479951,0.379473173765715,0.699869440489966,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223676107892416,0,0,0,0,0,0,0,0,0.439524537815682,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0.996239941255349,0.276283915531148,0,0.102268682502155,0,1.24415835064723,0,0,0,1.08507746200627,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0.344743373241465,0,0,0,0,0,0,0,0.219385397153973,0,0,1.15425387755696,0.227884111694002,0,0,0,0.638002319463839,0.641183153813036,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0.265372693510018,0,0,0,0,0,0.802577647298789,0,0,0,0,0.394584402849391,0,0.30607276163049,0.252746318513952,0,0,0,0.330991955875499,0.627865836814451,0,0,0,0,0,0,1.7472666824203,0.343972064943233,0,0,0,0.484945082442097,0.0882561266915003,0.677942222341597,0.274083849293502,0,0,0,0,1.06726497369676,0.39961921916426,0.144090417154106,0,0,0,0.124252535565433,0,0,0,0.203996435272644,0.577901179803038,0,0,0,0.859530882839914,0,0.837847203816763,0.687481272035051,0,0.199679000498991,0.858452096273142,0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| ||
|short_description=p23@COL6A2 | |||
}} | }} |
Latest revision as of 23:06, 18 September 2015
Short description: | p23@COL6A2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_23_at_COL6A2_5end |
Coexpression cluster: | C198_Mesenchymal_Hair_Hepatic_Fibroblast_Smooth_tenocyte_Pericytes |
Association with transcript: | -467bp_to_uc002zic.1_5end |
EntrezGene: | COL6A2 |
HGNC: | 2212 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 6.73e-22 | 76 |
multi fate stem cell | 9.95e-18 | 427 |
muscle cell | 2.39e-17 | 55 |
somatic stem cell | 5.08e-17 | 433 |
stem cell | 4.13e-16 | 441 |
muscle precursor cell | 6.41e-16 | 58 |
myoblast | 6.41e-16 | 58 |
multi-potent skeletal muscle stem cell | 6.41e-16 | 58 |
electrically responsive cell | 1.21e-14 | 61 |
electrically active cell | 1.21e-14 | 61 |
smooth muscle cell | 9.90e-13 | 43 |
smooth muscle myoblast | 9.90e-13 | 43 |
skin fibroblast | 4.19e-12 | 23 |
connective tissue cell | 2.42e-10 | 361 |
vascular associated smooth muscle cell | 1.57e-09 | 32 |
stromal cell | 9.89e-09 | 28 |
mesenchymal stem cell of adipose | 2.99e-08 | 8 |
mesenchymal cell | 1.58e-07 | 354 |
smooth muscle cell of the subclavian artery | 7.81e-07 | 5 |