FFCP PHASE1:Hg19::chr11:63057362..63057382,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=387775 | |EntrezGene=387775 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18057 | |HGNC=18057 | ||
|TSSclassifier=strong | |||
|UniProt=E9PMM0 | |UniProt=E9PMM0 | ||
|association_with_transcript=0bp_to_ENST00000533483,uc001nwu.3_5end | |association_with_transcript=0bp_to_ENST00000533483,uc001nwu.3_5end | ||
|cluster_id=chr11:63057362..63057382,+ | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_3_at_SLC22A10_5end | |description=CAGE_peak_3_at_SLC22A10_5end | ||
|id=chr11:63057362..63057382,+ | |id=chr11:63057362..63057382,+ | ||
|ontology_enrichment_celltype=CL:0000181!2.05e-24!12;CL:0000417!2.05e-24!12;CL:0000668!2.05e-24!12;CL:0000414!2.05e-24!12;CL:0000412!2.05e-24!12;CL:0000182!2.05e-24!12;CL:0000223!7.42e-11!59;CL:0002195!2.99e-10!2;CL:0002571!2.99e-10!2 | |ontology_enrichment_celltype=CL:0000181!2.05e-24!12;CL:0000417!2.05e-24!12;CL:0000668!2.05e-24!12;CL:0000414!2.05e-24!12;CL:0000412!2.05e-24!12;CL:0000182!2.05e-24!12;CL:0000223!7.42e-11!59;CL:0002195!2.99e-10!2;CL:0002571!2.99e-10!2 | ||
|ontology_enrichment_celltype_v019=CL:0000182;6.55e-22;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,6.33e-22,12 | |||
|ontology_enrichment_development_v019=UBERON:0004161;3.39e-11;11!UBERON:0009497;1.26e-09;13 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!6.87e-46!19;UBERON:0006925!6.87e-46!19;UBERON:0008836!6.87e-46!19;UBERON:0008835!1.26e-39!22;UBERON:0003894!1.26e-39!22;UBERON:0009854!6.70e-38!23;UBERON:0007499!7.32e-35!25;UBERON:0009497!7.32e-35!25;UBERON:0000015!7.32e-35!25;UBERON:0002423!7.32e-35!25;UBERON:0006235!7.32e-35!25;UBERON:0004161!7.32e-35!25;UBERON:0005057!1.62e-33!26;UBERON:0009856!1.62e-33!26;UBERON:0002365!4.30e-28!31;UBERON:0002330!4.30e-28!31;UBERON:0002368!7.27e-25!35;UBERON:0003929!7.40e-21!54;UBERON:0000949!2.69e-19!45;UBERON:0005172!9.58e-16!55;UBERON:0005173!9.58e-16!55;UBERON:0002530!1.17e-14!59;UBERON:0002417!3.61e-14!61;UBERON:0000916!3.61e-14!61;UBERON:0005911!1.34e-13!82;UBERON:0001041!1.09e-08!98;UBERON:0004921!2.17e-08!129;UBERON:0004185!2.17e-08!129;UBERON:0004119!5.71e-08!169;UBERON:0000925!5.71e-08!169;UBERON:0006595!5.71e-08!169;UBERON:0005177!6.32e-08!107;UBERON:0000490!7.19e-08!138;UBERON:0009569!1.75e-07!113;UBERON:0002405!2.80e-07!115;UBERON:0003914!3.79e-07!118;UBERON:0001007!6.81e-07!155;UBERON:0001555!6.81e-07!155;UBERON:0007026!6.81e-07!155 | |ontology_enrichment_uberon=UBERON:0002107!6.87e-46!19;UBERON:0006925!6.87e-46!19;UBERON:0008836!6.87e-46!19;UBERON:0008835!1.26e-39!22;UBERON:0003894!1.26e-39!22;UBERON:0009854!6.70e-38!23;UBERON:0007499!7.32e-35!25;UBERON:0009497!7.32e-35!25;UBERON:0000015!7.32e-35!25;UBERON:0002423!7.32e-35!25;UBERON:0006235!7.32e-35!25;UBERON:0004161!7.32e-35!25;UBERON:0005057!1.62e-33!26;UBERON:0009856!1.62e-33!26;UBERON:0002365!4.30e-28!31;UBERON:0002330!4.30e-28!31;UBERON:0002368!7.27e-25!35;UBERON:0003929!7.40e-21!54;UBERON:0000949!2.69e-19!45;UBERON:0005172!9.58e-16!55;UBERON:0005173!9.58e-16!55;UBERON:0002530!1.17e-14!59;UBERON:0002417!3.61e-14!61;UBERON:0000916!3.61e-14!61;UBERON:0005911!1.34e-13!82;UBERON:0001041!1.09e-08!98;UBERON:0004921!2.17e-08!129;UBERON:0004185!2.17e-08!129;UBERON:0004119!5.71e-08!169;UBERON:0000925!5.71e-08!169;UBERON:0006595!5.71e-08!169;UBERON:0005177!6.32e-08!107;UBERON:0000490!7.19e-08!138;UBERON:0009569!1.75e-07!113;UBERON:0002405!2.80e-07!115;UBERON:0003914!3.79e-07!118;UBERON:0001007!6.81e-07!155;UBERON:0001555!6.81e-07!155;UBERON:0007026!6.81e-07!155 | ||
|ontology_enrichment_uberon_v019=UBERON:0002107;3.25e-37;19!UBERON:0006925;3.25e-37;19!UBERON:0002423;2.01e-28;25!UBERON:0002365;5.93e-23;31!UBERON:0002330;5.93e-23;31!UBERON:0002368;7.62e-20;33!UBERON:0000949;2.19e-14;43!UBERON:0005172;2.25e-10;52!UBERON:0005173;2.25e-10;52!UBERON:0002417;4.84e-08;58!UBERON:0000916;4.84e-08;58!UBERON:0002530;1.43e-07;57!UBERON:0001007;1.91e-07;81 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,3.25e-37,19;UBERON:0006925,3.25e-37,19;UBERON:0008836,3.25e-37,19;UBERON:0008835,3.20e-32,22;UBERON:0003894,3.20e-32,22;UBERON:0009854,7.61e-31,23;UBERON:0007499,2.01e-28,25;UBERON:0009497,2.01e-28,25;UBERON:0000015,2.01e-28,25;UBERON:0002423,2.01e-28,25;UBERON:0006235,2.01e-28,25;UBERON:0004161,2.01e-28,25;UBERON:0009856,2.38e-27,26;UBERON:0002365,5.06e-23,31;UBERON:0002330,5.06e-23,31;UBERON:0002368,1.90e-20,35;UBERON:0000949,5.31e-16,45;UBERON:0003929,2.12e-13,54;UBERON:0005172,2.12e-13,54;UBERON:0005173,2.12e-13,54;UBERON:0002530,2.70e-12,59;UBERON:0002417,4.27e-12,60;UBERON:0000916,4.27e-12,60;UBERON:0005911,6.22e-09,82;UBERON:0001041,1.96e-08,87;UBERON:0005177,2.68e-07,101 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.07020139287323,2.94848165003288,9.45263850690247,0,0.245976877086227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.58281408323817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.0378048745708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.05173127149315,1.32506888912221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.07020139287323,2.94848165003288,9.45263850690247,0,0.245976877086227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.58281408323817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.0378048745708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.05173127149315,1.32506888912221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p3@SLC22A10 | |short_description=p3@SLC22A10 | ||
}} | }} |
Latest revision as of 22:43, 18 September 2015
Short description: | p3@SLC22A10 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SLC22A10_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 0bp_to_ENST00000533483, uc001nwu.3_5end |
EntrezGene: | SLC22A10 |
HGNC: | 18057 |
UniProt: | E9PMM0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 6.33e-22 | 12 |
Ontology term | p-value | n |
---|---|---|
liver | 3.25e-37 | 19 |
digestive gland | 3.25e-37 | 19 |
liver bud | 3.25e-37 | 19 |
hepatic diverticulum | 3.20e-32 | 22 |
liver primordium | 3.20e-32 | 22 |
digestive tract diverticulum | 7.61e-31 | 23 |
epithelial sac | 2.01e-28 | 25 |
epithelium of foregut-midgut junction | 2.01e-28 | 25 |
anatomical boundary | 2.01e-28 | 25 |
hepatobiliary system | 2.01e-28 | 25 |
foregut-midgut junction | 2.01e-28 | 25 |
septum transversum | 2.01e-28 | 25 |
sac | 2.38e-27 | 26 |
exocrine gland | 5.06e-23 | 31 |
exocrine system | 5.06e-23 | 31 |
endocrine gland | 1.90e-20 | 35 |
endocrine system | 5.31e-16 | 45 |
gut epithelium | 2.12e-13 | 54 |
abdomen element | 2.12e-13 | 54 |
abdominal segment element | 2.12e-13 | 54 |
gland | 2.70e-12 | 59 |
abdominal segment of trunk | 4.27e-12 | 60 |
abdomen | 4.27e-12 | 60 |
endo-epithelium | 6.22e-09 | 82 |
foregut | 1.96e-08 | 87 |
trunk region element | 2.68e-07 | 101 |