FFCP PHASE1:Hg19::chr1:6546001..6546019,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57449 | |EntrezGene=57449 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29105 | |HGNC=29105 | ||
|TSSclassifier=strong | |||
|UniProt=F5H2R6,O94827 | |UniProt=F5H2R6,O94827 | ||
|association_with_transcript=0bp_to_ENST00000400913,ENST00000491384,ENST00000535966,NM_001042665,uc001ank.1_5end | |association_with_transcript=0bp_to_ENST00000400913,ENST00000491384,ENST00000535966,NM_001042665,uc001ank.1_5end | ||
|cluster_id=chr1:6546001..6546019,- | |||
|description=CAGE_peak_6_at_PLEKHG5_5end | |description=CAGE_peak_6_at_PLEKHG5_5end | ||
|id=chr1:6546001..6546019,- | |id=chr1:6546001..6546019,- | ||
|ontology_enrichment_celltype=CL:0002321!1.00e-18!248;CL:0000066!1.27e-18!254;CL:0000220!7.79e-18!246;CL:0002139!8.38e-15!24;CL:0000071!4.54e-14!18;CL:0002546!4.54e-14!18;CL:0000115!1.00e-13!35;CL:0002078!8.82e-13!44;CL:0000076!1.32e-09!62;CL:1000413!2.14e-08!9;CL:0000213!3.45e-08!57;CL:0000215!3.45e-08!57;CL:0000222!4.70e-08!119;CL:1000449!2.23e-07!16;CL:0002076!9.08e-07!43 | |ontology_enrichment_celltype=CL:0002321!1.00e-18!248;CL:0000066!1.27e-18!254;CL:0000220!7.79e-18!246;CL:0002139!8.38e-15!24;CL:0000071!4.54e-14!18;CL:0002546!4.54e-14!18;CL:0000115!1.00e-13!35;CL:0002078!8.82e-13!44;CL:0000076!1.32e-09!62;CL:1000413!2.14e-08!9;CL:0000213!3.45e-08!57;CL:0000215!3.45e-08!57;CL:0000222!4.70e-08!119;CL:1000449!2.23e-07!16;CL:0002076!9.08e-07!43 | ||
|ontology_enrichment_celltype_v019=CL:0002139;1.04e-19;24!CL:0000071;5.47e-19;18!CL:0000115;6.84e-17;36!CL:1000413;7.55e-17;9!CL:0002544;1.05e-11;6!CL:0002078;2.40e-11;45!CL:0002322;1.05e-08;5!CL:1000449;1.24e-08;15!CL:0000128;3.02e-08;7!CL:0000126;3.02e-08;7!CL:0000127;3.02e-08;7!CL:0000213;3.55e-08;58!CL:0000215;3.55e-08;58!CL:0000076;5.59e-08;63!CL:1000497;2.13e-07;17!CL:0002518;2.13e-07;17!CL:0002319;5.80e-07;25!CL:0002681;8.10e-07;12!CL:0002584;8.10e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,6.90e-20,24;CL:0000066,1.08e-19,253;CL:0000071,2.88e-19,18;CL:0002546,2.88e-19,18;CL:0000115,1.08e-18,36;CL:1000413,4.53e-17,9;CL:0002078,1.23e-16,45;CL:0002321,4.27e-14,250;CL:0000076,1.25e-13,63;CL:0002544,8.40e-12,6;CL:0000213,1.58e-11,58;CL:0000215,1.58e-11,58;CL:0002322,1.46e-08,5;CL:1000449,1.54e-08,15;CL:0000128,2.23e-08,7;CL:0000126,2.23e-08,7;CL:0000127,2.23e-08,7;CL:0002453,2.23e-08,7;CL:0000047,5.53e-08,8;CL:0000221,1.19e-07,72;CL:1000497,2.56e-07,17;CL:0002518,2.56e-07,17;CL:0002319,6.09e-07,25;CL:0000068,7.80e-07,3;CL:0000069,7.80e-07,3;CL:0000307,7.80e-07,3;CL:0000377,7.80e-07,3;CL:0002368,9.90e-07,13 | |||
|ontology_enrichment_development_v019=CL:0002546;5.47e-19;18 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000119!3.53e-25!312;UBERON:0000483!5.76e-25!309;UBERON:0000468!2.52e-15!659;UBERON:0004111!1.29e-14!241;UBERON:0001986!4.54e-14!18;UBERON:0004638!4.54e-14!18;UBERON:0004852!4.54e-14!18;UBERON:0000922!1.37e-13!612;UBERON:0000477!2.93e-13!286;UBERON:0000481!4.16e-13!347;UBERON:0000487!7.33e-13!22;UBERON:0000467!1.63e-12!625;UBERON:0000480!2.29e-12!626;UBERON:0000025!4.55e-12!194;UBERON:0000475!6.48e-12!365;UBERON:0006914!3.19e-11!25;UBERON:0002050!4.29e-11!605;UBERON:0005423!4.29e-11!605;UBERON:0000923!9.37e-11!604;UBERON:0005291!9.37e-11!604;UBERON:0006598!9.37e-11!604;UBERON:0002532!9.37e-11!604;UBERON:0002049!3.61e-10!79;UBERON:0007798!3.61e-10!79;UBERON:0003914!4.58e-10!118;UBERON:0000064!8.91e-09!219;UBERON:0003064!1.26e-08!37;UBERON:0000490!1.63e-08!138;UBERON:0003915!2.14e-08!9;UBERON:0004700!2.14e-08!9;UBERON:0001917!2.14e-08!9;UBERON:0004872!3.88e-08!84;UBERON:0004876!7.24e-08!20;UBERON:0004535!1.03e-07!110;UBERON:0001009!1.50e-07!113;UBERON:0000055!1.80e-07!69;UBERON:0006555!2.00e-07!17;UBERON:0005103!2.00e-07!17;UBERON:0000083!2.00e-07!17;UBERON:0009201!2.00e-07!17;UBERON:0004819!2.00e-07!17;UBERON:0006553!2.00e-07!17;UBERON:0003074!2.00e-07!17;UBERON:0003060!2.00e-07!17;UBERON:0004211!2.23e-07!16;UBERON:0001285!2.23e-07!16;UBERON:0007684!2.23e-07!16;UBERON:0003220!2.23e-07!16;UBERON:0004208!2.23e-07!16;UBERON:0004121!2.88e-07!169;UBERON:0003103!3.40e-07!69;UBERON:0000970!3.45e-07!20;UBERON:0001981!3.54e-07!60;UBERON:0007500!3.54e-07!60;UBERON:0004537!3.54e-07!60;UBERON:0006965!3.54e-07!60;UBERON:0000020!4.23e-07!23;UBERON:0000019!6.86e-07!19;UBERON:0000047!6.86e-07!19;UBERON:0004088!6.86e-07!19;UBERON:0003072!6.86e-07!19;UBERON:0003071!6.86e-07!19;UBERON:0004128!6.86e-07!19;UBERON:0006554!7.24e-07!44 | |ontology_enrichment_uberon=UBERON:0000119!3.53e-25!312;UBERON:0000483!5.76e-25!309;UBERON:0000468!2.52e-15!659;UBERON:0004111!1.29e-14!241;UBERON:0001986!4.54e-14!18;UBERON:0004638!4.54e-14!18;UBERON:0004852!4.54e-14!18;UBERON:0000922!1.37e-13!612;UBERON:0000477!2.93e-13!286;UBERON:0000481!4.16e-13!347;UBERON:0000487!7.33e-13!22;UBERON:0000467!1.63e-12!625;UBERON:0000480!2.29e-12!626;UBERON:0000025!4.55e-12!194;UBERON:0000475!6.48e-12!365;UBERON:0006914!3.19e-11!25;UBERON:0002050!4.29e-11!605;UBERON:0005423!4.29e-11!605;UBERON:0000923!9.37e-11!604;UBERON:0005291!9.37e-11!604;UBERON:0006598!9.37e-11!604;UBERON:0002532!9.37e-11!604;UBERON:0002049!3.61e-10!79;UBERON:0007798!3.61e-10!79;UBERON:0003914!4.58e-10!118;UBERON:0000064!8.91e-09!219;UBERON:0003064!1.26e-08!37;UBERON:0000490!1.63e-08!138;UBERON:0003915!2.14e-08!9;UBERON:0004700!2.14e-08!9;UBERON:0001917!2.14e-08!9;UBERON:0004872!3.88e-08!84;UBERON:0004876!7.24e-08!20;UBERON:0004535!1.03e-07!110;UBERON:0001009!1.50e-07!113;UBERON:0000055!1.80e-07!69;UBERON:0006555!2.00e-07!17;UBERON:0005103!2.00e-07!17;UBERON:0000083!2.00e-07!17;UBERON:0009201!2.00e-07!17;UBERON:0004819!2.00e-07!17;UBERON:0006553!2.00e-07!17;UBERON:0003074!2.00e-07!17;UBERON:0003060!2.00e-07!17;UBERON:0004211!2.23e-07!16;UBERON:0001285!2.23e-07!16;UBERON:0007684!2.23e-07!16;UBERON:0003220!2.23e-07!16;UBERON:0004208!2.23e-07!16;UBERON:0004121!2.88e-07!169;UBERON:0003103!3.40e-07!69;UBERON:0000970!3.45e-07!20;UBERON:0001981!3.54e-07!60;UBERON:0007500!3.54e-07!60;UBERON:0004537!3.54e-07!60;UBERON:0006965!3.54e-07!60;UBERON:0000020!4.23e-07!23;UBERON:0000019!6.86e-07!19;UBERON:0000047!6.86e-07!19;UBERON:0004088!6.86e-07!19;UBERON:0003072!6.86e-07!19;UBERON:0003071!6.86e-07!19;UBERON:0004128!6.86e-07!19;UBERON:0006554!7.24e-07!44 | ||
|ontology_enrichment_uberon_v019=UBERON:0004638;5.47e-19;18!UBERON:0001986;5.47e-19;18!UBERON:0004852;5.47e-19;18!UBERON:0000487;5.99e-17;22!UBERON:0003915;7.55e-17;9!UBERON:0004700;7.55e-17;9!UBERON:0001917;7.55e-17;9!UBERON:0000490;1.77e-16;33!UBERON:0006914;2.12e-14;25!UBERON:0002037;1.34e-10;6!UBERON:0006554;4.97e-09;30!UBERON:0001008;4.97e-09;30!UBERON:0006555;1.24e-08;15!UBERON:0004819;1.24e-08;15!UBERON:0001285;1.24e-08;15!UBERON:0007684;1.24e-08;15!UBERON:0010371;6.68e-08;31!UBERON:0000486;5.32e-07;12!UBERON:0001225;8.10e-07;12!UBERON:0008987;8.10e-07;12!UBERON:0002680;8.52e-07;9!UBERON:0001895;8.52e-07;9 | |||
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| ||
|short_description=p6@PLEKHG5 | |short_description=p6@PLEKHG5 | ||
}} | }} |
Latest revision as of 22:19, 18 September 2015
Short description: | p6@PLEKHG5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_PLEKHG5_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000400913, ENST00000491384, ENST00000535966, NM_001042665, uc001ank.1_5end |
EntrezGene: | PLEKHG5 |
HGNC: | 29105 |
UniProt: | F5H2R6O94827 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 6.90e-20 | 24 |
epithelial cell | 1.08e-19 | 253 |
blood vessel endothelial cell | 2.88e-19 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.88e-19 | 18 |
endothelial cell | 1.08e-18 | 36 |
endothelial cell of artery | 4.53e-17 | 9 |
meso-epithelial cell | 1.23e-16 | 45 |
embryonic cell | 4.27e-14 | 250 |
squamous epithelial cell | 1.25e-13 | 63 |
aortic endothelial cell | 8.40e-12 | 6 |
lining cell | 1.58e-11 | 58 |
barrier cell | 1.58e-11 | 58 |
embryonic stem cell | 1.46e-08 | 5 |
epithelial cell of nephron | 1.54e-08 | 15 |
oligodendrocyte | 2.23e-08 | 7 |
macroglial cell | 2.23e-08 | 7 |
astrocyte | 2.23e-08 | 7 |
oligodendrocyte precursor cell | 2.23e-08 | 7 |
neuronal stem cell | 5.53e-08 | 8 |
ectodermal cell | 1.19e-07 | 72 |
kidney cell | 2.56e-07 | 17 |
kidney epithelial cell | 2.56e-07 | 17 |
neural cell | 6.09e-07 | 25 |
duct epithelial cell | 7.80e-07 | 3 |
branched duct epithelial cell | 7.80e-07 | 3 |
tracheal epithelial cell | 7.80e-07 | 3 |
tracheoblast | 7.80e-07 | 3 |
respiratory epithelial cell | 9.90e-07 | 13 |
Ontology term | p-value | n |
---|---|---|
blood vessel endothelium | 2.88e-19 | 18 |
endothelium | 2.88e-19 | 18 |
cardiovascular system endothelium | 2.88e-19 | 18 |
simple squamous epithelium | 2.90e-17 | 22 |
endothelial tube | 4.53e-17 | 9 |
arterial system endothelium | 4.53e-17 | 9 |
endothelium of artery | 4.53e-17 | 9 |
epithelium | 5.57e-15 | 306 |
squamous epithelium | 1.13e-14 | 25 |
cell layer | 1.19e-14 | 309 |
cerebellum | 5.33e-11 | 6 |
rhombic lip | 5.33e-11 | 6 |
anatomical conduit | 5.29e-10 | 240 |
embryo | 1.25e-09 | 592 |
tube | 8.45e-09 | 192 |
nephron epithelium | 1.54e-08 | 15 |
renal tubule | 1.54e-08 | 15 |
nephron tubule | 1.54e-08 | 15 |
nephron | 1.54e-08 | 15 |
uriniferous tubule | 1.54e-08 | 15 |
nephrogenic mesenchyme | 1.54e-08 | 15 |
excretory tube | 6.87e-08 | 16 |
kidney epithelium | 6.87e-08 | 16 |
developing anatomical structure | 1.04e-07 | 581 |
ecto-epithelium | 1.09e-07 | 104 |
urinary system structure | 3.68e-07 | 47 |
regional part of metencephalon | 4.76e-07 | 9 |
metencephalon | 4.76e-07 | 9 |
future metencephalon | 4.76e-07 | 9 |
renal system | 6.28e-07 | 48 |
urothelium | 8.16e-07 | 5 |