FFCP PHASE1:Hg19::chr5:79033461..79033496,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=202333 | |EntrezGene=202333 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14305 | |HGNC=14305 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-468bp_to_ENST00000506603_5end | |association_with_transcript=-468bp_to_ENST00000506603_5end | ||
|cluster_id=chr5:79033461..79033496,+ | |||
|coexpression_cluster_id=C9 | |coexpression_cluster_id=C9 | ||
|description=CAGE_peak_4_at_CMYA5_5end | |description=CAGE_peak_4_at_CMYA5_5end | ||
|id=chr5:79033461..79033496,+ | |id=chr5:79033461..79033496,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0010226;7.89e-13;1!UBERON:0010227;1.25e-12;1!UBERON:0004874;1.57e-12;1!UBERON:0000358;2.91e-12;1!UBERON:0005062;3.65e-12;4!UBERON:0007284;3.65e-12;4!UBERON:0003104;1.11e-08;31!UBERON:0006603;2.11e-07;65!UBERON:0008814;6.42e-07;2!UBERON:0010056;6.42e-07;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:114;9.27e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:114,9.54e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.06e-28!115;UBERON:0001049!1.19e-14!57;UBERON:0005068!1.19e-14!57;UBERON:0006241!1.19e-14!57;UBERON:0007135!1.19e-14!57;UBERON:0002616!3.03e-11!59;UBERON:0002780!2.34e-10!41;UBERON:0001890!2.34e-10!41;UBERON:0006240!2.34e-10!41;UBERON:0001017!2.79e-10!82;UBERON:0003080!5.09e-10!42;UBERON:0002020!6.65e-10!34;UBERON:0003528!6.65e-10!34;UBERON:0003075!8.92e-10!86;UBERON:0007284!8.92e-10!86;UBERON:0000955!9.16e-10!69;UBERON:0006238!9.16e-10!69;UBERON:0005743!1.61e-09!86;UBERON:0002346!4.58e-09!90;UBERON:0000073!7.54e-09!94;UBERON:0001016!7.54e-09!94;UBERON:0004121!2.90e-08!169;UBERON:0000924!7.11e-08!173;UBERON:0006601!7.11e-08!173;UBERON:0000153!1.01e-07!129;UBERON:0007811!1.01e-07!129;UBERON:0000956!1.29e-07!25;UBERON:0000203!1.29e-07!25;UBERON:0002791!1.66e-07!33;UBERON:0002771!2.03e-07!3;UBERON:0001893!3.26e-07!34;UBERON:0007100!6.46e-07!27;UBERON:0006331!7.28e-07!3 | |ontology_enrichment_uberon=UBERON:0007023!1.06e-28!115;UBERON:0001049!1.19e-14!57;UBERON:0005068!1.19e-14!57;UBERON:0006241!1.19e-14!57;UBERON:0007135!1.19e-14!57;UBERON:0002616!3.03e-11!59;UBERON:0002780!2.34e-10!41;UBERON:0001890!2.34e-10!41;UBERON:0006240!2.34e-10!41;UBERON:0001017!2.79e-10!82;UBERON:0003080!5.09e-10!42;UBERON:0002020!6.65e-10!34;UBERON:0003528!6.65e-10!34;UBERON:0003075!8.92e-10!86;UBERON:0007284!8.92e-10!86;UBERON:0000955!9.16e-10!69;UBERON:0006238!9.16e-10!69;UBERON:0005743!1.61e-09!86;UBERON:0002346!4.58e-09!90;UBERON:0000073!7.54e-09!94;UBERON:0001016!7.54e-09!94;UBERON:0004121!2.90e-08!169;UBERON:0000924!7.11e-08!173;UBERON:0006601!7.11e-08!173;UBERON:0000153!1.01e-07!129;UBERON:0007811!1.01e-07!129;UBERON:0000956!1.29e-07!25;UBERON:0000203!1.29e-07!25;UBERON:0002791!1.66e-07!33;UBERON:0002771!2.03e-07!3;UBERON:0001893!3.26e-07!34;UBERON:0007100!6.46e-07!27;UBERON:0006331!7.28e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0005090;1.42e-23;2!UBERON:0001630;1.42e-23;2!UBERON:0000341;1.01e-22;2!UBERON:0004151;3.98e-16;3!UBERON:0001723;4.99e-16;3!UBERON:0001033;4.99e-16;3!UBERON:0003978;6.74e-16;3!UBERON:0000946;6.74e-16;3!UBERON:0007100;1.19e-15;25!UBERON:0001389;7.03e-13;1!UBERON:0000026;7.03e-13;1!UBERON:0008784;7.03e-13;1!UBERON:0006058;7.03e-13;1!UBERON:0003663;7.03e-13;1!UBERON:0004256;7.03e-13;1!UBERON:0004708;7.03e-13;1!UBERON:0002101;7.03e-13;1!UBERON:0004709;7.03e-13;1!UBERON:0002529;7.03e-13;1!UBERON:0010538;7.03e-13;1!UBERON:0003661;7.03e-13;1!UBERON:0010890;7.03e-13;1!UBERON:0002471;7.03e-13;1!UBERON:0001383;7.03e-13;1!UBERON:0010758;7.03e-13;1!UBERON:0010707;7.03e-13;1!UBERON:0000978;7.03e-13;1!UBERON:0002103;7.03e-13;1!UBERON:0001665;7.03e-13;1!UBERON:0003823;7.03e-13;1!UBERON:0000154;7.03e-13;1!UBERON:0010709;7.03e-13;1!UBERON:0002084;7.89e-13;1!UBERON:0002082;7.89e-13;1!UBERON:0002146;9.92e-13;1!UBERON:0005623;9.92e-13;1!UBERON:0002079;1.25e-12;1!UBERON:0000989;1.57e-12;1!UBERON:0008811;1.57e-12;1!UBERON:0002426;1.75e-12;1!UBERON:0003831;1.75e-12;1!UBERON:0003898;1.75e-12;1!UBERON:0004830;1.75e-12;1!UBERON:0003830;1.75e-12;1!UBERON:0005175;1.75e-12;1!UBERON:0001774;1.75e-12;1!UBERON:0001103;1.75e-12;1!UBERON:0002135;2.20e-12;1!UBERON:0001134;1.67e-11;16!UBERON:0002036;1.67e-11;16!UBERON:0000948;1.95e-08;22!UBERON:0000974;3.31e-08;6!UBERON:0002081;6.07e-07;2!UBERON:0002133;8.06e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005090,1.42e-23,2;UBERON:0001630,1.42e-23,2;UBERON:0000341,8.55e-23,2;UBERON:0004151,3.98e-16,3;UBERON:0001723,5.38e-16,3;UBERON:0001033,5.38e-16,3;UBERON:0010056,5.38e-16,3;UBERON:0003978,6.26e-16,3;UBERON:0009751,6.26e-16,3;UBERON:0000946,6.26e-16,3;UBERON:0002523,6.26e-16,3;UBERON:0005983,6.26e-16,3;UBERON:0002165,6.26e-16,3;UBERON:0002062,6.26e-16,3;UBERON:0007280,6.26e-16,3;UBERON:0007100,1.82e-14,27;UBERON:0005418,7.03e-13,1;UBERON:0001389,7.03e-13,1;UBERON:0000026,7.03e-13,1;UBERON:0008784,7.03e-13,1;UBERON:0006058,7.03e-13,1;UBERON:0003663,7.03e-13,1;UBERON:0004256,7.03e-13,1;UBERON:0004708,7.03e-13,1;UBERON:0002101,7.03e-13,1;UBERON:0004709,7.03e-13,1;UBERON:0002529,7.03e-13,1;UBERON:0010538,7.03e-13,1;UBERON:0003661,7.03e-13,1;UBERON:0010890,7.03e-13,1;UBERON:0002471,7.03e-13,1;UBERON:0001383,7.03e-13,1;UBERON:0004357,7.03e-13,1;UBERON:0004347,7.03e-13,1;UBERON:0005420,7.03e-13,1;UBERON:0005732,7.03e-13,1;UBERON:0010758,7.03e-13,1;UBERON:0010707,7.03e-13,1;UBERON:0000978,7.03e-13,1;UBERON:0002103,7.03e-13,1;UBERON:0001665,7.03e-13,1;UBERON:0003823,7.03e-13,1;UBERON:0000154,7.03e-13,1;UBERON:0010709,7.03e-13,1;UBERON:0005733,7.03e-13,1;UBERON:0005730,7.03e-13,1;UBERON:0002084,7.89e-13,1;UBERON:0002082,7.89e-13,1;UBERON:0010226,7.89e-13,1;UBERON:0002146,9.92e-13,1;UBERON:0005623,9.92e-13,1;UBERON:0002079,1.25e-12,1;UBERON:0000989,1.57e-12,1;UBERON:0008811,1.57e-12,1;UBERON:0006258,1.57e-12,1;UBERON:0005876,1.57e-12,1;UBERON:0004874,1.57e-12,1;UBERON:0002426,1.75e-12,1;UBERON:0003831,1.75e-12,1;UBERON:0003898,1.75e-12,1;UBERON:0004830,1.75e-12,1;UBERON:0003830,1.75e-12,1;UBERON:0005175,1.75e-12,1;UBERON:0001774,1.75e-12,1;UBERON:0001103,1.75e-12,1;UBERON:0010084,1.75e-12,1;UBERON:0002135,1.96e-12,1;UBERON:0003103,4.26e-12,68;UBERON:0007023,2.49e-10,114;UBERON:0000948,9.39e-08,24;UBERON:0005498,9.39e-08,24;UBERON:0004140,9.39e-08,24;UBERON:0009881,9.39e-08,24;UBERON:0004141,9.39e-08,24;UBERON:0003084,9.39e-08,24;UBERON:0007005,9.39e-08,24;UBERON:0004139,9.39e-08,24;UBERON:0004291,9.39e-08,24;UBERON:0004797,2.45e-07,7;UBERON:0002081,6.07e-07,2;UBERON:0010227,6.07e-07,2;UBERON:0002133,7.61e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0.125542639594803,0,0,0,0,0,0,0,0,0,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486634870302636,0,0,0,0,0,0,0,0.174129737299267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0.168776332241266,0,0,0,0.161646056818812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0.299918973546171,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0.207970861530807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0,0,0,0,0,0.368323955743585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.42793898803392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307240764308458,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0.307160702099232,0,0.140669416410513,0,0,0,0,0,0,0.818149460017238,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0.221158519862449,0.295547618953547,0,0,0,0.0769502585037971,0,0,0.179515288819544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.01288823649394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,0.193978032976839,0,0.677942222341597,0,0,0.0633107959558787,0.195551382734803,0,0,0.19980960958213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.90995361781156,13.062144168666,0,0.399358000997982,2.14613024068285,1.56220020209311,0.873385142327441,0,0,0,0,0,0,0,0,0.681017030557878,0,0,0,0,0,0,0,0.236417121897595,0,0,0,0,10.7204298956005,15.8902072887704,0,0,0,0,0,0.082092520749339,0,0,0,0,0.387848869084652,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0.327872630709804,0,0,0.610131324509816,0.500763722825999,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0.554805861502613,0,0,0,0,0,0.15543720058278,0.147855149989634,0,0,0,0,0.265841714557995,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159633859057151,0,0.252071696221718,0,0,0,0,0,0,0,0,0,0,0.451261970095544,0,0,0,0,0,0,0,0.413373593002368,0,0,0.548257766857182,6.94695649745012,0,0,0.535701835878287,0,0,0.227662191351298,0.0887023701626388,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118332000730565,0,0,0.22910686854405,0,0,0,0,0,50.4994493006558,13.7568161187371,3.4794432940146,0.971421986118279,0,0,0,0,0,0,0,0.218559560503957,0,0.245148321753905,0,0.392616934229891,0.297046400327086,0,0,0,0,0,0,0,0,0,0.458729283404541,0.143339583151451,0,0,0,0,0,0,0.432626562123789,0,0,0.126698501011437,0,0,0,0,0.0757786982182394,0,0.829169439458779,0.103432995861895,3.62497769231668,1.90451545170992,0,0.0620747142958579,0,0.190941474834495,1.81905470062397,7.83780292429061,13.0048654412407,0,0,1.33064142618405,0,0,0,0,2.34640942403454,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0.125542639594803,0,0,0,0,0,0,0,0,0,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486634870302636,0,0,0,0,0,0,0,0.174129737299267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0.168776332241266,0,0,0,0.161646056818812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0.299918973546171,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0.207970861530807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0,0,0,0,0,0.368323955743585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.42793898803392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307240764308458,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0.307160702099232,0,0.140669416410513,0,0,0,0,0,0,0.818149460017238,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0.221158519862449,0.295547618953547,0,0,0,0.0769502585037971,0,0,0.179515288819544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.01288823649394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,0.193978032976839,0,0.677942222341597,0,0,0.0633107959558787,0.195551382734803,0,0,0.19980960958213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.90995361781156,13.062144168666,0,0.399358000997982,2.14613024068285,1.56220020209311,0.873385142327441,0,0,0,0,0,0,0,0,0.681017030557878,0,0,0,0,0,0,0,0.236417121897595,0,0,0,0,10.7204298956005,15.8902072887704,0,0,0,0,0,0.082092520749339,0,0,0,0,0.387848869084652,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0.327872630709804,0,0,0.610131324509816,0.500763722825999,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0.554805861502613,0,0,0,0,0,0.15543720058278,0.147855149989634,0,0,0,0,0.265841714557995,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159633859057151,0,0.252071696221718,0,0,0,0,0,0,0,0,0,0,0.451261970095544,0,0,0,0,0,0,0,0.413373593002368,0,0,0.548257766857182,6.94695649745012,0,0,0.535701835878287,0,0,0.227662191351298,0.0887023701626388,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118332000730565,0,0,0.22910686854405,0,0,0,0,0,50.4994493006558,13.7568161187371,3.4794432940146,0.971421986118279,0,0,0,0,0,0,0,0.218559560503957,0,0.245148321753905,0,0.392616934229891,0.297046400327086,0,0,0,0,0,0,0,0,0,0.458729283404541,0.143339583151451,0,0,0,0,0,0,0.432626562123789,0,0,0.126698501011437,0,0,0,0,0.0757786982182394,0,0.829169439458779,0.103432995861895,3.62497769231668,1.90451545170992,0,0.0620747142958579,0,0.190941474834495,1.81905470062397,7.83780292429061,13.0048654412407,0,0,1.33064142618405,0,0,0,0,2.34640942403454,0,0,0,0,0 | ||
|short_description=p4@CMYA5 | |short_description=p4@CMYA5 | ||
}} | }} |
Latest revision as of 21:58, 18 September 2015
Short description: | p4@CMYA5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_CMYA5_5end |
Coexpression cluster: | C9_skeletal_diaphragm_tongue_throat_penis_heart_left |
Association with transcript: | -468bp_to_ENST00000506603_5end |
EntrezGene: | CMYA5 |
HGNC: | 14305 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
heart disease | 9.54e-07 | 2 |