FFCP PHASE1:Hg19::chr1:6520570..6520586,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=83715 | |EntrezGene=83715 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13281 | |HGNC=13281 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=2bp_to_ENST00000468561_5end | |association_with_transcript=2bp_to_ENST00000468561_5end | ||
|cluster_id=chr1:6520570..6520586,+ | |||
|description=CAGE_peak_19_at_ESPN_5end | |description=CAGE_peak_19_at_ESPN_5end | ||
|id=chr1:6520570..6520586,+ | |id=chr1:6520570..6520586,+ | ||
|ontology_enrichment_celltype=CL:0000181!1.72e-13!12;CL:0000417!1.72e-13!12;CL:0000668!1.72e-13!12;CL:0000414!1.72e-13!12;CL:0000412!1.72e-13!12;CL:0000182!1.72e-13!12;CL:0002231!1.64e-09!3 | |ontology_enrichment_celltype=CL:0000181!1.72e-13!12;CL:0000417!1.72e-13!12;CL:0000668!1.72e-13!12;CL:0000414!1.72e-13!12;CL:0000412!1.72e-13!12;CL:0000182!1.72e-13!12;CL:0002231!1.64e-09!3 | ||
|ontology_enrichment_celltype_v019=CL:0000182;3.07e-09;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.89e-09,12 | |||
|ontology_enrichment_development_v019=UBERON:0007297;1.29e-13;2!UBERON:0004161;5.41e-10;11!UBERON:0009497;1.34e-08;13 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0006947!1.76e-20!3;UBERON:0004054!1.76e-20!3;UBERON:0002107!3.01e-16!19;UBERON:0006925!3.01e-16!19;UBERON:0008836!3.01e-16!19;UBERON:0005904!1.66e-15!4;UBERON:0008835!6.45e-14!22;UBERON:0003894!6.45e-14!22;UBERON:0003101!1.45e-13!22;UBERON:0000079!1.45e-13!22;UBERON:0009854!2.83e-13!23;UBERON:0007499!3.82e-12!25;UBERON:0009497!3.82e-12!25;UBERON:0000015!3.82e-12!25;UBERON:0002423!3.82e-12!25;UBERON:0006235!3.82e-12!25;UBERON:0004161!3.82e-12!25;UBERON:0005057!1.21e-11!26;UBERON:0009856!1.21e-11!26;UBERON:0002530!2.32e-11!59;UBERON:0003929!2.45e-10!54;UBERON:0003135!9.19e-10!11;UBERON:0002365!1.26e-09!31;UBERON:0002330!1.26e-09!31;UBERON:0003937!1.05e-08!12;UBERON:0005399!1.05e-08!12;UBERON:0002368!1.99e-08!35;UBERON:0004921!2.37e-08!129;UBERON:0004185!2.37e-08!129;UBERON:0005172!2.67e-08!55;UBERON:0005173!2.67e-08!55;UBERON:0001301!4.35e-08!1;UBERON:0006122!5.33e-08!1;UBERON:0000998!6.10e-08!1;UBERON:0006868!6.10e-08!1;UBERON:0001000!6.97e-08!1;UBERON:0005352!6.97e-08!1;UBERON:0005911!1.36e-07!82;UBERON:0002417!2.42e-07!61;UBERON:0000916!2.42e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0001301;8.64e-26;1!UBERON:0002107;3.02e-21;19!UBERON:0006925;3.02e-21;19!UBERON:0002423;2.79e-16;25!UBERON:0002365;4.25e-13;31!UBERON:0002330;4.25e-13;31!UBERON:0001155;3.95e-12;9!UBERON:0002368;1.99e-11;33!UBERON:0000059;4.22e-10;11!UBERON:0006947;1.60e-09;3!UBERON:0004054;1.60e-09;3!UBERON:0000949;2.30e-08;43!UBERON:0001007;5.33e-08;81!UBERON:0005904;1.86e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001301,1.26e-25,1;UBERON:0002107,2.72e-21,19;UBERON:0006925,2.72e-21,19;UBERON:0008836,2.72e-21,19;UBERON:0008835,1.82e-18,22;UBERON:0003894,1.82e-18,22;UBERON:0009854,1.10e-17,23;UBERON:0007499,2.58e-16,25;UBERON:0009497,2.58e-16,25;UBERON:0000015,2.58e-16,25;UBERON:0002423,2.58e-16,25;UBERON:0006235,2.58e-16,25;UBERON:0004161,2.58e-16,25;UBERON:0009856,1.05e-15,26;UBERON:0002365,2.97e-13,31;UBERON:0002330,2.97e-13,31;UBERON:0001155,3.95e-12,9;UBERON:0002368,8.60e-12,35;UBERON:0005172,1.06e-11,54;UBERON:0005173,1.06e-11,54;UBERON:0002417,1.48e-10,60;UBERON:0000916,1.48e-10,60;UBERON:0000059,4.22e-10,11;UBERON:0006947,1.81e-09,3;UBERON:0004054,1.81e-09,3;UBERON:0000949,2.89e-09,45;UBERON:0003929,8.77e-08,54;UBERON:0004921,1.29e-07,118;UBERON:0005904,2.04e-07,4;UBERON:0002530,3.74e-07,59 | |||
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|short_description=p19@ESPN | |short_description=p19@ESPN | ||
}} | }} |
Latest revision as of 21:53, 18 September 2015
Short description: | p19@ESPN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_19_at_ESPN_5end |
Coexpression cluster: | NA |
Association with transcript: | 2bp_to_ENST00000468561_5end |
EntrezGene: | ESPN |
HGNC: | 13281 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.89e-09 | 12 |
Ontology term | p-value | n |
---|---|---|
epididymis | 1.26e-25 | 1 |
liver | 2.72e-21 | 19 |
digestive gland | 2.72e-21 | 19 |
liver bud | 2.72e-21 | 19 |
hepatic diverticulum | 1.82e-18 | 22 |
liver primordium | 1.82e-18 | 22 |
digestive tract diverticulum | 1.10e-17 | 23 |
epithelial sac | 2.58e-16 | 25 |
epithelium of foregut-midgut junction | 2.58e-16 | 25 |
anatomical boundary | 2.58e-16 | 25 |
hepatobiliary system | 2.58e-16 | 25 |
foregut-midgut junction | 2.58e-16 | 25 |
septum transversum | 2.58e-16 | 25 |
sac | 1.05e-15 | 26 |
exocrine gland | 2.97e-13 | 31 |
exocrine system | 2.97e-13 | 31 |
colon | 3.95e-12 | 9 |
endocrine gland | 8.60e-12 | 35 |
abdomen element | 1.06e-11 | 54 |
abdominal segment element | 1.06e-11 | 54 |
abdominal segment of trunk | 1.48e-10 | 60 |
abdomen | 1.48e-10 | 60 |
large intestine | 4.22e-10 | 11 |
male genital duct | 1.81e-09 | 3 |
internal male genitalia | 1.81e-09 | 3 |
endocrine system | 2.89e-09 | 45 |
gut epithelium | 8.77e-08 | 54 |
subdivision of digestive tract | 1.29e-07 | 118 |
duct of male reproductive system | 2.04e-07 | 4 |
gland | 3.74e-07 | 59 |