FFCP PHASE1:Hg19::chr17:17485731..17485795,-: Difference between revisions
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|id=chr17:17485731..17485795,-
|short_description=p6@PEMT
|description=CAGE_peak_6_at_PEMT_5end
|association_with_transcript=0bp_to_ENST00000395783,NM_007169,uc002g...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10400 | |EntrezGene=10400 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8830 | |HGNC=8830 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UBM1 | |UniProt=Q9UBM1 | ||
|association_with_transcript=0bp_to_ENST00000395783,NM_007169,uc002grk.2_5end | |||
|cluster_id=chr17:17485731..17485795,- | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_6_at_PEMT_5end | |||
|id=chr17:17485731..17485795,- | |||
|ontology_enrichment_celltype=CL:0000181!9.06e-22!12;CL:0000417!9.06e-22!12;CL:0000668!9.06e-22!12;CL:0000414!9.06e-22!12;CL:0000412!9.06e-22!12;CL:0000182!9.06e-22!12 | |||
|ontology_enrichment_celltype_v019=CL:0000182;5.24e-49;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,4.63e-49,12;CL:0000223,4.47e-10,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;2.25e-37;11!UBERON:0009497;1.15e-31;13!UBERON:0001041;8.20e-14;30!UBERON:0003104;2.39e-13;31!CL:0000223;1.15e-07;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005057!1.44e-26!26;UBERON:0002107!5.91e-24!19;UBERON:0006925!5.91e-24!19;UBERON:0008836!5.91e-24!19;UBERON:0008835!1.54e-20!22;UBERON:0003894!1.54e-20!22;UBERON:0009854!1.35e-19!23;UBERON:0007499!6.12e-18!25;UBERON:0009497!6.12e-18!25;UBERON:0000015!6.12e-18!25;UBERON:0002423!6.12e-18!25;UBERON:0006235!6.12e-18!25;UBERON:0004161!6.12e-18!25;UBERON:0009856!3.31e-17!26;UBERON:0002368!1.22e-15!35;UBERON:0002365!3.01e-14!31;UBERON:0002330!3.01e-14!31;UBERON:0000949!7.51e-12!45;UBERON:0005172!1.14e-11!55;UBERON:0005173!1.14e-11!55;UBERON:0002417!2.35e-10!61;UBERON:0000916!2.35e-10!61;UBERON:0001041!4.53e-10!98;UBERON:0003929!1.22e-09!54;UBERON:0002530!1.06e-08!59;UBERON:0002146!1.84e-08!1;UBERON:0005623!1.84e-08!1;UBERON:0000077!3.08e-08!130;UBERON:0007190!3.28e-08!1;UBERON:0005177!1.36e-07!107;UBERON:0005911!3.00e-07!82;UBERON:0009569!4.47e-07!113;UBERON:0004921!5.26e-07!129;UBERON:0004185!5.26e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;6.16e-55;19!UBERON:0006925;6.16e-55;19!UBERON:0002423;1.10e-41;25!UBERON:0002365;2.78e-32;31!UBERON:0002330;2.78e-32;31!UBERON:0002368;1.87e-28;33!UBERON:0000949;8.32e-21;43!UBERON:0005172;1.85e-12;52!UBERON:0005173;1.85e-12;52!UBERON:0002417;6.31e-11;58!UBERON:0000916;6.31e-11;58!UBERON:0002530;8.45e-11;57!UBERON:0001007;1.13e-07;81 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,5.55e-55,19;UBERON:0006925,5.55e-55,19;UBERON:0008836,5.55e-55,19;UBERON:0008835,1.89e-47,22;UBERON:0003894,1.89e-47,22;UBERON:0009854,2.25e-45,23;UBERON:0007499,1.01e-41,25;UBERON:0009497,1.01e-41,25;UBERON:0000015,1.01e-41,25;UBERON:0002423,1.01e-41,25;UBERON:0006235,1.01e-41,25;UBERON:0004161,1.01e-41,25;UBERON:0009856,4.18e-40,26;UBERON:0002365,1.39e-33,31;UBERON:0002330,1.39e-33,31;UBERON:0002368,1.05e-29,35;UBERON:0000949,5.16e-23,45;UBERON:0003929,4.20e-19,54;UBERON:0005172,4.20e-19,54;UBERON:0005173,4.20e-19,54;UBERON:0002530,1.92e-17,59;UBERON:0002417,3.82e-17,60;UBERON:0000916,3.82e-17,60;UBERON:0005911,2.11e-12,82;UBERON:0001041,1.17e-11,87;UBERON:0005177,5.86e-10,101;UBERON:0009569,6.41e-09,112;UBERON:0003914,1.64e-08,117;UBERON:0004921,2.34e-08,118;UBERON:0005256,3.90e-08,122 | |||
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|short_description=p6@PEMT | |||
}} | }} |
Latest revision as of 21:43, 18 September 2015
Short description: | p6@PEMT |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_PEMT_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 0bp_to_ENST00000395783, NM_007169, uc002grk.2_5end |
EntrezGene: | PEMT |
HGNC: | 8830 |
UniProt: | Q9UBM1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 4.63e-49 | 12 |
endodermal cell | 4.47e-10 | 58 |
Ontology term | p-value | n |
---|---|---|
liver | 5.55e-55 | 19 |
digestive gland | 5.55e-55 | 19 |
liver bud | 5.55e-55 | 19 |
hepatic diverticulum | 1.89e-47 | 22 |
liver primordium | 1.89e-47 | 22 |
digestive tract diverticulum | 2.25e-45 | 23 |
epithelial sac | 1.01e-41 | 25 |
epithelium of foregut-midgut junction | 1.01e-41 | 25 |
anatomical boundary | 1.01e-41 | 25 |
hepatobiliary system | 1.01e-41 | 25 |
foregut-midgut junction | 1.01e-41 | 25 |
septum transversum | 1.01e-41 | 25 |
sac | 4.18e-40 | 26 |
exocrine gland | 1.39e-33 | 31 |
exocrine system | 1.39e-33 | 31 |
endocrine gland | 1.05e-29 | 35 |
endocrine system | 5.16e-23 | 45 |
gut epithelium | 4.20e-19 | 54 |
abdomen element | 4.20e-19 | 54 |
abdominal segment element | 4.20e-19 | 54 |
gland | 1.92e-17 | 59 |
abdominal segment of trunk | 3.82e-17 | 60 |
abdomen | 3.82e-17 | 60 |
endo-epithelium | 2.11e-12 | 82 |
foregut | 1.17e-11 | 87 |
trunk region element | 5.86e-10 | 101 |
subdivision of trunk | 6.41e-09 | 112 |
epithelial tube | 1.64e-08 | 117 |
subdivision of digestive tract | 2.34e-08 | 118 |
trunk mesenchyme | 3.90e-08 | 122 |