FFCP PHASE1:Hg19::chr5:78809656..78809701,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9456 | |EntrezGene=9456 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17512 | |HGNC=17512 | ||
|TSSclassifier=strong | |||
|UniProt=Q5U5K4,Q86YM7 | |UniProt=Q5U5K4,Q86YM7 | ||
|association_with_transcript=0bp_to_NM_004272,uc003kfy.2,uc010jab.2,uc010jac.2,uc010jad.2_5end | |association_with_transcript=0bp_to_NM_004272,uc003kfy.2,uc010jab.2,uc010jac.2,uc010jad.2_5end | ||
|cluster_id=chr5:78809656..78809701,- | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_6_at_HOMER1_5end | |description=CAGE_peak_6_at_HOMER1_5end | ||
|id=chr5:78809656..78809701,- | |id=chr5:78809656..78809701,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000511;9.54e-07;1!CL:0002625;9.54e-07;1!CL:0000216;9.54e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000511,8.34e-07,1;CL:0002625,8.34e-07,1;CL:0000216,8.34e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0006601;5.72e-12;82!UBERON:0010122;4.18e-11;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2513;9.54e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:2513,9.81e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0001893!3.12e-24!34;UBERON:0001869!9.30e-24!32;UBERON:0002791!3.39e-23!33;UBERON:0002780!1.15e-22!41;UBERON:0001890!1.15e-22!41;UBERON:0006240!1.15e-22!41;UBERON:0002020!2.41e-22!34;UBERON:0003528!2.41e-22!34;UBERON:0003080!8.30e-22!42;UBERON:0001049!3.23e-20!57;UBERON:0005068!3.23e-20!57;UBERON:0006241!3.23e-20!57;UBERON:0007135!3.23e-20!57;UBERON:0002619!1.43e-19!22;UBERON:0002616!9.48e-19!59;UBERON:0001950!7.12e-18!20;UBERON:0000955!8.73e-18!69;UBERON:0006238!8.73e-18!69;UBERON:0000956!1.43e-17!25;UBERON:0000203!1.43e-17!25;UBERON:0001017!3.23e-15!82;UBERON:0005743!1.32e-14!86;UBERON:0000073!1.62e-14!94;UBERON:0001016!1.62e-14!94;UBERON:0003056!9.73e-14!61;UBERON:0003075!3.28e-12!86;UBERON:0007284!3.28e-12!86;UBERON:0002346!1.36e-11!90;UBERON:0007023!5.79e-11!115;UBERON:0002420!5.75e-09!9;UBERON:0007245!5.75e-09!9;UBERON:0010009!5.75e-09!9;UBERON:0010011!5.75e-09!9;UBERON:0000454!5.75e-09!9;UBERON:0000033!3.08e-08!123;UBERON:0000153!4.81e-08!129;UBERON:0007811!4.81e-08!129;UBERON:0000200!8.69e-08!6;UBERON:0001871!3.52e-07!7;UBERON:0009663!5.06e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;2.05e-74;20!UBERON:0001869;4.91e-69;32!UBERON:0002619;1.37e-67;22!UBERON:0001893;2.24e-66;34!UBERON:0002791;1.43e-63;32!UBERON:0000956;2.54e-59;25!UBERON:0000203;2.54e-59;25!UBERON:0003528;1.23e-57;34!UBERON:0002020;1.23e-57;34!UBERON:0002780;2.73e-40;41!UBERON:0001890;2.73e-40;41!UBERON:0000200;1.22e-30;6!UBERON:0000073;4.73e-27;53!UBERON:0002616;4.73e-27;53!UBERON:0000955;1.59e-26;68!UBERON:0001871;4.70e-25;6!UBERON:0001017;3.64e-24;75!UBERON:0000369;6.50e-21;4!UBERON:0002435;6.50e-21;4!UBERON:0000204;6.50e-21;4!UBERON:0002420;6.95e-20;9!UBERON:0007245;6.95e-20;9!UBERON:0010009;6.95e-20;9!UBERON:0010011;6.95e-20;9!UBERON:0000454;6.95e-20;9!UBERON:0001872;1.24e-16;5!UBERON:0002021;1.31e-16;5!UBERON:0001870;1.41e-16;3!UBERON:0005383;5.13e-16;3!UBERON:0005382;5.13e-16;3!UBERON:0001016;3.25e-15;83!UBERON:0009663;5.18e-12;7!UBERON:0002702;1.57e-11;2!UBERON:0001873;4.18e-11;2!UBERON:0002771;6.12e-11;2!UBERON:0001876;6.12e-11;2!UBERON:0000349;1.04e-09;5!UBERON:0000125;2.32e-09;9!UBERON:0002308;2.32e-09;9!UBERON:0007023;9.37e-09;114!UBERON:0011216;1.35e-07;132!UBERON:0001136;9.54e-07;1!UBERON:0001343;9.54e-07;1!UBERON:0004910;9.54e-07;1!UBERON:0004813;9.54e-07;1!UBERON:0007190;9.54e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001869,6.28e-77,32;UBERON:0001950,1.46e-74,20;UBERON:0001893,3.09e-72,34;UBERON:0002791,5.48e-70,32;UBERON:0002619,1.00e-67,22;UBERON:0003528,1.06e-65,34;UBERON:0002020,1.06e-65,34;UBERON:0000956,1.94e-59,25;UBERON:0000203,1.94e-59,25;UBERON:0002780,2.49e-59,41;UBERON:0001890,2.49e-59,41;UBERON:0003080,2.49e-59,41;UBERON:0006240,2.49e-59,41;UBERON:0000073,4.48e-49,53;UBERON:0002616,4.48e-49,53;UBERON:0000955,2.10e-47,68;UBERON:0006238,2.10e-47,68;UBERON:0001049,3.30e-46,56;UBERON:0005068,3.30e-46,56;UBERON:0006241,3.30e-46,56;UBERON:0007135,3.30e-46,56;UBERON:0001017,3.45e-42,81;UBERON:0003056,1.66e-38,61;UBERON:0001016,1.83e-37,89;UBERON:0000200,9.28e-31,6;UBERON:0003075,4.92e-30,82;UBERON:0007284,4.92e-30,82;UBERON:0002346,2.10e-28,86;UBERON:0001871,3.50e-25,6;UBERON:0007023,1.99e-24,114;UBERON:0010371,1.32e-22,104;UBERON:0000369,4.67e-21,4;UBERON:0002435,4.67e-21,4;UBERON:0000204,4.67e-21,4;UBERON:0010082,4.67e-21,4;UBERON:0002420,5.42e-20,9;UBERON:0007245,5.42e-20,9;UBERON:0010009,5.42e-20,9;UBERON:0010011,5.42e-20,9;UBERON:0000454,5.42e-20,9;UBERON:0004121,1.91e-18,171;UBERON:0000924,1.91e-18,171;UBERON:0006601,1.91e-18,171;UBERON:0010314,2.39e-18,132;UBERON:0001870,1.21e-16,3;UBERON:0001872,1.29e-16,5;UBERON:0002021,1.52e-16,5;UBERON:0005383,3.78e-16,3;UBERON:0005382,3.78e-16,3;UBERON:0011216,8.35e-14,223;UBERON:0009663,4.31e-12,7;UBERON:0002702,1.45e-11,2;UBERON:0001873,2.85e-11,2;UBERON:0010122,2.85e-11,2;UBERON:0002771,4.08e-11,2;UBERON:0001876,5.83e-11,2;UBERON:0000025,7.17e-10,192;UBERON:0000349,9.97e-10,5;UBERON:0000125,2.01e-09,9;UBERON:0002308,2.01e-09,9;UBERON:0004111,9.69e-08,240;UBERON:0001136,8.34e-07,1;UBERON:0001343,8.34e-07,1;UBERON:0004910,8.34e-07,1;UBERON:0005154,8.34e-07,1;UBERON:0005295,8.34e-07,1;UBERON:0004813,8.34e-07,1;UBERON:0005297,8.34e-07,1;UBERON:0005294,8.34e-07,1;UBERON:0010141,8.34e-07,1;UBERON:0005891,8.34e-07,1 | |||
|phase1_expression=0.181678379270557,0,0,0,0.446961094427288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0.125542639594803,0.152826811495903,0.246301768349837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0.767175371061182,0,0,0,1.5905718941022,2.43317435151318,0.0945348171640679,0,0,0.130979075497713,0,0,0.324547393654683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.81014194788176,0.0892997282840798,0,0,0,0,0,0,0,0,1.49091585508596,0.12663051166458,0,0,0,0,0,0,0,0,0,0,0,0.234321431833797,0,0,0,0.117434498643765,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0,0,0,0,0,0.211931901159562,0,0,0,0,0,0.0974370051611986,0,0,0,0,0.403008392910561,0,0,0,0,0.121973706129595,0,0.348581828608555,0.207322110030741,0.252320850875628,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0.237270619111097,0,0.196221465125346,0,0,0,0,0,0,0.982827216677626,0,0,0,0.686271241194102,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0.234004265139238,0.297262324577456,0,0,0,0,0,0.383382679165211,0,0,0,0,0,0,0.381988425558278,0,0,0.102827492703324,0.300343057843917,0.285826432630578,0,0,0.36669142910475,0.129271715757778,0,0,0,0,0,0,0,0.714889968290738,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,0.289562613335158,0.205476322550383,0.179060963239896,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0.415941723061614,0,0.157702415033935,0.117141414992713,0.601892199455438,0,0,0,0.368738337083406,0,0,0,0,0,0.106727557803444,0,0,0,0.744323423456331,0,0.561320188866147,0.256278298511402,0.511707249066704,0.160853921143607,0,0,0,0,0.519254429183621,0.116210378459959,0,0.601519410909855,0,0,0,0,0,0.0770153371044148,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0,0.27470839445503,0,0,0,4.82051789532479,0.096670718292122,0,0,0,0,0,0,0.356128142586949,0.165284915360978,0,0.510450849978337,0.4046311234222,0,0.31481234683064,0,0,0,0,0,0.572499546967965,0,0,0.190630193923825,0,0,0.318203247925937,0.78494864019923,0,0,0,0,0,0,0.48763373908959,0.243713489631284,0,0.136499911407986,0,0,0.551365343546124,0,0,0,0,0.405820753925408,0.30982349809975,0,0.143411352204052,0.294747123039363,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0.320472213382419,0,0,0.371606350251437,0.144269212976445,0,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19538809540204,0,0,0,0,0,0,0,0,0,0,0.47748896947538,0,2.45728561679386,2.98244294329889,1.26602474769461,0.111308705022906,0.494411622680279,0.422250816255987,0,0,0,0,0.123084805461069,4.3545542272653,0.0898683511473268,0,0,0,0,0,6.78532922266653,1.11321717794222,5.98841394003583,0,0.262379999988587,0,0.341380344856499,0.254253650292766,0,0,0,0,1.77148277162768,3.49729672013683,0,0.442317039724898,1.18219047581419,1.31631238292384,0,0.139423744278603,0.0769502585037971,0,0,0.0897576444097721,0.108647371922008,0.957003479195758,0.0915975934018623,1.5991043280559,0,0,0,0.225595660617181,0,0,0,0,0.210998064528027,0,0,0.216388639742091,0,0,0,0,0.123563938946503,0,0.067401132980677,0,0.702793337176017,0.182454789215666,0,0,0.394584402849391,0,1.53036380815245,0,0.300646838828985,0,0,0,0,0,0,0,0,0,0.261177619741208,0,0,0,0,0,0.290967049465258,0,0.451961481561065,0,0.397429223405979,4.68499890073502,0,0.0801588202515337,0,0,0.144090417154106,0,0,0,0,0,0,0.104602846312333,0,0,0.600420288709789,0.136905378891993,0,0.429765441419957,0,0,0.229160424011684,0,0.399358000997982,0,0.446342914883745,0.403100834920358,0,0,0.157566364614447,0.329663433524666,0.337017719270924,0.0984274815147488,0,0.795229689809303,0.544813624446302,0,0,0,0,0,3.9487211827716,0,0.0788057072991982,0,0,0,0,0,0,0.25426853765475,0,0,0.326587360109409,0,0.164185041498678,0.511164065356265,0.226624183040251,0.146552233678082,0,0.129282956361551,0,0.171086837884329,0,0.213574825135389,0.157204305099666,0,0,0.197611631897944,0.121792598380896,0,0,0,0,0,0.157054096250234,4.43034089983493,2.68457782784319,2.6290095448365,0,0,0.124192805882767,0,0,0.606596470166591,0.285465333544967,0,0,0,0.149254802886874,0,0,0,0.251567901752575,0,0,0,0,0,0.159296767163702,0,0.310525913752519,0,0,0,0.300515217994437,0.761610424337591,0,0.181848659202559,0,0.464033759878494,0,0,0.343395705182793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256241518587947,0,0,1.65910123382077,0,0.132864840313363,0,0.327609848846413,0.737318726261158,0,0,0,0,0,0,0,0,0,0,0.314531883711793,0,0,0,0.123935764259002,0,0.954013051960256,0,0,0,0,3.66106583049819,2.8339315265117,1.27707087245721,4.1023272848151,0.756215088665154,2.35134658378341,1.29180516505481,0,0.490738592505128,0,0,0,0.381382095467167,0,0,0.0752103283492573,1.0085253435176,0,0.261906694481422,0,0,4.18733024634047,1.56215619722769,2.27355476151302,3.6781169912466,0,0,0,0,0.127762427639595,0,0.336283722218824,0,0,0.620916591138472,0.230467975111559,0,0.611727596791485,3.28863867814245,0,0.222462803784138,0,3.45654297815204,0,0,0,0.47775168788705,0,0,0.1162414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| ||
|short_description=p6@HOMER1 | |short_description=p6@HOMER1 | ||
}} | }} |
Latest revision as of 21:26, 18 September 2015
Short description: | p6@HOMER1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_HOMER1_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 0bp_to_NM_004272, uc003kfy.2, uc010jab.2, uc010jac.2, uc010jad.2_5end |
EntrezGene: | HOMER1 |
HGNC: | 17512 |
UniProt: | Q5U5K4Q86YM7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
androgen binding protein secreting cell | 8.34e-07 | 1 |
seminiferous tubule epithelial cell | 8.34e-07 | 1 |
Sertoli cell | 8.34e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
basal cell carcinoma | 9.81e-07 | 1 |