FFCP PHASE1:Hg19::chr6:43044168..43044181,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5754 | |EntrezGene=5754 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9618 | |HGNC=9618 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=61bp_to_ENST00000487673_5end | |association_with_transcript=61bp_to_ENST00000487673_5end | ||
|cluster_id=chr6:43044168..43044181,+ | |||
|coexpression_cluster_id=C4604 | |||
|description=CAGE_peak_3_at_PTK7_5end | |description=CAGE_peak_3_at_PTK7_5end | ||
|id=chr6:43044168..43044181,+ | |id=chr6:43044168..43044181,+ | ||
|ontology_enrichment_celltype=CL:0000055!1.16e-25!180;CL:0000057!3.80e-16!75;CL:0002321!1.04e-13!248;CL:0000220!1.49e-13!246;CL:0000548!1.52e-10!679;CL:0000004!1.52e-10!679;CL:0000255!1.52e-10!679;CL:0000012!1.83e-10!682;CL:0000144!2.67e-10!625;CL:0000221!3.71e-09!71;CL:0002371!5.88e-09!591;CL:0000066!7.46e-09!254;CL:0002077!9.38e-08!33;CL:0000183!1.42e-07!59;CL:0002620!1.73e-07!23 | |ontology_enrichment_celltype=CL:0000055!1.16e-25!180;CL:0000057!3.80e-16!75;CL:0002321!1.04e-13!248;CL:0000220!1.49e-13!246;CL:0000548!1.52e-10!679;CL:0000004!1.52e-10!679;CL:0000255!1.52e-10!679;CL:0000012!1.83e-10!682;CL:0000144!2.67e-10!625;CL:0000221!3.71e-09!71;CL:0002371!5.88e-09!591;CL:0000066!7.46e-09!254;CL:0002077!9.38e-08!33;CL:0000183!1.42e-07!59;CL:0002620!1.73e-07!23 | ||
|ontology_enrichment_celltype_v019=CL:0002620;1.42e-08;23!CL:0000057;8.31e-08;73!CL:0002159;7.97e-07;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,9.55e-17,76;CL:0002321,6.70e-11,250;CL:0000221,1.89e-08,72;CL:0002620,4.35e-08,23;CL:0002077,7.85e-08,34 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!7.57e-18!365;UBERON:0003102!3.35e-13!95;UBERON:0002097!9.50e-11!40;UBERON:0005085!1.44e-10!29;UBERON:0002199!4.91e-10!45;UBERON:0002416!4.91e-10!45;UBERON:0002100!6.47e-10!216;UBERON:0005256!1.64e-09!143;UBERON:0000119!8.46e-09!312;UBERON:0000486!1.06e-08!82;UBERON:0000468!1.36e-08!659;UBERON:0000483!1.87e-08!309;UBERON:0001444!4.76e-08!48;UBERON:0000914!5.21e-08!83;UBERON:0002329!5.21e-08!83;UBERON:0003077!5.21e-08!83;UBERON:0003059!5.21e-08!83;UBERON:0007282!5.21e-08!83;UBERON:0009618!5.21e-08!83;UBERON:0007285!5.21e-08!83;UBERON:0000481!1.14e-07!347;UBERON:0004923!3.73e-07!57 | |ontology_enrichment_uberon=UBERON:0000475!7.57e-18!365;UBERON:0003102!3.35e-13!95;UBERON:0002097!9.50e-11!40;UBERON:0005085!1.44e-10!29;UBERON:0002199!4.91e-10!45;UBERON:0002416!4.91e-10!45;UBERON:0002100!6.47e-10!216;UBERON:0005256!1.64e-09!143;UBERON:0000119!8.46e-09!312;UBERON:0000486!1.06e-08!82;UBERON:0000468!1.36e-08!659;UBERON:0000483!1.87e-08!309;UBERON:0001444!4.76e-08!48;UBERON:0000914!5.21e-08!83;UBERON:0002329!5.21e-08!83;UBERON:0003077!5.21e-08!83;UBERON:0003059!5.21e-08!83;UBERON:0007282!5.21e-08!83;UBERON:0009618!5.21e-08!83;UBERON:0007285!5.21e-08!83;UBERON:0000481!1.14e-07!347;UBERON:0004923!3.73e-07!57 | ||
|ontology_enrichment_uberon_v019=UBERON:0002097;9.21e-10;41!UBERON:0010371;1.32e-09;31!UBERON:0003102;5.66e-09;50!UBERON:0002199;7.56e-09;46!UBERON:0002416;7.56e-09;46!UBERON:0000970;3.22e-07;20!UBERON:0000019;5.21e-07;19!UBERON:0000047;5.21e-07;19!UBERON:0004088;5.21e-07;19!UBERON:0010230;5.21e-07;19!UBERON:0004923;6.61e-07;55 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,4.03e-13,99;UBERON:0002097,4.93e-12,41;UBERON:0005085,1.85e-11,31;UBERON:0002199,4.77e-11,46;UBERON:0002416,4.77e-11,46;UBERON:0004923,1.38e-08,66;UBERON:0000486,2.49e-08,83;UBERON:0000033,4.92e-08,56;UBERON:0001444,7.23e-08,49;UBERON:0007503,6.16e-07,78;UBERON:0002100,7.86e-07,199 | |||
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| ||
|short_description=p3@PTK7 | |short_description=p3@PTK7 | ||
}} | }} |
Latest revision as of 21:26, 18 September 2015
Short description: | p3@PTK7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_PTK7_5end |
Coexpression cluster: | C4604_Placental_Amniotic_osteosarcoma_Fibroblast_Mesenchymal_Pericytes_Osteoblast |
Association with transcript: | 61bp_to_ENST00000487673_5end |
EntrezGene: | PTK7 |
HGNC: | 9618 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 9.55e-17 | 76 |
embryonic cell | 6.70e-11 | 250 |
ectodermal cell | 1.89e-08 | 72 |
skin fibroblast | 4.35e-08 | 23 |
ecto-epithelial cell | 7.85e-08 | 34 |
Ontology term | p-value | n |
---|---|---|
surface structure | 4.03e-13 | 99 |
skin of body | 4.93e-12 | 41 |
ectodermal placode | 1.85e-11 | 31 |
integument | 4.77e-11 | 46 |
integumental system | 4.77e-11 | 46 |
organ component layer | 1.38e-08 | 66 |
multilaminar epithelium | 2.49e-08 | 83 |
head | 4.92e-08 | 56 |
subdivision of head | 7.23e-08 | 49 |
epithelial vesicle | 6.16e-07 | 78 |
trunk | 7.86e-07 | 199 |