FFCP PHASE1:Hg19::chr1:176432288..176432297,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=60676 | |EntrezGene=60676 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14615 | |HGNC=14615 | ||
|TSSclassifier=strong | |||
|UniProt=Q9BXP8,A9Z1Y8 | |UniProt=Q9BXP8,A9Z1Y8 | ||
|association_with_transcript=-9bp_to_ENST00000367661,ENST00000367662,NM_020318,NM_021936,uc001gky.1,uc001gkz.2,uc009www.2_5end | |association_with_transcript=-9bp_to_ENST00000367661,ENST00000367662,NM_020318,NM_021936,uc001gky.1,uc001gkz.2,uc009www.2_5end | ||
|cluster_id=chr1:176432288..176432297,+ | |||
|coexpression_cluster_id=C50 | |coexpression_cluster_id=C50 | ||
|description=CAGE_peak_6_at_PAPPA2_5end | |description=CAGE_peak_6_at_PAPPA2_5end | ||
|id=chr1:176432288..176432297,+ | |id=chr1:176432288..176432297,+ | ||
|ontology_enrichment_celltype=CL:0002541!1.26e-30!3;CL:0002537!1.62e-18!5 | |ontology_enrichment_celltype=CL:0002541!1.26e-30!3;CL:0002537!1.62e-18!5 | ||
|ontology_enrichment_celltype_v019=CL:0002541;5.59e-45;3!CL:0000349;1.99e-16;19!CL:0002537;7.01e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,6.25e-45,3;CL:0000349,1.94e-16,19;CL:0002537,6.55e-08,5 | |||
|ontology_enrichment_development_v019=UBERON:0003124;3.05e-34;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!1.53e-39!14;UBERON:0000158!1.53e-39!14;UBERON:0000476!1.26e-30!3;UBERON:0000920!1.26e-30!3;UBERON:0003124!2.89e-29!7;UBERON:0000478!3.16e-23!24;UBERON:0000305!1.58e-13!7;UBERON:0004871!5.83e-12!8;UBERON:0004923!6.57e-10!57;UBERON:0001987!6.87e-07!4;UBERON:0004340!6.87e-07!4 | |ontology_enrichment_uberon=UBERON:0005631!1.53e-39!14;UBERON:0000158!1.53e-39!14;UBERON:0000476!1.26e-30!3;UBERON:0000920!1.26e-30!3;UBERON:0003124!2.89e-29!7;UBERON:0000478!3.16e-23!24;UBERON:0000305!1.58e-13!7;UBERON:0004871!5.83e-12!8;UBERON:0004923!6.57e-10!57;UBERON:0001987!6.87e-07!4;UBERON:0004340!6.87e-07!4 | ||
|ontology_enrichment_uberon_v019=UBERON:0003124;5.59e-45;3!UBERON:0000920;5.59e-45;3!UBERON:0005631;2.16e-30;10!UBERON:0000158;2.16e-30;10!UBERON:0000478;1.38e-22;24!UBERON:0001987;1.27e-09;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,6.25e-45,3;UBERON:0003124,3.92e-43,7;UBERON:0005631,3.38e-38,14;UBERON:0000158,3.38e-38,14;UBERON:0000478,1.30e-22,24;UBERON:0001987,1.22e-09,4;UBERON:0004340,1.22e-09,4;UBERON:0004923,1.32e-08,66 | |||
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|short_description=p6@PAPPA2 | |short_description=p6@PAPPA2 | ||
}} | }} |
Latest revision as of 20:15, 18 September 2015
Short description: | p6@PAPPA2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_PAPPA2_5end |
Coexpression cluster: | C50_chorionic_placenta_amniotic_migratory_smallcell_chronic_choriocarcinoma |
Association with transcript: | -9bp_to_ENST00000367661, ENST00000367662, NM_020318, NM_021936, uc001gky.1, uc001gkz.2, uc009www.2_5end |
EntrezGene: | PAPPA2 |
HGNC: | 14615 |
UniProt: | Q9BXP8A9Z1Y8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 6.25e-45 | 3 |
extraembryonic cell | 1.94e-16 | 19 |
amnion mesenchymal stem cell | 6.55e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 6.25e-45 | 3 |
chorion | 3.92e-43 | 7 |
extraembryonic membrane | 3.38e-38 | 14 |
membranous layer | 3.38e-38 | 14 |
extraembryonic structure | 1.30e-22 | 24 |
placenta | 1.22e-09 | 4 |
allantois | 1.22e-09 | 4 |
organ component layer | 1.32e-08 | 66 |