FFCP PHASE1:Hg19::chr11:62380680..62380705,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:62380680..62380705,+ to FFCP PHASE1:Hg19::chr11:62380680..62380705,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6094 | |EntrezGene=6094 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10254 | |HGNC=10254 | ||
|TSSclassifier=strong | |||
|UniProt=E9PMR7 | |UniProt=E9PMR7 | ||
|association_with_transcript=-295bp_to_ENST00000525947_5end | |||
|cluster_id=chr11:62380680..62380705,+ | |||
|coexpression_cluster_id=C24 | |||
|description=CAGE_peak_4_at_ROM1_5end | |||
|id=chr11:62380680..62380705,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002521;5.23e-10;3!CL:0000228;5.97e-08;1!CL:0002372;5.97e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002521,5.74e-10,3;CL:0000228,5.05e-08,1;CL:0002372,5.05e-08,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.07e-26!57;UBERON:0005068!1.07e-26!57;UBERON:0006241!1.07e-26!57;UBERON:0007135!1.07e-26!57;UBERON:0005743!7.29e-26!86;UBERON:0001017!5.56e-25!82;UBERON:0000955!5.76e-25!69;UBERON:0006238!5.76e-25!69;UBERON:0000073!1.40e-22!94;UBERON:0001016!1.40e-22!94;UBERON:0002616!3.99e-22!59;UBERON:0003075!2.00e-21!86;UBERON:0007284!2.00e-21!86;UBERON:0002346!9.94e-20!90;UBERON:0002780!3.41e-19!41;UBERON:0001890!3.41e-19!41;UBERON:0006240!3.41e-19!41;UBERON:0007023!1.12e-18!115;UBERON:0003080!1.70e-18!42;UBERON:0000033!2.97e-16!123;UBERON:0002020!3.91e-16!34;UBERON:0003528!3.91e-16!34;UBERON:0003056!4.34e-16!61;UBERON:0001893!1.06e-15!34;UBERON:0002791!4.79e-15!33;UBERON:0000153!1.12e-14!129;UBERON:0007811!1.12e-14!129;UBERON:0004121!7.01e-14!169;UBERON:0001869!7.28e-14!32;UBERON:0000924!4.17e-13!173;UBERON:0006601!4.17e-13!173;UBERON:0000475!1.18e-11!365;UBERON:0002308!4.95e-11!9;UBERON:0000125!4.95e-11!9;UBERON:0003076!1.87e-09!15;UBERON:0003057!1.87e-09!15;UBERON:0000025!2.53e-09!194;UBERON:0000119!5.52e-09!312;UBERON:0000483!5.85e-09!309;UBERON:0004111!6.79e-09!241;UBERON:0009663!9.78e-09!7;UBERON:0000477!1.34e-08!286;UBERON:0002420!2.26e-08!9;UBERON:0007245!2.26e-08!9;UBERON:0010009!2.26e-08!9;UBERON:0010011!2.26e-08!9;UBERON:0000454!2.26e-08!9;UBERON:0004733!2.34e-08!12;UBERON:0002028!2.34e-08!12;UBERON:0007277!2.34e-08!12;UBERON:0000956!2.44e-08!25;UBERON:0000203!2.44e-08!25;UBERON:0002619!7.09e-08!22;UBERON:0001950!1.45e-07!20;UBERON:0000467!1.54e-07!625;UBERON:0004732!1.65e-07!13;UBERON:0000480!1.83e-07!626;UBERON:0000468!3.85e-07!659;UBERON:0000481!4.50e-07!347;UBERON:0002298!4.94e-07!8;UBERON:0000064!6.82e-07!219 | |||
|ontology_enrichment_uberon_v019=UBERON:0000125;2.12e-18;9!UBERON:0002308;2.12e-18;9!UBERON:0002784;2.93e-16;4!UBERON:0009663;1.60e-15;7!UBERON:0001905;2.79e-15;2!UBERON:0002757;2.79e-15;2!UBERON:0010134;2.79e-15;2!UBERON:0005408;2.79e-15;2!UBERON:0001899;2.79e-15;2!UBERON:0001875;3.29e-14;2!UBERON:0006514;3.29e-14;2!UBERON:0002420;4.11e-12;9!UBERON:0007245;4.11e-12;9!UBERON:0010009;4.11e-12;9!UBERON:0010011;4.11e-12;9!UBERON:0000454;4.11e-12;9!UBERON:0002190;5.23e-10;3!UBERON:0001894;1.66e-09;7!UBERON:0002780;3.60e-08;41!UBERON:0001890;3.60e-08;41!UBERON:0003296;4.55e-08;4!UBERON:0010133;4.55e-08;4!UBERON:0002038;5.97e-08;1!UBERON:0009661;5.97e-08;1!UBERON:0002950;5.97e-08;1!UBERON:0001891;5.97e-08;1!UBERON:0003891;1.53e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000125,1.68e-18,9;UBERON:0002308,1.68e-18,9;UBERON:0002784,2.34e-16,4;UBERON:0009663,1.55e-15,7;UBERON:0001905,2.80e-15,2;UBERON:0002757,2.80e-15,2;UBERON:0010134,2.80e-15,2;UBERON:0005408,2.80e-15,2;UBERON:0001899,2.80e-15,2;UBERON:0001875,2.53e-14,2;UBERON:0006514,2.53e-14,2;UBERON:0003056,2.63e-13,61;UBERON:0003075,4.60e-13,82;UBERON:0007284,4.60e-13,82;UBERON:0002346,2.44e-12,86;UBERON:0001049,2.95e-12,56;UBERON:0005068,2.95e-12,56;UBERON:0006241,2.95e-12,56;UBERON:0007135,2.95e-12,56;UBERON:0002420,4.01e-12,9;UBERON:0007245,4.01e-12,9;UBERON:0010009,4.01e-12,9;UBERON:0010011,4.01e-12,9;UBERON:0000454,4.01e-12,9;UBERON:0002780,1.56e-11,41;UBERON:0001890,1.56e-11,41;UBERON:0003080,1.56e-11,41;UBERON:0006240,1.56e-11,41;UBERON:0010371,2.26e-11,104;UBERON:0000073,9.84e-11,53;UBERON:0002616,9.84e-11,53;UBERON:0002190,5.74e-10,3;UBERON:0001894,1.46e-09,7;UBERON:0006222,1.46e-09,7;UBERON:0001017,2.06e-09,81;UBERON:0007023,7.96e-09,114;UBERON:0003528,1.86e-08,34;UBERON:0002020,1.86e-08,34;UBERON:0010314,2.29e-08,132;UBERON:0001016,2.81e-08,89;UBERON:0003296,4.56e-08,4;UBERON:0010133,4.56e-08,4;UBERON:0000955,6.76e-08,68;UBERON:0006238,6.76e-08,68;UBERON:0002038,7.59e-08,1;UBERON:0009661,7.59e-08,1;UBERON:0002950,7.59e-08,1;UBERON:0001891,7.59e-08,1;UBERON:0009616,7.59e-08,1;UBERON:0010286,7.59e-08,1;UBERON:0004121,1.03e-07,171;UBERON:0000924,1.03e-07,171;UBERON:0006601,1.03e-07,171;UBERON:0003891,2.43e-07,4 | |||
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| ||
|short_description=p4@ROM1 | |||
}} | }} |
Latest revision as of 20:14, 18 September 2015
Short description: | p4@ROM1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_ROM1_5end |
Coexpression cluster: | C24_pineal_eye_retina_retinoblastoma_medulloblastoma_small_cerebral |
Association with transcript: | -295bp_to_ENST00000525947_5end |
EntrezGene: | ROM1 |
HGNC: | 10254 |
UniProt: | E9PMR7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
subcutaneous fat cell | 5.74e-10 | 3 |
multinucleate cell | 5.05e-08 | 1 |
myotube | 5.05e-08 | 1 |