FFCP PHASE1:Hg19::chr8:66750965..66750973,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr8:66750965..66750973,- to FFCP PHASE1:Hg19::chr8:66750965..66750973,-: NSchange) |
No edit summary |
||
(12 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5150 | |EntrezGene=5150 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8791 | |HGNC=8791 | ||
|TSSclassifier=strong | |||
|UniProt=E5RG23 | |UniProt=E5RG23 | ||
|association_with_transcript=9bp_to_ENST00000523253_5end | |||
|cluster_id=chr8:66750965..66750973,- | |||
|coexpression_cluster_id=C18 | |||
|description=CAGE_peak_17_at_PDE7A_5end | |||
|id=chr8:66750965..66750973,- | |||
|ontology_enrichment_celltype=CL:0000791!1.49e-33!18;CL:0000789!1.49e-33!18;CL:0002420!1.49e-33!18;CL:0002419!1.49e-33!18;CL:0000790!1.49e-33!18;CL:0000625!2.38e-23!11;CL:0000084!3.75e-23!25;CL:0000827!3.75e-23!25;CL:0000838!4.73e-14!52;CL:0000624!5.36e-14!6;CL:0000542!1.05e-13!53;CL:0000051!1.05e-13!53;CL:0000842!1.18e-10!3;CL:0000898!1.44e-10!3;CL:0002087!2.10e-10!119;CL:0000738!1.05e-09!140;CL:0000037!3.02e-08!172;CL:0000566!3.02e-08!172;CL:0000224!4.39e-08!4;CL:0000815!8.09e-08!2;CL:0000792!8.09e-08!2;CL:0002677!8.09e-08!2;CL:0000988!1.95e-07!182;CL:0002031!5.64e-07!124 | |||
|ontology_enrichment_celltype_v019=CL:0000791;6.93e-23;18!CL:0000789;6.93e-23;18!CL:0002419;6.93e-23;18!CL:0000624;4.71e-18;6!CL:0000226;1.74e-16;3!CL:0000842;1.74e-16;3!CL:0000084;2.09e-16;25!CL:0000625;4.03e-10;11!CL:0000815;3.92e-07;2!CL:0000792;3.92e-07;2!CL:0002677;3.92e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,7.22e-23,18;CL:0000789,7.22e-23,18;CL:0002420,7.22e-23,18;CL:0002419,7.22e-23,18;CL:0000790,7.22e-23,18;CL:0000624,5.30e-18,6;CL:0000084,2.15e-16,25;CL:0000827,2.15e-16,25;CL:0000226,3.01e-16,3;CL:0000842,3.01e-16,3;CL:0000625,3.91e-10,11;CL:0000838,1.06e-07,52;CL:0000542,1.51e-07,53;CL:0000051,1.51e-07,53;CL:0000815,3.70e-07,2;CL:0000792,3.70e-07,2;CL:0002677,3.70e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000790;6.93e-23;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!2.31e-16!15;UBERON:0000179!2.31e-16!15;UBERON:0000463!2.31e-16!15;UBERON:0002370!2.57e-08!4;UBERON:0005058!2.57e-08!4;UBERON:0009113!2.57e-08!4;UBERON:0003295!2.57e-08!4;UBERON:0005562!2.57e-08!4;UBERON:0000974!5.98e-08!10;UBERON:0004177!1.06e-07!7;UBERON:0000341!5.42e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;1.45e-24;2!UBERON:0005058;1.45e-24;2!UBERON:0009113;1.45e-24;2!UBERON:0004177;2.04e-10;5!UBERON:0005057;2.04e-10;5!UBERON:0002390;7.63e-08;32!UBERON:0000178;1.47e-07;15!UBERON:0000179;1.47e-07;15!UBERON:0000463;1.47e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,6.44e-13,4;UBERON:0005058,6.44e-13,4;UBERON:0009113,6.44e-13,4;UBERON:0003295,6.44e-13,4;UBERON:0005562,6.44e-13,4;UBERON:0003351,6.51e-09,6;UBERON:0004177,9.24e-08,7;UBERON:0005057,9.24e-08,7;UBERON:0000178,1.64e-07,15;UBERON:0000179,1.64e-07,15;UBERON:0000463,1.64e-07,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383829398097213,0.154816123316076,0,0,0,0,0,0,0.553995408531877,0.200544447470142,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.57367816091066,0,1.43921049299656,0.501559486172034,1.62961133316795,0,1.94826728407911,0.334231370655521,0.589211814949674,0,0.541607727530031,0.128091319725675,0.260118695119756,0.986627427622057,0.829050053357545,1.44901542867526,4.59688345802387,5.08327573370455,6.27213142829861,0.793165398882963,0.383220493601921,0,1.26509846009751,1.91139248594458,0.651083453856419,0.950452044448374,1.05402583354441,1.66382594500744,0,0.947109008176067,0,0.80642697289893,0.534880391567015,0.434473211648397,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0.174129737299267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0.385029108839245,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44737618286021,1.07857100409308,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0,0.569647187174163,0.952927101831156,1.64544909234478,0.648473311192717,0.540031437238115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166849141711909,0,0,0,0,0.33307196799782,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123084805461069,0,0,0,0.511572370226872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173858272302579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233939463462106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128915775947154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0.23806443146374,1.93766729508018,2.79336214331361,0,0.0636471582781649,0,0,0,0.404112318087525,0,0,0,0,0,0,0,0,0,0,0.402547587182052,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383829398097213,0.154816123316076,0,0,0,0,0,0,0.553995408531877,0.200544447470142,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.57367816091066,0,1.43921049299656,0.501559486172034,1.62961133316795,0,1.94826728407911,0.334231370655521,0.589211814949674,0,0.541607727530031,0.128091319725675,0.260118695119756,0.986627427622057,0.829050053357545,1.44901542867526,4.59688345802387,5.08327573370455,6.27213142829861,0.793165398882963,0.383220493601921,0,1.26509846009751,1.91139248594458,0.651083453856419,0.950452044448374,1.05402583354441,1.66382594500744,0,0.947109008176067,0,0.80642697289893,0.534880391567015,0.434473211648397,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0.174129737299267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0.385029108839245,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44737618286021,1.07857100409308,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0,0.569647187174163,0.952927101831156,1.64544909234478,0.648473311192717,0.540031437238115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166849141711909,0,0,0,0,0.33307196799782,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123084805461069,0,0,0,0.511572370226872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173858272302579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233939463462106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128915775947154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0.23806443146374,1.93766729508018,2.79336214331361,0,0.0636471582781649,0,0,0,0.404112318087525,0,0,0,0,0,0,0,0,0,0,0.402547587182052,0 | ||
|short_description=p17@PDE7A | |||
}} | }} |
Latest revision as of 20:06, 18 September 2015
Short description: | p17@PDE7A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_17_at_PDE7A_5end |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | 9bp_to_ENST00000523253_5end |
EntrezGene: | PDE7A |
HGNC: | 8791 |
UniProt: | E5RG23 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 7.22e-23 | 18 |
alpha-beta T cell | 7.22e-23 | 18 |
immature T cell | 7.22e-23 | 18 |
mature T cell | 7.22e-23 | 18 |
immature alpha-beta T cell | 7.22e-23 | 18 |
CD4-positive, alpha-beta T cell | 5.30e-18 | 6 |
T cell | 2.15e-16 | 25 |
pro-T cell | 2.15e-16 | 25 |
single nucleate cell | 3.01e-16 | 3 |
mononuclear cell | 3.01e-16 | 3 |
CD8-positive, alpha-beta T cell | 3.91e-10 | 11 |
lymphoid lineage restricted progenitor cell | 1.06e-07 | 52 |
lymphocyte | 1.51e-07 | 53 |
common lymphoid progenitor | 1.51e-07 | 53 |
regulatory T cell | 3.70e-07 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 3.70e-07 | 2 |
naive regulatory T cell | 3.70e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
thymus | 6.44e-13 | 4 |
hemolymphoid system gland | 6.44e-13 | 4 |
thymic region | 6.44e-13 | 4 |
pharyngeal gland | 6.44e-13 | 4 |
thymus primordium | 6.44e-13 | 4 |
pharyngeal epithelium | 6.51e-09 | 6 |
hemopoietic organ | 9.24e-08 | 7 |
immune organ | 9.24e-08 | 7 |
blood | 1.64e-07 | 15 |
haemolymphatic fluid | 1.64e-07 | 15 |
organism substance | 1.64e-07 | 15 |