FFCP PHASE1:Hg19::chr19:46476791..46476819,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr19:46476791..46476819,-
|short_description=p1@NOVA2
|description=CAGE_peak_1_at_NOVA2_5end
|association_with_transcript=-134bp_to_ENST00000263257,NM_002516,u...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4858 | |EntrezGene=4858 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7887 | |HGNC=7887 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UNW9 | |UniProt=Q9UNW9 | ||
|association_with_transcript=-134bp_to_ENST00000263257,NM_002516,uc002pdv.2_5end | |||
|cluster_id=chr19:46476791..46476819,- | |||
|coexpression_cluster_id=C10 | |||
|description=CAGE_peak_1_at_NOVA2_5end | |||
|id=chr19:46476791..46476819,- | |||
|ontology_enrichment_celltype=CL:0002139!3.65e-19!24;CL:0000115!1.29e-17!35;CL:0000071!1.32e-15!18;CL:0002546!1.32e-15!18;CL:0002078!4.21e-14!44;CL:0000213!1.48e-09!57;CL:0000215!1.48e-09!57;CL:1000413!8.76e-09!9;CL:0002319!8.06e-08!25;CL:0000047!3.47e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0002139;8.56e-24;24!CL:0000071;2.72e-19;18!CL:0000115;3.39e-19;36!CL:1000413;1.10e-10;9!CL:0002078;1.79e-10;45!CL:0002544;1.57e-07;6!CL:0002543;4.57e-07;6!CL:0000213;5.58e-07;58!CL:0000215;5.58e-07;58!CL:0000540;7.77e-07;6!CL:0000404;7.77e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,7.17e-24,24;CL:0000115,8.82e-23,36;CL:0000071,2.36e-19,18;CL:0002546,2.36e-19,18;CL:0002078,6.86e-16,45;CL:1000413,1.03e-10,9;CL:0000213,5.76e-10,58;CL:0000215,5.76e-10,58;CL:0000047,1.08e-08,8;CL:0002544,1.58e-07,6;CL:0002543,4.30e-07,6;CL:0000540,8.66e-07,6;CL:0000031,8.66e-07,6;CL:0000404,8.66e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002546;2.72e-19;18!UBERON:0006601;7.25e-12;82!CL:0000031;7.77e-07;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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| ||
|short_description=p1@NOVA2 | |||
}} | }} |
Latest revision as of 19:45, 18 September 2015
Short description: | p1@NOVA2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_NOVA2_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | -134bp_to_ENST00000263257, NM_002516, uc002pdv.2_5end |
EntrezGene: | NOVA2 |
HGNC: | 7887 |
UniProt: | Q9UNW9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 7.17e-24 | 24 |
endothelial cell | 8.82e-23 | 36 |
blood vessel endothelial cell | 2.36e-19 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.36e-19 | 18 |
meso-epithelial cell | 6.86e-16 | 45 |
endothelial cell of artery | 1.03e-10 | 9 |
lining cell | 5.76e-10 | 58 |
barrier cell | 5.76e-10 | 58 |
neuronal stem cell | 1.08e-08 | 8 |
aortic endothelial cell | 1.58e-07 | 6 |
vein endothelial cell | 4.30e-07 | 6 |
neuron | 8.66e-07 | 6 |
neuroblast | 8.66e-07 | 6 |
electrically signaling cell | 8.66e-07 | 6 |