FFCP PHASE1:Hg19::chr8:65489770..65489781,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=401463 | |EntrezGene=401463 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=38bp_to_ENST00000520834,NR_015374,uc003xvg.2_5end | |association_with_transcript=38bp_to_ENST00000520834,NR_015374,uc003xvg.2_5end | ||
|cluster_id=chr8:65489770..65489781,- | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_1_at_LOC401463_5end | |description=CAGE_peak_1_at_LOC401463_5end | ||
|id=chr8:65489770..65489781,- | |id=chr8:65489770..65489781,- | ||
|ontology_enrichment_celltype=CL:0002057!9.37e-60!42;CL:0000860!1.89e-55!45;CL:0002194!1.50e-37!63;CL:0000576!1.50e-37!63;CL:0000040!1.50e-37!63;CL:0000559!1.50e-37!63;CL:0000766!1.31e-36!76;CL:0002009!2.90e-36!65;CL:0000839!2.28e-33!70;CL:0000557!7.75e-33!71;CL:0002087!5.78e-28!119;CL:0000738!4.69e-27!140;CL:0002031!1.28e-26!124;CL:0000763!2.80e-23!112;CL:0000049!2.80e-23!112;CL:0002032!4.42e-22!165;CL:0000837!4.42e-22!165;CL:0000037!6.05e-21!172;CL:0000566!6.05e-21!172;CL:0000988!1.79e-19!182;CL:0000767!3.54e-08!3;CL:0000134!5.60e-07!358;CL:0002320!9.90e-07!365 | |ontology_enrichment_celltype=CL:0002057!9.37e-60!42;CL:0000860!1.89e-55!45;CL:0002194!1.50e-37!63;CL:0000576!1.50e-37!63;CL:0000040!1.50e-37!63;CL:0000559!1.50e-37!63;CL:0000766!1.31e-36!76;CL:0002009!2.90e-36!65;CL:0000839!2.28e-33!70;CL:0000557!7.75e-33!71;CL:0002087!5.78e-28!119;CL:0000738!4.69e-27!140;CL:0002031!1.28e-26!124;CL:0000763!2.80e-23!112;CL:0000049!2.80e-23!112;CL:0002032!4.42e-22!165;CL:0000837!4.42e-22!165;CL:0000037!6.05e-21!172;CL:0000566!6.05e-21!172;CL:0000988!1.79e-19!182;CL:0000767!3.54e-08!3;CL:0000134!5.60e-07!358;CL:0002320!9.90e-07!365 | ||
|ontology_enrichment_celltype_v019=CL:0000860;3.07e-53;33!CL:0002057;3.07e-53;33!CL:0000473;1.48e-38;39!CL:0000234;1.48e-38;39!CL:0000576;2.46e-30;48!CL:0000766;1.03e-22;69!CL:0002087;1.53e-13;104!CL:0000763;6.44e-12;100!CL:0002393;9.45e-09;6!CL:0002397;9.45e-09;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,8.24e-61,42;CL:0002057,8.24e-61,42;CL:0000473,5.22e-53,48;CL:0000234,5.22e-53,48;CL:0002194,4.46e-42,59;CL:0000576,4.46e-42,59;CL:0000040,4.46e-42,59;CL:0000559,4.46e-42,59;CL:0002009,1.15e-40,61;CL:0000839,1.67e-37,66;CL:0000557,6.29e-37,67;CL:0000766,2.79e-34,72;CL:0000763,2.27e-22,108;CL:0000049,2.27e-22,108;CL:0002087,6.55e-21,115;CL:0002031,5.72e-20,120;CL:0000738,2.03e-17,136;CL:0002032,1.96e-14,161;CL:0000837,1.96e-14,161;CL:0000037,9.36e-14,168;CL:0000988,5.84e-13,177 | |||
|ontology_enrichment_development_v019=CL:0002057;9.14e-43;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.74e-31!80;UBERON:0001474!5.76e-29!86;UBERON:0004765!5.79e-24!101;UBERON:0001434!5.79e-24!101;UBERON:0002390!1.11e-23!102;UBERON:0003061!1.11e-23!102;UBERON:0002193!3.87e-21!112;UBERON:0002405!1.84e-20!115;UBERON:0002204!6.78e-14!167;UBERON:0000349!3.99e-10!5;UBERON:0003081!1.27e-08!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0001954;5.28e-07;2!UBERON:0001875;5.28e-07;2!UBERON:0003022;5.28e-07;2!UBERON:0002421;5.28e-07;2!UBERON:0006514;5.28e-07;2!UBERON:0002600;5.28e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.07e-32,76;UBERON:0001474,6.10e-30,82;UBERON:0004765,3.74e-27,90;UBERON:0002405,3.14e-26,93;UBERON:0002390,8.17e-25,98;UBERON:0003061,8.17e-25,98;UBERON:0001434,2.75e-24,100;UBERON:0002193,2.27e-22,108;UBERON:0002204,7.55e-14,167;UBERON:0003081,4.70e-11,203;UBERON:0001954,4.98e-07,2;UBERON:0003022,4.98e-07,2;UBERON:0002421,4.98e-07,2;UBERON:0002600,4.98e-07,2;UBERON:0001875,5.28e-07,2;UBERON:0006514,5.28e-07,2 | |||
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|short_description=p1@LOC401463 | |short_description=p1@LOC401463 | ||
}} | }} |
Latest revision as of 19:16, 18 September 2015
Short description: | p1@LOC401463 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LOC401463_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | 38bp_to_ENST00000520834, NR_015374, uc003xvg.2_5end |
EntrezGene: | LOC401463 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 8.24e-61 | 42 |
CD14-positive, CD16-negative classical monocyte | 8.24e-61 | 42 |
defensive cell | 5.22e-53 | 48 |
phagocyte | 5.22e-53 | 48 |
monopoietic cell | 4.46e-42 | 59 |
monocyte | 4.46e-42 | 59 |
monoblast | 4.46e-42 | 59 |
promonocyte | 4.46e-42 | 59 |
macrophage dendritic cell progenitor | 1.15e-40 | 61 |
myeloid lineage restricted progenitor cell | 1.67e-37 | 66 |
granulocyte monocyte progenitor cell | 6.29e-37 | 67 |
myeloid leukocyte | 2.79e-34 | 72 |
myeloid cell | 2.27e-22 | 108 |
common myeloid progenitor | 2.27e-22 | 108 |
nongranular leukocyte | 6.55e-21 | 115 |
hematopoietic lineage restricted progenitor cell | 5.72e-20 | 120 |
leukocyte | 2.03e-17 | 136 |
hematopoietic oligopotent progenitor cell | 1.96e-14 | 161 |
hematopoietic multipotent progenitor cell | 1.96e-14 | 161 |
hematopoietic stem cell | 9.36e-14 | 168 |
hematopoietic cell | 5.84e-13 | 177 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.07e-32 | 76 |
bone element | 6.10e-30 | 82 |
skeletal element | 3.74e-27 | 90 |
immune system | 3.14e-26 | 93 |
hematopoietic system | 8.17e-25 | 98 |
blood island | 8.17e-25 | 98 |
skeletal system | 2.75e-24 | 100 |
hemolymphoid system | 2.27e-22 | 108 |
musculoskeletal system | 7.55e-14 | 167 |
lateral plate mesoderm | 4.70e-11 | 203 |
Ammon's horn | 4.98e-07 | 2 |
lobe parts of cerebral cortex | 4.98e-07 | 2 |
hippocampal formation | 4.98e-07 | 2 |
limbic lobe | 4.98e-07 | 2 |
globus pallidus | 5.28e-07 | 2 |
pallidum | 5.28e-07 | 2 |