FFCP PHASE1:Hg19::chr5:76011712..76011734,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2149 | |EntrezGene=2149 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3537 | |HGNC=3537 | ||
|TSSclassifier=strong | |||
|UniProt=P25116,Q2TNB2 | |UniProt=P25116,Q2TNB2 | ||
|association_with_transcript=-133bp_to_ENST00000319211,NM_001992,uc003ken.3_5end | |association_with_transcript=-133bp_to_ENST00000319211,NM_001992,uc003ken.3_5end | ||
|cluster_id=chr5:76011712..76011734,+ | |||
|description=CAGE_peak_2_at_F2R_5end | |description=CAGE_peak_2_at_F2R_5end | ||
|id=chr5:76011712..76011734,+ | |id=chr5:76011712..76011734,+ | ||
|ontology_enrichment_celltype=CL:0000222!1.34e-24!119;CL:0000055!3.46e-24!180;CL:0000220!3.73e-21!246;CL:0002371!7.10e-21!591;CL:0002321!1.89e-20!248;CL:0000144!6.12e-19!625;CL:0000057!2.12e-14!75;CL:0000548!2.40e-14!679;CL:0000004!2.40e-14!679;CL:0000255!2.40e-14!679;CL:0000183!2.74e-14!59;CL:0000187!2.87e-14!54;CL:0000012!4.82e-14!682;CL:0000680!4.95e-14!57;CL:0000056!4.95e-14!57;CL:0000355!4.95e-14!57;CL:0002139!1.69e-12!24;CL:0000115!2.15e-12!35;CL:0000192!6.82e-12!42;CL:0000514!6.82e-12!42;CL:0000393!9.31e-12!60;CL:0000211!9.31e-12!60;CL:0002078!8.42e-11!44;CL:0000071!1.58e-10!18;CL:0002546!1.58e-10!18;CL:0000359!2.64e-10!32;CL:0000213!4.35e-09!57;CL:0000215!4.35e-09!57;CL:1000449!5.85e-08!16;CL:0002334!6.46e-08!12;CL:0000076!7.90e-08!62;CL:0002494!8.33e-08!16;CL:0000003!1.36e-07!722;CL:1000497!4.59e-07!18;CL:0002518!4.59e-07!18;CL:0002681!6.88e-07!13;CL:0002584!6.88e-07!13;CL:1000413!7.58e-07!9 | |ontology_enrichment_celltype=CL:0000222!1.34e-24!119;CL:0000055!3.46e-24!180;CL:0000220!3.73e-21!246;CL:0002371!7.10e-21!591;CL:0002321!1.89e-20!248;CL:0000144!6.12e-19!625;CL:0000057!2.12e-14!75;CL:0000548!2.40e-14!679;CL:0000004!2.40e-14!679;CL:0000255!2.40e-14!679;CL:0000183!2.74e-14!59;CL:0000187!2.87e-14!54;CL:0000012!4.82e-14!682;CL:0000680!4.95e-14!57;CL:0000056!4.95e-14!57;CL:0000355!4.95e-14!57;CL:0002139!1.69e-12!24;CL:0000115!2.15e-12!35;CL:0000192!6.82e-12!42;CL:0000514!6.82e-12!42;CL:0000393!9.31e-12!60;CL:0000211!9.31e-12!60;CL:0002078!8.42e-11!44;CL:0000071!1.58e-10!18;CL:0002546!1.58e-10!18;CL:0000359!2.64e-10!32;CL:0000213!4.35e-09!57;CL:0000215!4.35e-09!57;CL:1000449!5.85e-08!16;CL:0002334!6.46e-08!12;CL:0000076!7.90e-08!62;CL:0002494!8.33e-08!16;CL:0000003!1.36e-07!722;CL:1000497!4.59e-07!18;CL:0002518!4.59e-07!18;CL:0002681!6.88e-07!13;CL:0002584!6.88e-07!13;CL:1000413!7.58e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0002139;1.90e-15;24!CL:0000115;4.17e-14;36!CL:0000071;7.61e-13;18!CL:0000359;8.64e-12;32!CL:0000192;2.80e-11;43!CL:0002334;5.28e-10;12!CL:0002078;1.23e-09;45!CL:0002494;2.59e-09;16!CL:1000449;7.89e-09;15!CL:1000413;1.09e-08;9!CL:0000187;1.80e-08;55!CL:0002681;2.41e-07;12!CL:0002584;2.41e-07;12!CL:1000497;2.85e-07;17!CL:0002518;2.85e-07;17!CL:0000393;8.12e-07;61!CL:0000211;8.12e-07;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,1.11e-26,121;CL:0002321,1.15e-17,250;CL:0000115,4.78e-16,36;CL:0002139,1.16e-15,24;CL:0002078,9.30e-15,45;CL:0000680,1.05e-14,58;CL:0000056,1.05e-14,58;CL:0000355,1.05e-14,58;CL:0000192,1.14e-14,43;CL:0000514,1.14e-14,43;CL:0000187,1.24e-14,55;CL:0000071,6.46e-13,18;CL:0002546,6.46e-13,18;CL:0000359,4.87e-12,32;CL:0000393,7.27e-12,61;CL:0000211,7.27e-12,61;CL:0000057,2.00e-11,76;CL:0002334,2.62e-10,12;CL:0000213,9.01e-10,58;CL:0000215,9.01e-10,58;CL:0002494,2.77e-09,16;CL:0000723,5.87e-09,433;CL:1000413,7.67e-09,9;CL:1000449,9.46e-09,15;CL:0000048,3.16e-08,427;CL:0000034,4.23e-08,441;CL:0002681,2.82e-07,12;CL:0002584,2.82e-07,12;CL:1000497,3.32e-07,17;CL:0002518,3.32e-07,17;CL:0000076,5.69e-07,63 | |||
|ontology_enrichment_development_v019=CL:0002546;7.61e-13;18!CL:0000514;2.80e-11;43!CL:0000222;2.79e-08;121!CL:0000355;5.79e-08;58 | |||
|ontology_enrichment_disease=DOID:2394!4.51e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;7.22e-10;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,6.18e-10,14 | |||
|ontology_enrichment_uberon=UBERON:0003914!4.58e-27!118;UBERON:0004872!7.77e-26!84;UBERON:0002049!3.20e-24!79;UBERON:0007798!3.20e-24!79;UBERON:0000055!5.66e-24!69;UBERON:0001981!1.86e-21!60;UBERON:0007500!1.86e-21!60;UBERON:0004537!1.86e-21!60;UBERON:0006965!1.86e-21!60;UBERON:0001009!9.87e-21!113;UBERON:0004535!1.11e-20!110;UBERON:0005256!1.51e-19!143;UBERON:0001637!2.41e-18!42;UBERON:0003509!2.41e-18!42;UBERON:0004572!2.41e-18!42;UBERON:0000490!7.45e-18!138;UBERON:0002100!1.73e-17!216;UBERON:0000914!3.35e-17!83;UBERON:0002329!3.35e-17!83;UBERON:0003077!3.35e-17!83;UBERON:0003059!3.35e-17!83;UBERON:0007282!3.35e-17!83;UBERON:0009618!3.35e-17!83;UBERON:0007285!3.35e-17!83;UBERON:0004573!5.96e-15!33;UBERON:0004571!5.96e-15!33;UBERON:0004290!2.14e-14!70;UBERON:0000486!6.22e-14!82;UBERON:0001134!6.93e-13!61;UBERON:0002036!6.93e-13!61;UBERON:0003082!6.93e-13!61;UBERON:0002385!1.33e-12!63;UBERON:0001015!1.33e-12!63;UBERON:0000383!1.33e-12!63;UBERON:0000483!2.04e-12!309;UBERON:0000119!2.10e-12!312;UBERON:0000475!7.08e-12!365;UBERON:0000487!3.61e-11!22;UBERON:0003103!1.40e-10!69;UBERON:0001986!1.58e-10!18;UBERON:0004638!1.58e-10!18;UBERON:0004852!1.58e-10!18;UBERON:0000477!2.17e-10!286;UBERON:0004111!4.21e-10!241;UBERON:0003102!6.11e-10!95;UBERON:0000947!1.16e-09!21;UBERON:0010191!1.16e-09!21;UBERON:0003104!1.34e-09!238;UBERON:0009142!1.34e-09!238;UBERON:0000480!5.59e-09!626;UBERON:0000467!8.95e-09!625;UBERON:0000468!1.47e-08!659;UBERON:0006914!1.79e-08!25;UBERON:0000353!2.81e-08!17;UBERON:0000948!5.38e-08!24;UBERON:0005498!5.38e-08!24;UBERON:0004140!5.38e-08!24;UBERON:0009881!5.38e-08!24;UBERON:0004141!5.38e-08!24;UBERON:0003084!5.38e-08!24;UBERON:0007005!5.38e-08!24;UBERON:0004139!5.38e-08!24;UBERON:0004291!5.38e-08!24;UBERON:0004211!5.85e-08!16;UBERON:0001285!5.85e-08!16;UBERON:0007684!5.85e-08!16;UBERON:0003220!5.85e-08!16;UBERON:0004208!5.85e-08!16;UBERON:0000926!6.06e-08!448;UBERON:0004120!6.06e-08!448;UBERON:0006603!6.06e-08!448;UBERON:0007100!7.66e-08!27;UBERON:0006555!1.02e-07!17;UBERON:0005103!1.02e-07!17;UBERON:0000083!1.02e-07!17;UBERON:0009201!1.02e-07!17;UBERON:0004819!1.02e-07!17;UBERON:0006553!1.02e-07!17;UBERON:0003074!1.02e-07!17;UBERON:0003060!1.02e-07!17;UBERON:0003886!1.34e-07!63;UBERON:0003887!1.78e-07!21;UBERON:0000481!2.41e-07!347;UBERON:0001225!6.88e-07!13;UBERON:0008987!6.88e-07!13;UBERON:0000080!7.46e-07!18;UBERON:0002120!7.46e-07!18;UBERON:0004875!7.46e-07!18;UBERON:0005721!7.46e-07!18;UBERON:0005754!7.46e-07!18;UBERON:0007297!7.46e-07!18;UBERON:0003915!7.58e-07!9;UBERON:0004700!7.58e-07!9;UBERON:0001917!7.58e-07!9 | |||
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| ||
|short_description=p2@F2R | |short_description=p2@F2R | ||
}} | }} |
Latest revision as of 18:41, 18 September 2015
Short description: | p2@F2R |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_F2R_5end |
Coexpression cluster: | NA |
Association with transcript: | -133bp_to_ENST00000319211, NM_001992, uc003ken.3_5end |
EntrezGene: | F2R |
HGNC: | 3537 |
UniProt: | P25116Q2TNB2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 1.11e-26 | 121 |
embryonic cell | 1.15e-17 | 250 |
endothelial cell | 4.78e-16 | 36 |
endothelial cell of vascular tree | 1.16e-15 | 24 |
meso-epithelial cell | 9.30e-15 | 45 |
muscle precursor cell | 1.05e-14 | 58 |
myoblast | 1.05e-14 | 58 |
multi-potent skeletal muscle stem cell | 1.05e-14 | 58 |
smooth muscle cell | 1.14e-14 | 43 |
smooth muscle myoblast | 1.14e-14 | 43 |
muscle cell | 1.24e-14 | 55 |
blood vessel endothelial cell | 6.46e-13 | 18 |
embryonic blood vessel endothelial progenitor cell | 6.46e-13 | 18 |
vascular associated smooth muscle cell | 4.87e-12 | 32 |
electrically responsive cell | 7.27e-12 | 61 |
electrically active cell | 7.27e-12 | 61 |
fibroblast | 2.00e-11 | 76 |
preadipocyte | 2.62e-10 | 12 |
lining cell | 9.01e-10 | 58 |
barrier cell | 9.01e-10 | 58 |
cardiocyte | 2.77e-09 | 16 |
somatic stem cell | 5.87e-09 | 433 |
endothelial cell of artery | 7.67e-09 | 9 |
epithelial cell of nephron | 9.46e-09 | 15 |
multi fate stem cell | 3.16e-08 | 427 |
stem cell | 4.23e-08 | 441 |
kidney cortical cell | 2.82e-07 | 12 |
renal cortical epithelial cell | 2.82e-07 | 12 |
kidney cell | 3.32e-07 | 17 |
kidney epithelial cell | 3.32e-07 | 17 |
squamous epithelial cell | 5.69e-07 | 63 |
Ontology term | p-value | n |
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