FFCP PHASE1:Hg19::chr5:75379158..75379169,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=22987 | |EntrezGene=22987 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30670 | |HGNC=30670 | ||
|TSSclassifier=strong | |||
|UniProt=Q496J9 | |UniProt=Q496J9 | ||
|association_with_transcript=-69bp_to_ENST00000322285_5end | |association_with_transcript=-69bp_to_ENST00000322285_5end | ||
|cluster_id=chr5:75379158..75379169,+ | |||
|coexpression_cluster_id=C3080 | |||
|description=CAGE_peak_4_at_SV2C_5end | |description=CAGE_peak_4_at_SV2C_5end | ||
|id=chr5:75379158..75379169,+ | |id=chr5:75379158..75379169,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000333;2.63e-12;5 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;3.02e-16;82!UBERON:0010122;4.10e-15;2!UBERON:0006241;3.26e-10;3!UBERON:0003057;3.26e-10;3!UBERON:0006215;1.22e-09;3!UBERON:0006222;3.57e-08;1 | |||
|ontology_enrichment_disease=DOID:3095!4.41e-08!22;DOID:2994!4.41e-08!22;DOID:171!9.00e-08!10 | |ontology_enrichment_disease=DOID:3095!4.41e-08!22;DOID:2994!4.41e-08!22;DOID:171!9.00e-08!10 | ||
|ontology_enrichment_disease_v019=DOID:169;2.42e-10;6 | |||
|ontology_enrichment_disease_v019_2=DOID:169,2.94e-10,6 | |||
|ontology_enrichment_uberon=UBERON:0001049!1.50e-65!57;UBERON:0005068!1.50e-65!57;UBERON:0006241!1.50e-65!57;UBERON:0007135!1.50e-65!57;UBERON:0000073!1.68e-55!94;UBERON:0001016!1.68e-55!94;UBERON:0002616!3.99e-53!59;UBERON:0001017!6.18e-53!82;UBERON:0005743!2.72e-52!86;UBERON:0000955!1.66e-50!69;UBERON:0006238!1.66e-50!69;UBERON:0002346!6.73e-50!90;UBERON:0003075!3.48e-48!86;UBERON:0007284!3.48e-48!86;UBERON:0002020!4.02e-46!34;UBERON:0003528!4.02e-46!34;UBERON:0002780!6.31e-46!41;UBERON:0001890!6.31e-46!41;UBERON:0006240!6.31e-46!41;UBERON:0001893!1.84e-45!34;UBERON:0003080!1.24e-44!42;UBERON:0002791!2.51e-43!33;UBERON:0007023!4.06e-43!115;UBERON:0001869!6.66e-42!32;UBERON:0001950!1.71e-31!20;UBERON:0002619!2.04e-31!22;UBERON:0003056!3.74e-30!61;UBERON:0000924!5.77e-30!173;UBERON:0006601!5.77e-30!173;UBERON:0004121!2.28e-28!169;UBERON:0000033!2.73e-27!123;UBERON:0000956!3.78e-27!25;UBERON:0000203!3.78e-27!25;UBERON:0000153!1.93e-25!129;UBERON:0007811!1.93e-25!129;UBERON:0002308!6.74e-22!9;UBERON:0000125!6.74e-22!9;UBERON:0003076!1.84e-21!15;UBERON:0003057!1.84e-21!15;UBERON:0002420!3.52e-21!9;UBERON:0007245!3.52e-21!9;UBERON:0010009!3.52e-21!9;UBERON:0010011!3.52e-21!9;UBERON:0000454!3.52e-21!9;UBERON:0009663!2.99e-17!7;UBERON:0000025!1.11e-16!194;UBERON:0004733!3.62e-15!12;UBERON:0002028!3.62e-15!12;UBERON:0007277!3.62e-15!12;UBERON:0002298!1.82e-14!8;UBERON:0004732!7.65e-14!13;UBERON:0004111!5.15e-13!241;UBERON:0002021!1.65e-11!5;UBERON:0000369!4.23e-11!4;UBERON:0002435!4.23e-11!4;UBERON:0000204!4.23e-11!4;UBERON:0010082!4.23e-11!4;UBERON:0000200!4.90e-10!6;UBERON:0000064!5.60e-10!219;UBERON:0001871!1.54e-09!7;UBERON:0000477!1.65e-09!286;UBERON:0002680!1.95e-09!9;UBERON:0001895!1.95e-09!9;UBERON:0010092!1.95e-09!9;UBERON:0005383!9.21e-09!3;UBERON:0005382!9.21e-09!3;UBERON:0000922!1.30e-08!612;UBERON:0000988!1.66e-08!3;UBERON:0000923!2.04e-08!604;UBERON:0005291!2.04e-08!604;UBERON:0006598!2.04e-08!604;UBERON:0002532!2.04e-08!604;UBERON:0002240!2.06e-08!3;UBERON:0002050!2.27e-08!605;UBERON:0005423!2.27e-08!605;UBERON:0001872!3.03e-08!5;UBERON:0006331!3.10e-08!3;UBERON:0001896!5.33e-08!3;UBERON:0005290!5.33e-08!3;UBERON:0010096!5.33e-08!3;UBERON:0000062!6.85e-08!511;UBERON:0000013!7.14e-08!5;UBERON:0002410!7.14e-08!5;UBERON:0000349!1.35e-07!5;UBERON:0000483!1.79e-07!309;UBERON:0000119!2.76e-07!312;UBERON:0000467!6.18e-07!625;UBERON:0000480!6.82e-07!626 | |ontology_enrichment_uberon=UBERON:0001049!1.50e-65!57;UBERON:0005068!1.50e-65!57;UBERON:0006241!1.50e-65!57;UBERON:0007135!1.50e-65!57;UBERON:0000073!1.68e-55!94;UBERON:0001016!1.68e-55!94;UBERON:0002616!3.99e-53!59;UBERON:0001017!6.18e-53!82;UBERON:0005743!2.72e-52!86;UBERON:0000955!1.66e-50!69;UBERON:0006238!1.66e-50!69;UBERON:0002346!6.73e-50!90;UBERON:0003075!3.48e-48!86;UBERON:0007284!3.48e-48!86;UBERON:0002020!4.02e-46!34;UBERON:0003528!4.02e-46!34;UBERON:0002780!6.31e-46!41;UBERON:0001890!6.31e-46!41;UBERON:0006240!6.31e-46!41;UBERON:0001893!1.84e-45!34;UBERON:0003080!1.24e-44!42;UBERON:0002791!2.51e-43!33;UBERON:0007023!4.06e-43!115;UBERON:0001869!6.66e-42!32;UBERON:0001950!1.71e-31!20;UBERON:0002619!2.04e-31!22;UBERON:0003056!3.74e-30!61;UBERON:0000924!5.77e-30!173;UBERON:0006601!5.77e-30!173;UBERON:0004121!2.28e-28!169;UBERON:0000033!2.73e-27!123;UBERON:0000956!3.78e-27!25;UBERON:0000203!3.78e-27!25;UBERON:0000153!1.93e-25!129;UBERON:0007811!1.93e-25!129;UBERON:0002308!6.74e-22!9;UBERON:0000125!6.74e-22!9;UBERON:0003076!1.84e-21!15;UBERON:0003057!1.84e-21!15;UBERON:0002420!3.52e-21!9;UBERON:0007245!3.52e-21!9;UBERON:0010009!3.52e-21!9;UBERON:0010011!3.52e-21!9;UBERON:0000454!3.52e-21!9;UBERON:0009663!2.99e-17!7;UBERON:0000025!1.11e-16!194;UBERON:0004733!3.62e-15!12;UBERON:0002028!3.62e-15!12;UBERON:0007277!3.62e-15!12;UBERON:0002298!1.82e-14!8;UBERON:0004732!7.65e-14!13;UBERON:0004111!5.15e-13!241;UBERON:0002021!1.65e-11!5;UBERON:0000369!4.23e-11!4;UBERON:0002435!4.23e-11!4;UBERON:0000204!4.23e-11!4;UBERON:0010082!4.23e-11!4;UBERON:0000200!4.90e-10!6;UBERON:0000064!5.60e-10!219;UBERON:0001871!1.54e-09!7;UBERON:0000477!1.65e-09!286;UBERON:0002680!1.95e-09!9;UBERON:0001895!1.95e-09!9;UBERON:0010092!1.95e-09!9;UBERON:0005383!9.21e-09!3;UBERON:0005382!9.21e-09!3;UBERON:0000922!1.30e-08!612;UBERON:0000988!1.66e-08!3;UBERON:0000923!2.04e-08!604;UBERON:0005291!2.04e-08!604;UBERON:0006598!2.04e-08!604;UBERON:0002532!2.04e-08!604;UBERON:0002240!2.06e-08!3;UBERON:0002050!2.27e-08!605;UBERON:0005423!2.27e-08!605;UBERON:0001872!3.03e-08!5;UBERON:0006331!3.10e-08!3;UBERON:0001896!5.33e-08!3;UBERON:0005290!5.33e-08!3;UBERON:0010096!5.33e-08!3;UBERON:0000062!6.85e-08!511;UBERON:0000013!7.14e-08!5;UBERON:0002410!7.14e-08!5;UBERON:0000349!1.35e-07!5;UBERON:0000483!1.79e-07!309;UBERON:0000119!2.76e-07!312;UBERON:0000467!6.18e-07!625;UBERON:0000480!6.82e-07!626 | ||
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| ||
|short_description=p4@SV2C | |short_description=p4@SV2C | ||
}} | }} |
Latest revision as of 17:46, 18 September 2015
Short description: | p4@SV2C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SV2C_5end |
Coexpression cluster: | C3080_locus_putamen_caudate_globus_medulla_nucleus_diencephalon |
Association with transcript: | -69bp_to_ENST00000322285_5end |
EntrezGene: | SV2C |
HGNC: | 30670 |
UniProt: | Q496J9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 2.94e-10 | 6 |