FFCP PHASE1:Hg19::chr21:45509347..45509382,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7109 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11868 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000465905,ENST00000483973,uc011afb.1_5end | |||
|cluster_id=chr21:45509347..45509382,+ | |||
|coexpression_cluster_id=C2435 | |||
|description=CAGE_peak_6_at_TRAPPC10_5end | |||
|id=chr21:45509347..45509382,+ | |||
|ontology_enrichment_celltype=CL:0000236!5.31e-17!14;CL:0000838!1.51e-11!52;CL:0000945!2.51e-11!24;CL:0000826!2.51e-11!24;CL:0000542!2.96e-11!53;CL:0000051!2.96e-11!53;CL:0000624!1.54e-08!6;CL:0000815!1.94e-07!2;CL:0000792!1.94e-07!2;CL:0002677!1.94e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0000313;2.11e-14;1!CL:0000236;1.04e-09;13!CL:0000159;7.52e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000313,1.84e-14,1;CL:0000236,5.08e-09,14;CL:0000159,7.03e-08,2 | |||
|ontology_enrichment_development_v019=UBERON:0001045;2.11e-14;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2152;2.11e-14;1 | |||
|ontology_enrichment_disease_v019_2=DOID:2152,1.84e-14,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000160;3.09e-26;17!UBERON:0002108;1.65e-24;4!UBERON:0005409;1.70e-20;22!UBERON:0001154;2.11e-14;1!UBERON:0001153;2.11e-14;1!UBERON:0004911;2.11e-14;1!UBERON:0009854;2.11e-14;1!UBERON:0001155;6.45e-14;9!UBERON:0004921;1.56e-12;33!UBERON:0000059;1.70e-11;11!UBERON:0004909;7.52e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.71e-26,17;UBERON:0002108,1.30e-24,4;UBERON:0005409,3.81e-18,25;UBERON:0004911,1.84e-14,1;UBERON:0001154,2.41e-14,1;UBERON:0001153,2.41e-14,1;UBERON:0001045,2.41e-14,1;UBERON:0001155,6.45e-14,9;UBERON:0000059,1.70e-11,11;UBERON:0004909,7.03e-08,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344745680736619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0.426730222566507,0.800791974072025,1.14950487990897,0.661044872784862,0,1.70763890732835,2.34894875748376,0.382273228125229,0,0.560508562981536,0,0,0.393010762749165,0.411202997999018,0.167186495390678,0.651844533267181,0,1.94826728407911,0.111410456885174,0.589211814949674,0.221533894583621,0,0,0.130059347559878,0.164437904603676,0.276350017785848,0.289803085735052,0,0,0,0,0,0,0.506039384039006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.40545596294053,0,0,0,0,0,0.238490624305342,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368965315629341,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0.646882724578552,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.620304078368662,0,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0.507447609232169,0,0,0,0.411362273086194,0,0.540031437238115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,1.38141957765574,0.755798243562828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.38835424159016,3.66618086960175,0,0,0,0,0,0,0.364909578431332,0,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0.284609546029793,0,0,0,0,0,0,0,0,0,0,0,0,0.137041924646751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.77729082773104,5.14054963722981,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0,0,0,0,0,0,0,0.487170393523584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464033759878494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.76872455576384,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.781514011233092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47775168788705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.78968690876468,0,0.731507549893617,0,0,0,0,0,0,0,0,0,0,3.70435958918134,1.96703604453562,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0.458729283404541,0,0,0,0,2.1161073620616,0,0,0,0,0,0,0,0,0.0918948995348449,0,0,0,0,0,0,0,0.0645889098360061,0.248298857183432,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0.244482888365733,0,0,0,0 | |||
|short_description=p6@TRAPPC10 | |||
}} |
Latest revision as of 17:38, 18 September 2015
Short description: | p6@TRAPPC10 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_TRAPPC10_5end |
Coexpression cluster: | C2435_kidney_colon_small_temporal_duodenum_Hepatocyte_Intestinal |
Association with transcript: | 0bp_to_ENST00000465905, ENST00000483973, uc011afb.1_5end |
EntrezGene: | TRAPPC10 |
HGNC: | 11868 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
serous secreting cell | 1.84e-14 | 1 |
B cell | 5.08e-09 | 14 |
seromucus secreting cell | 7.03e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
intestine | 2.71e-26 | 17 |
small intestine | 1.30e-24 | 4 |
gastrointestinal system | 3.81e-18 | 25 |
epithelium of female gonad | 1.84e-14 | 1 |
vermiform appendix | 2.41e-14 | 1 |
caecum | 2.41e-14 | 1 |
midgut | 2.41e-14 | 1 |
colon | 6.45e-14 | 9 |
large intestine | 1.70e-11 | 11 |
epithelium of gonad | 7.03e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
ovary epithelial cancer | 1.84e-14 | 1 |