FFCP PHASE1:Hg19::chr17:9940017..9940031,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr17:9940017..9940031,- to FFCP PHASE1:Hg19::chr17:9940017..9940031,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=8522 | |EntrezGene=8522 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4169 | |HGNC=4169 | ||
|TSSclassifier=strong | |||
|UniProt=A8KAC2,O60861 | |UniProt=A8KAC2,O60861 | ||
|association_with_transcript=32bp_to_ENST00000396115,NM_201432,uc002gmj.1_5end | |||
|cluster_id=chr17:9940017..9940031,- | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_22_at_GAS7_5end | |||
|id=chr17:9940017..9940031,- | |||
|ontology_enrichment_celltype=CL:0000148!1.35e-07!10;CL:0000541!1.35e-07!10 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.23e-18;82!UBERON:0006241;5.43e-13;3!UBERON:0003057;5.43e-13;3!UBERON:0005062;3.84e-09;4!UBERON:0007284;3.84e-09;4!UBERON:0002532;8.57e-07;206!UBERON:0010316;8.57e-07;206 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.37e-91!115;UBERON:0001049!1.23e-50!57;UBERON:0005068!1.23e-50!57;UBERON:0006241!1.23e-50!57;UBERON:0007135!1.23e-50!57;UBERON:0002616!1.27e-40!59;UBERON:0003075!2.42e-37!86;UBERON:0007284!2.42e-37!86;UBERON:0002780!2.03e-36!41;UBERON:0001890!2.03e-36!41;UBERON:0006240!2.03e-36!41;UBERON:0003080!2.58e-35!42;UBERON:0001017!3.06e-35!82;UBERON:0002346!5.49e-35!90;UBERON:0005743!1.26e-34!86;UBERON:0000955!3.62e-34!69;UBERON:0006238!3.62e-34!69;UBERON:0000073!1.04e-31!94;UBERON:0001016!1.04e-31!94;UBERON:0002020!4.87e-31!34;UBERON:0003528!4.87e-31!34;UBERON:0001893!5.47e-31!34;UBERON:0002791!1.78e-29!33;UBERON:0001869!1.10e-27!32;UBERON:0003056!8.45e-23!61;UBERON:0002619!6.03e-21!22;UBERON:0004121!4.55e-19!169;UBERON:0000033!1.35e-18!123;UBERON:0000924!3.01e-18!173;UBERON:0006601!3.01e-18!173;UBERON:0000025!3.02e-18!194;UBERON:0001950!3.68e-18!20;UBERON:0000153!5.39e-18!129;UBERON:0007811!5.39e-18!129;UBERON:0000956!7.02e-18!25;UBERON:0000203!7.02e-18!25;UBERON:0004111!3.96e-16!241;UBERON:0003076!4.44e-16!15;UBERON:0003057!4.44e-16!15;UBERON:0002308!5.08e-16!9;UBERON:0000125!5.08e-16!9;UBERON:0002420!1.92e-15!9;UBERON:0007245!1.92e-15!9;UBERON:0010009!1.92e-15!9;UBERON:0010011!1.92e-15!9;UBERON:0000454!1.92e-15!9;UBERON:0004732!7.33e-13!13;UBERON:0009663!1.44e-12!7;UBERON:0000477!6.87e-12!286;UBERON:0002298!7.23e-12!8;UBERON:0000062!2.14e-11!511;UBERON:0004733!3.15e-11!12;UBERON:0002028!3.15e-11!12;UBERON:0007277!3.15e-11!12;UBERON:0000200!1.53e-10!6;UBERON:0000483!1.62e-09!309;UBERON:0000119!2.93e-09!312;UBERON:0000349!4.01e-09!5;UBERON:0001871!1.51e-07!7;UBERON:0007100!1.57e-07!27;UBERON:0000369!1.72e-07!4;UBERON:0002435!1.72e-07!4;UBERON:0000204!1.72e-07!4;UBERON:0010082!1.72e-07!4;UBERON:0000481!6.10e-07!347;UBERON:0002240!6.15e-07!3;UBERON:0006331!6.27e-07!3;UBERON:0001896!7.41e-07!3;UBERON:0005290!7.41e-07!3;UBERON:0010096!7.41e-07!3;UBERON:0001894!8.73e-07!7;UBERON:0006222!8.73e-07!7;UBERON:0000988!8.91e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0000073;6.65e-34;53!UBERON:0002616;6.65e-34;53!UBERON:0002780;1.52e-33;41!UBERON:0001890;1.52e-33;41!UBERON:0001893;6.54e-31;34!UBERON:0003528;1.12e-29;34!UBERON:0002020;1.12e-29;34!UBERON:0002791;1.18e-27;32!UBERON:0001869;1.82e-27;32!UBERON:0002298;1.31e-23;6!UBERON:0002619;1.44e-23;22!UBERON:0001950;5.31e-22;20!UBERON:0000125;1.29e-20;9!UBERON:0002308;1.29e-20;9!UBERON:0000956;1.62e-20;25!UBERON:0000203;1.62e-20;25!UBERON:0007023;1.98e-18;114!UBERON:0004732;2.56e-18;13!UBERON:0001017;8.17e-18;75!UBERON:0001016;3.74e-17;83!UBERON:0000955;5.74e-17;68!UBERON:0004733;3.50e-15;12!UBERON:0002028;3.50e-15;12!UBERON:0002420;8.28e-15;9!UBERON:0007245;8.28e-15;9!UBERON:0010009;8.28e-15;9!UBERON:0010011;8.28e-15;9!UBERON:0000454;8.28e-15;9!UBERON:0009663;9.37e-14;7!UBERON:0002240;5.43e-13;3!UBERON:0005174;5.43e-13;3!UBERON:0001137;5.43e-13;3!UBERON:0001896;1.04e-12;3!UBERON:0005290;1.04e-12;3!UBERON:0000988;1.19e-12;3!UBERON:0003978;4.82e-12;3!UBERON:0000946;4.82e-12;3!UBERON:0000200;7.49e-10;6!UBERON:0002784;1.04e-09;4!UBERON:0005162;1.85e-09;2!UBERON:0000122;1.85e-09;2!UBERON:0001894;1.99e-09;7!UBERON:0001897;2.50e-09;2!UBERON:0010225;2.50e-09;2!UBERON:0002148;3.65e-09;2!UBERON:0006331;3.65e-09;2!UBERON:0009662;3.65e-09;2!UBERON:0001875;1.50e-08;2!UBERON:0002133;1.50e-08;2!UBERON:0006514;1.50e-08;2!UBERON:0010314;1.63e-07;132!UBERON:0011216;2.71e-07;132!UBERON:0000349;2.78e-07;5!UBERON:0001872;4.20e-07;5!UBERON:0002021;4.20e-07;5!UBERON:0002680;4.80e-07;9!UBERON:0001895;4.80e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,6.11e-70,56;UBERON:0005068,6.11e-70,56;UBERON:0006241,6.11e-70,56;UBERON:0007135,6.11e-70,56;UBERON:0000073,1.88e-60,53;UBERON:0002616,1.88e-60,53;UBERON:0003075,2.85e-58,82;UBERON:0007284,2.85e-58,82;UBERON:0007023,2.34e-55,114;UBERON:0002346,3.57e-55,86;UBERON:0001017,2.05e-48,81;UBERON:0000955,4.26e-48,68;UBERON:0006238,4.26e-48,68;UBERON:0010371,6.61e-47,104;UBERON:0002780,7.64e-46,41;UBERON:0001890,7.64e-46,41;UBERON:0003080,7.64e-46,41;UBERON:0006240,7.64e-46,41;UBERON:0001016,8.43e-46,89;UBERON:0010314,2.10e-41,132;UBERON:0003528,8.06e-38,34;UBERON:0002020,8.06e-38,34;UBERON:0001893,9.73e-38,34;UBERON:0002791,4.96e-32,32;UBERON:0003056,5.50e-32,61;UBERON:0001869,8.44e-32,32;UBERON:0004121,8.35e-28,171;UBERON:0000924,8.35e-28,171;UBERON:0006601,8.35e-28,171;UBERON:0003076,8.37e-25,15;UBERON:0003057,8.37e-25,15;UBERON:0000025,7.88e-24,192;UBERON:0002619,8.62e-24,22;UBERON:0002298,8.74e-24,6;UBERON:0001950,3.04e-22,20;UBERON:0000125,8.20e-21,9;UBERON:0002308,8.20e-21,9;UBERON:0000956,1.04e-20,25;UBERON:0000203,1.04e-20,25;UBERON:0004111,1.48e-19,240;UBERON:0004732,1.93e-18,13;UBERON:0011216,1.12e-16,223;UBERON:0004733,2.68e-15,12;UBERON:0002028,2.68e-15,12;UBERON:0007277,2.68e-15,12;UBERON:0002420,5.53e-15,9;UBERON:0007245,5.53e-15,9;UBERON:0010009,5.53e-15,9;UBERON:0010011,5.53e-15,9;UBERON:0000454,5.53e-15,9;UBERON:0009663,5.87e-14,7;UBERON:0000483,2.22e-13,306;UBERON:0000119,3.72e-13,309;UBERON:0002240,5.03e-13,3;UBERON:0005174,5.03e-13,3;UBERON:0001137,5.03e-13,3;UBERON:0001896,7.46e-13,3;UBERON:0005290,7.46e-13,3;UBERON:0010096,7.46e-13,3;UBERON:0000988,1.10e-12,3;UBERON:0003978,4.39e-12,3;UBERON:0009751,4.39e-12,3;UBERON:0000946,4.39e-12,3;UBERON:0002523,4.39e-12,3;UBERON:0005983,4.39e-12,3;UBERON:0002165,4.39e-12,3;UBERON:0002062,4.39e-12,3;UBERON:0007280,4.39e-12,3;UBERON:0000200,4.99e-10,6;UBERON:0002784,1.15e-09,4;UBERON:0005162,1.85e-09,2;UBERON:0000122,1.85e-09,2;UBERON:0001894,2.27e-09,7;UBERON:0006222,2.27e-09,7;UBERON:0001897,2.55e-09,2;UBERON:0010225,2.55e-09,2;UBERON:0002148,3.95e-09,2;UBERON:0006331,3.95e-09,2;UBERON:0009662,3.95e-09,2;UBERON:0001875,1.01e-08,2;UBERON:0006514,1.01e-08,2;UBERON:0002133,1.37e-08,2;UBERON:0001872,2.78e-07,5;UBERON:0000349,2.91e-07,5;UBERON:0002680,4.51e-07,9;UBERON:0001895,4.51e-07,9;UBERON:0010092,4.51e-07,9;UBERON:0002021,4.68e-07,5 | |||
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| ||
|short_description=p22@GAS7 | |||
}} | }} |
Latest revision as of 17:36, 18 September 2015
Short description: | p22@GAS7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_22_at_GAS7_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | 32bp_to_ENST00000396115, NM_201432, uc002gmj.1_5end |
EntrezGene: | GAS7 |
HGNC: | 4169 |
UniProt: | A8KAC2O60861 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data