FFCP PHASE1:Hg19::chr19:45822908..45822923,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1158 | |EntrezGene=1158 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=1994 | |HGNC=1994 | ||
|TSSclassifier=strong | |||
|UniProt=P06732 | |UniProt=P06732 | ||
|association_with_transcript=47bp_to_BT006793_5end | |association_with_transcript=47bp_to_BT006793_5end | ||
|cluster_id=chr19:45822908..45822923,- | |||
|coexpression_cluster_id=C31 | |||
|description=CAGE_peak_3_at_CKM_5end | |description=CAGE_peak_3_at_CKM_5end | ||
|id=chr19:45822908..45822923,- | |id=chr19:45822908..45822923,- | ||
|ontology_enrichment_celltype=CL:0000188!5.17e-08!9 | |ontology_enrichment_celltype=CL:0000188!5.17e-08!9 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0005062;7.64e-16;4!UBERON:0007284;7.64e-16;4!UBERON:0006603;2.28e-10;65!UBERON:0004874;1.63e-08;1!UBERON:0010227;1.88e-08;1!UBERON:0010226;2.02e-08;1!UBERON:0000358;2.33e-08;1!UBERON:0006298;3.21e-08;1!UBERON:0009143;4.72e-08;1!UBERON:0004140;5.62e-08;1!UBERON:0003104;1.82e-07;31 | |||
|ontology_enrichment_disease=DOID:114!1.06e-10!2 | |ontology_enrichment_disease=DOID:114!1.06e-10!2 | ||
|ontology_enrichment_disease_v019=DOID:114;8.41e-15;2!DOID:178;4.11e-08;1!DOID:326;4.11e-08;1!DOID:3978;4.11e-08;1!DOID:3394;4.11e-08;1!DOID:5844;4.11e-08;1!DOID:1287;7.70e-08;4 | |||
|ontology_enrichment_disease_v019_2=DOID:114,8.41e-15,2;DOID:178,4.11e-08,1;DOID:326,4.11e-08,1;DOID:3978,4.11e-08,1;DOID:3394,4.11e-08,1;DOID:5844,4.11e-08,1;DOID:1287,7.70e-08,4 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.23e-16!115;UBERON:0004151!2.94e-15!3;UBERON:0003978!6.32e-15!3;UBERON:0009751!6.32e-15!3;UBERON:0000946!6.32e-15!3;UBERON:0002523!6.32e-15!3;UBERON:0005983!6.32e-15!3;UBERON:0002165!6.32e-15!3;UBERON:0002062!6.32e-15!3;UBERON:0007280!6.32e-15!3;UBERON:0007100!6.85e-13!27;UBERON:0003103!2.75e-12!69;UBERON:0001630!2.98e-11!2;UBERON:0005090!2.98e-11!2;UBERON:0000341!4.65e-11!2;UBERON:0002081!1.17e-10!2;UBERON:0002133!1.80e-10!2;UBERON:0003127!2.18e-10!2;UBERON:0001829!2.51e-10!2;UBERON:0001723!1.01e-07!3;UBERON:0001033!1.01e-07!3;UBERON:0010056!1.01e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0004151;2.12e-21;3!UBERON:0003978;6.43e-21;3!UBERON:0000946;6.43e-21;3!UBERON:0007100;8.10e-21;25!UBERON:0005090;1.33e-15;2!UBERON:0001630;1.33e-15;2!UBERON:0000341;2.53e-15;2!UBERON:0002081;1.00e-14;2!UBERON:0002133;1.93e-14;2!UBERON:0000948;9.99e-11;22!UBERON:0001723;1.22e-10;3!UBERON:0001033;1.22e-10;3!UBERON:0001389;1.05e-08;1!UBERON:0000026;1.05e-08;1!UBERON:0008784;1.05e-08;1!UBERON:0006058;1.05e-08;1!UBERON:0003663;1.05e-08;1!UBERON:0004256;1.05e-08;1!UBERON:0004708;1.05e-08;1!UBERON:0002101;1.05e-08;1!UBERON:0004709;1.05e-08;1!UBERON:0002529;1.05e-08;1!UBERON:0010538;1.05e-08;1!UBERON:0003661;1.05e-08;1!UBERON:0010890;1.05e-08;1!UBERON:0002471;1.05e-08;1!UBERON:0001383;1.05e-08;1!UBERON:0010758;1.05e-08;1!UBERON:0010707;1.05e-08;1!UBERON:0000978;1.05e-08;1!UBERON:0002103;1.05e-08;1!UBERON:0001665;1.05e-08;1!UBERON:0003823;1.05e-08;1!UBERON:0000154;1.05e-08;1!UBERON:0010709;1.05e-08;1!UBERON:0002426;1.31e-08;1!UBERON:0003831;1.31e-08;1!UBERON:0003898;1.31e-08;1!UBERON:0004830;1.31e-08;1!UBERON:0003830;1.31e-08;1!UBERON:0005175;1.31e-08;1!UBERON:0001774;1.31e-08;1!UBERON:0001103;1.31e-08;1!UBERON:0000989;1.63e-08;1!UBERON:0008811;1.63e-08;1!UBERON:0007029;1.75e-08;1!UBERON:0002079;1.88e-08;1!UBERON:0002084;2.02e-08;1!UBERON:0002082;2.02e-08;1!UBERON:0001736;3.21e-08;1!UBERON:0002146;3.21e-08;1!UBERON:0005623;3.21e-08;1!UBERON:0002135;3.70e-08;1!UBERON:0001301;3.70e-08;1!UBERON:0002134;5.62e-08;1!UBERON:0005208;5.62e-08;1!UBERON:0004145;5.62e-08;1!UBERON:0005946;5.62e-08;1!UBERON:0005965;5.62e-08;1!UBERON:0002078;5.62e-08;1!UBERON:0001134;1.97e-07;16!UBERON:0002036;1.97e-07;16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004151,2.05e-21,3;UBERON:0003978,6.21e-21,3;UBERON:0009751,6.21e-21,3;UBERON:0000946,6.21e-21,3;UBERON:0002523,6.21e-21,3;UBERON:0005983,6.21e-21,3;UBERON:0002165,6.21e-21,3;UBERON:0002062,6.21e-21,3;UBERON:0007280,6.21e-21,3;UBERON:0007100,3.56e-19,27;UBERON:0007023,3.47e-16,114;UBERON:0005090,1.33e-15,2;UBERON:0001630,1.33e-15,2;UBERON:0000341,2.53e-15,2;UBERON:0002081,9.67e-15,2;UBERON:0010227,9.67e-15,2;UBERON:0003103,1.08e-14,68;UBERON:0002133,1.80e-14,2;UBERON:0001723,1.22e-10,3;UBERON:0001033,1.22e-10,3;UBERON:0010056,1.22e-10,3;UBERON:0000948,8.62e-10,24;UBERON:0005498,8.62e-10,24;UBERON:0004140,8.62e-10,24;UBERON:0009881,8.62e-10,24;UBERON:0004141,8.62e-10,24;UBERON:0003084,8.62e-10,24;UBERON:0007005,8.62e-10,24;UBERON:0004139,8.62e-10,24;UBERON:0004291,8.62e-10,24;UBERON:0004797,2.74e-09,7;UBERON:0005418,1.05e-08,1;UBERON:0001389,1.05e-08,1;UBERON:0000026,1.05e-08,1;UBERON:0008784,1.05e-08,1;UBERON:0006058,1.05e-08,1;UBERON:0003663,1.05e-08,1;UBERON:0004256,1.05e-08,1;UBERON:0004708,1.05e-08,1;UBERON:0002101,1.05e-08,1;UBERON:0004709,1.05e-08,1;UBERON:0002529,1.05e-08,1;UBERON:0010538,1.05e-08,1;UBERON:0003661,1.05e-08,1;UBERON:0010890,1.05e-08,1;UBERON:0002471,1.05e-08,1;UBERON:0001383,1.05e-08,1;UBERON:0004357,1.05e-08,1;UBERON:0004347,1.05e-08,1;UBERON:0005420,1.05e-08,1;UBERON:0005732,1.05e-08,1;UBERON:0010758,1.05e-08,1;UBERON:0010707,1.05e-08,1;UBERON:0000978,1.05e-08,1;UBERON:0002103,1.05e-08,1;UBERON:0001665,1.05e-08,1;UBERON:0003823,1.05e-08,1;UBERON:0000154,1.05e-08,1;UBERON:0010709,1.05e-08,1;UBERON:0005733,1.05e-08,1;UBERON:0005730,1.05e-08,1;UBERON:0002426,1.31e-08,1;UBERON:0003831,1.31e-08,1;UBERON:0003898,1.31e-08,1;UBERON:0004830,1.31e-08,1;UBERON:0003830,1.31e-08,1;UBERON:0005175,1.31e-08,1;UBERON:0001774,1.31e-08,1;UBERON:0001103,1.31e-08,1;UBERON:0010084,1.31e-08,1;UBERON:0000989,1.63e-08,1;UBERON:0008811,1.63e-08,1;UBERON:0006258,1.63e-08,1;UBERON:0005876,1.63e-08,1;UBERON:0004874,1.63e-08,1;UBERON:0007029,1.75e-08,1;UBERON:0002079,1.88e-08,1;UBERON:0002084,2.02e-08,1;UBERON:0002082,2.02e-08,1;UBERON:0010226,2.02e-08,1;UBERON:0001736,3.10e-08,1;UBERON:0006298,3.10e-08,1;UBERON:0002146,3.33e-08,1;UBERON:0005623,3.33e-08,1;UBERON:0002135,3.57e-08,1;UBERON:0001301,3.83e-08,1;UBERON:0002134,5.43e-08,1;UBERON:0005208,5.43e-08,1;UBERON:0005946,5.43e-08,1;UBERON:0005965,5.43e-08,1;UBERON:0002078,5.43e-08,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.37257369524342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183138929636687,0.165018999841176,0,0,0,0,0,0.460511024178389,0.137836572484531,0,0,0.0852266274161009,0.534192213880424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.61158997199083,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,97.9144729704522,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.29016005671309,0,0,0,0,3.29762656060626,0,1.58186518546373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.42349522926185,7.33313356837388,2.15361907373044,5.19165401297377,24.4658847437845,13.3902874465124,2.08268764708851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,35.020070992295,33.1045985182716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251567901752575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.548257766857182,52.1021737308759,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,135.960055809458,61.084370079467,107.862742114453,48.0853883128548,0,0.397901550322736,0,0,0,0,0,0,0,0,0,0,0,0.8453114551668,0,0,0,0,0,0,0,0,7.79839781787719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,175.918035068309,12.855479299042,0,0,0,0.636471582781649,3.23387502333151,127.799731015516,60.5752942920947,0.875576689189638,0.645499848534087,10.3124710529264,0,0,0,0,14.0784565442073,0,0,0,3.8242020782295,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.37257369524342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183138929636687,0.165018999841176,0,0,0,0,0,0.460511024178389,0.137836572484531,0,0,0.0852266274161009,0.534192213880424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.61158997199083,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,97.9144729704522,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.29016005671309,0,0,0,0,3.29762656060626,0,1.58186518546373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.42349522926185,7.33313356837388,2.15361907373044,5.19165401297377,24.4658847437845,13.3902874465124,2.08268764708851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,35.020070992295,33.1045985182716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251567901752575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.548257766857182,52.1021737308759,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,135.960055809458,61.084370079467,107.862742114453,48.0853883128548,0,0.397901550322736,0,0,0,0,0,0,0,0,0,0,0,0.8453114551668,0,0,0,0,0,0,0,0,7.79839781787719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,175.918035068309,12.855479299042,0,0,0,0.636471582781649,3.23387502333151,127.799731015516,60.5752942920947,0.875576689189638,0.645499848534087,10.3124710529264,0,0,0,0,14.0784565442073,0,0,0,3.8242020782295,0 | ||
|short_description=p3@CKM | |short_description=p3@CKM | ||
}} | }} |
Latest revision as of 16:47, 18 September 2015
Short description: | p3@CKM |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CKM_5end |
Coexpression cluster: | C31_skeletal_tongue_diaphragm_throat_penis_skin_trachea |
Association with transcript: | 47bp_to_BT006793_5end |
EntrezGene: | CKM |
HGNC: | 1994 |
UniProt: | P06732 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
heart disease | 8.41e-15 | 2 |
vascular disease | 4.11e-08 | 1 |
ischemia | 4.11e-08 | 1 |
extrinsic cardiomyopathy | 4.11e-08 | 1 |
myocardial ischemia | 4.11e-08 | 1 |
myocardial infarction | 4.11e-08 | 1 |
cardiovascular system disease | 7.70e-08 | 4 |