FFCP PHASE1:Hg19::chr10:61666799..61666816,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8030 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18782 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=1bp_to_uc001jks.3_5end | |||
|cluster_id=chr10:61666799..61666816,- | |||
|description=CAGE_peak_7_at_CCDC6_5end | |||
|id=chr10:61666799..61666816,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002537;2.67e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002537,2.43e-07,5 | |||
|ontology_enrichment_development_v019=UBERON:0010122;2.06e-17;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002780!1.50e-16!41;UBERON:0001890!1.50e-16!41;UBERON:0006240!1.50e-16!41;UBERON:0001049!4.58e-16!57;UBERON:0005068!4.58e-16!57;UBERON:0006241!4.58e-16!57;UBERON:0007135!4.58e-16!57;UBERON:0003080!8.22e-16!42;UBERON:0007023!1.60e-15!115;UBERON:0002020!3.73e-15!34;UBERON:0003528!3.73e-15!34;UBERON:0001893!7.82e-15!34;UBERON:0001869!1.62e-14!32;UBERON:0002791!3.84e-14!33;UBERON:0002616!4.01e-13!59;UBERON:0002346!8.71e-12!90;UBERON:0000955!1.81e-11!69;UBERON:0006238!1.81e-11!69;UBERON:0001017!1.96e-11!82;UBERON:0003075!5.15e-11!86;UBERON:0007284!5.15e-11!86;UBERON:0003056!5.46e-11!61;UBERON:0005743!8.85e-11!86;UBERON:0001950!3.07e-10!20;UBERON:0002619!3.42e-10!22;UBERON:0000956!1.35e-09!25;UBERON:0000203!1.35e-09!25;UBERON:0000073!1.12e-08!94;UBERON:0001016!1.12e-08!94;UBERON:0002420!2.47e-08!9;UBERON:0007245!2.47e-08!9;UBERON:0010009!2.47e-08!9;UBERON:0010011!2.47e-08!9;UBERON:0000454!2.47e-08!9;UBERON:0002308!1.76e-07!9;UBERON:0000125!1.76e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0002420;4.01e-43;9!UBERON:0007245;4.01e-43;9!UBERON:0010009;4.01e-43;9!UBERON:0010011;4.01e-43;9!UBERON:0000454;4.01e-43;9!UBERON:0000369;6.20e-33;4!UBERON:0002435;6.20e-33;4!UBERON:0000204;6.20e-33;4!UBERON:0002791;9.75e-31;32!UBERON:0001869;1.37e-29;32!UBERON:0009663;6.42e-29;7!UBERON:0003528;4.66e-28;34!UBERON:0002020;4.66e-28;34!UBERON:0001893;7.11e-26;34!UBERON:0000349;1.10e-25;5!UBERON:0005383;2.17e-25;3!UBERON:0005382;2.17e-25;3!UBERON:0000125;1.75e-22;9!UBERON:0002308;1.75e-22;9!UBERON:0002780;2.68e-20;41!UBERON:0001890;2.68e-20;41!UBERON:0001873;2.06e-17;2!UBERON:0001876;6.44e-17;2!UBERON:0002619;2.60e-16;22!UBERON:0000956;2.42e-14;25!UBERON:0000203;2.42e-14;25!UBERON:0000073;8.08e-14;53!UBERON:0002616;8.08e-14;53!UBERON:0001950;2.60e-13;20!UBERON:0001874;9.41e-10;1!UBERON:0001882;2.54e-09;1!UBERON:0002022;2.54e-09;1!UBERON:0006834;2.54e-09;1!UBERON:0007195;2.54e-09;1!UBERON:0005403;2.54e-09;1!UBERON:0001017;1.95e-08;75!UBERON:0000955;6.85e-08;68!UBERON:0001872;1.82e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002420,3.25e-44,9;UBERON:0007245,3.25e-44,9;UBERON:0010009,3.25e-44,9;UBERON:0010011,3.25e-44,9;UBERON:0000454,3.25e-44,9;UBERON:0000369,1.69e-33,4;UBERON:0002435,1.69e-33,4;UBERON:0000204,1.69e-33,4;UBERON:0010082,1.69e-33,4;UBERON:0002791,3.02e-33,32;UBERON:0001869,3.02e-33,32;UBERON:0003528,3.12e-31,34;UBERON:0002020,3.12e-31,34;UBERON:0001893,3.12e-31,34;UBERON:0009663,1.61e-29,7;UBERON:0000349,1.94e-26,5;UBERON:0002780,1.09e-25,41;UBERON:0001890,1.09e-25,41;UBERON:0003080,1.09e-25,41;UBERON:0006240,1.09e-25,41;UBERON:0005383,1.23e-25,3;UBERON:0005382,1.23e-25,3;UBERON:0000125,6.02e-23,9;UBERON:0002308,6.02e-23,9;UBERON:0003056,9.46e-20,61;UBERON:0000073,1.59e-19,53;UBERON:0002616,1.59e-19,53;UBERON:0001049,2.18e-18,56;UBERON:0005068,2.18e-18,56;UBERON:0006241,2.18e-18,56;UBERON:0007135,2.18e-18,56;UBERON:0001873,1.16e-17,2;UBERON:0010122,1.16e-17,2;UBERON:0001876,1.76e-17,2;UBERON:0002619,2.81e-16,22;UBERON:0000955,1.38e-14,68;UBERON:0006238,1.38e-14,68;UBERON:0000956,2.58e-14,25;UBERON:0000203,2.58e-14,25;UBERON:0003075,3.59e-14,82;UBERON:0007284,3.59e-14,82;UBERON:0002346,2.05e-13,86;UBERON:0001950,2.91e-13,20;UBERON:0001017,5.63e-12,81;UBERON:0010371,1.02e-10,104;UBERON:0001016,1.34e-10,89;UBERON:0001874,9.44e-10,1;UBERON:0001882,1.21e-09,1;UBERON:0005403,1.21e-09,1;UBERON:0010314,1.98e-09,132;UBERON:0007195,3.53e-09,1;UBERON:0006834,4.15e-09,1;UBERON:0002022,5.72e-09,1;UBERON:0007023,4.32e-08,114;UBERON:0004121,9.88e-08,171;UBERON:0000924,9.88e-08,171;UBERON:0006601,9.88e-08,171;UBERON:0001872,2.36e-07,5 | |||
|phase1_expression=0,0.428201047781966,0.986680828671798,0,0,0.872338524100369,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0.492484232307152,0,0,0,0.136874425072884,0.125542639594803,0.229240217243854,0.328402357799783,0.236132343941038,0,0.383829398097213,0,0,0,0,0.46480320348181,0,0.293600439334847,1.10799081706375,0,0,0,0,0.257575567634187,0,0,0,0,0,0.309706370895104,0.28769239232215,0,0,0,0,0,0.188242339542605,0,0,0,0,0.639337125799041,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112328631146495,0,0.16072558669708,0,0,0,0,0.546138611262131,0,0,0,0,0,0,0,0,0.764546456250458,0,0,0.526768169550154,0,0.393010762749165,0.822405995998037,0.334372990781356,0.651844533267181,0.946895611469467,0,0.111410456885174,0,0.221533894583621,0.541607727530031,0.128091319725675,0.130059347559878,0.164437904603676,0,0.289803085735052,1.03800594213442,1.07016331235885,0,0.226618685395132,0,0,0.253019692019503,0,0,0.950452044448374,0.602300476311091,0.255973222308837,1.24930726552346,0.473554504088034,0,0.201606743224732,0,0.289648807765598,2.43806866313962,0,0.12786256184353,0,0,0,0,0,0.378139268656271,0.221729397462564,0.175669571386252,0.130979075497713,0,0,0.649094787309367,0.522389211897802,0.132957960518865,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0.33472061276467,0,0,0,0,0,0,0.22452937262617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.269421344139376,0,0,0,0.234321431833797,0,0,0,0,0,0,0,0.122834317311768,0.103325781175765,0,0,0,0,0,0.250237039743928,0,0,0,0,0,0,0,0,0,0.206105058476878,0,0,0,0,0.252433774244115,0.184099797284599,0,0,0.201504196455281,0.169560592310488,0,0,0,0.121973706129595,0,0,0.207322110030741,0,0,0,0,0,0,0,0.118306800039844,0.168584690078102,0,0.110293972732394,0,0.237270619111097,0,0,0,0,0,0,0,0,0,0,0,0.737930631258681,0,0,0,0,0,0,0,0,0.231860809950154,0,0.144366447761074,0,0.190254152234598,0,0,0,0,0,0,0,0.141775097242386,0,0,0.383382679165211,0,0,0.414656231081544,0.144119953416961,0.50496973370552,0.063497894292169,0.381988425558278,0,0,0,0.300343057843917,0,0,0,0,0.258543431515556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299918973546171,0,0,0,0,0,0,0,0,0.179060963239896,0,0.394061520403854,0.215627574859517,0,0,0,0,0.335032530668698,0,0,0,0,0.12269149171914,0,0,0,0.178428988797162,0.157702415033935,0,0,0,0,0,0,0.0868836144680828,0,0,0.413536052245775,0.431428401637234,0.106727557803444,0,0,0,0,0,0,0,1.53512174720011,0,0,0,0,0,0,0.116210378459959,0.846016147141356,0,0.184161977871793,0.114814448164607,0,0.131124414959424,0,0.0770153371044148,0,0,0.105551628892876,1.13733384070897,0,0,0,0.270946437543853,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0.290012154876366,0.154048617114644,0.614014698904518,0,0.214840489736547,0,0.170453254832202,0.267096106940212,0,0.384380134730212,0,0.10115778085555,0.464845549297286,0.31481234683064,0,0,0,0,0,0.286249773483982,0,0,0,0,0.42793898803392,0,0,0,0,0.353437207037059,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0.438450885253763,0,0,0,0,0,0.286822704408103,0,0,0,0.211107635297664,0.329294892959902,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0.106824071127473,0,0,0,0.144269212976445,0,0.159426272728822,0.199579371432817,0.5745161103971,0.211673582723883,0.324621940274555,0,0.228234679033192,0,0,0.338583555603207,0.1605880751037,0,0,0.343505344755765,0.307240764308458,0.223676107892416,0.333698283423817,0.19538809540204,0,0,0.270455678475983,0,0,0.18714054040822,0,0,0,0.284136146806413,0.23874448473769,1.18785872333055,1.22864280839693,1.9882952955326,1.54736358051564,0.111308705022906,0,0,0.19924798825107,0,0,0.306806047506464,0.123084805461069,0.311039587661807,0,0.179021174675609,0,0.591860433821602,0,1.11136990144637,0,0.649376687132959,0,0.260427761085233,0.787139999965761,0,0.341380344856499,0.254253650292766,0.236387681767936,0,0,0,1.77148277162768,5.78862905401958,0,0.331737779793674,0,0.87754158861589,0.10893846351899,0,0.384751292518985,0.113942055847001,0.23056390438806,0.179515288819544,0.325942115766024,0.638002319463839,0.0915975934018623,0,0,0.31396051279005,0,0.451191321234361,0,0.167821586975843,0.37950746544837,0,0,0.652931232636591,0.989471500037586,0,0,0.265372693510018,0.611030144933625,0,0.370691816839509,0.417687798021821,0.067401132980677,0,0.702793337176017,0,0.19566461893209,0,0,0,0.61214552326098,0.126373159256976,0.901940516486955,0.103688191397247,0,0,0,0,0,0,0.173559738335131,0,0.435296032902013,0.17472666824203,0,0,0,0,0.678923115418936,0.353024506766001,0,0,0,0.50648636764703,0.391102765469606,0,0.213452994739353,0,0.576361668616424,0.114536596165916,0,0,0,0.471388069233591,0,0,0.101998217636322,0,1.80126086612937,0.273810757783986,0,0,0,0,0.229160424011684,0,0.199679000498991,0,0,0.268733889946905,0,1.16495949527454,0.0787831823072236,0,0.0674035438541849,0,0,0,1.22583065500418,0.160753148465019,0.275078873194468,0,0,0,1.03274246318642,0,0.315222829196793,0.367182116944987,0,0.179287339332845,0.191915197319445,0,0,0.25426853765475,0,0,0,1.19730191562487,0.082092520749339,0,0,0,0,0.258565912723101,0.52893040697076,0,0,0.213574825135389,0.314408610199332,0.414239055347196,0,0,0.365377795142688,0,0,0.2506898940227,0,0,0,0.886068179966986,0.732157589411779,0.876336514945499,0,0.443716206147409,0.248385611765534,0.415045904808692,0,0,0,0,0,0,0,0,0,0.189403005275089,0.251567901752575,0,0,0,0,0,0,0.449803112163605,0,0,0,0,0.150257608997218,0,0.406870733204662,0,0,0,0,0,0,0,0,0.192619830407303,0,0,0,0,0.489473409012935,0.358177682162975,0,0,0.353378291891762,0,0,0.256241518587947,0,0,0.276516872303462,0.779441235357554,0.531459361253452,0,0,0.245772908753719,0.211312123358627,0,0.106691729694141,0,0,0.184105950251841,0,0,0.255788742607303,0,0,0,0,0.212574920101683,0.371807292777007,0,0,0.157723490002507,0,0,0,1.86264752779733,0,1.11743701340006,0.615349092722265,0.504143392443436,0.484100767249525,0.484426936895553,0,0,0,0,0,0,0,0.397832444232549,0.601682626794058,0.20170506870352,0,0.261906694481422,0,0.147856086217045,0.742913430802341,0,1.03343398250592,0.443910671357348,2.7348740450911,0,0.496211178389294,0.879356221798103,0.127762427639595,0.535701835878287,0,0.606965604236632,0.455324382702595,0.266107110487916,0.115233987555779,0,0.40781839786099,0.131545547125698,0,0.222462803784138,0.313972371402056,2.51384943865603,0.280272163313789,0,0.215927591218621,0,0.357382720883282,0,0.116241425368125,0,0,0,0,0,0.430227358820278,0,0,0,0,0.31020638566432,0,0.111855431797792,0,0.121917924982269,0,0.102662806856247,0,0,0,0,0,0,0,0,0.463044948647668,0.218559560503957,0,0.245148321753905,0,0.196308467114945,0.594092800654172,0,0.169927114687817,0.0939839179798536,0.257831551894309,0.0999411559249289,0,0.352894871715692,0.0802413666891683,0,0.917458566809082,0.286679166302903,0,0.271965960763659,0,0,0,0.462175628631418,0.432626562123789,0,0.109265571963696,0,0,0.26721740526556,0,0,0.303114792872958,0.267964130156178,0,0.930896962757057,0.213233981900981,0.476128862927481,0.193766729508018,0.31037357147929,0,0.700118741059814,0.202117188958219,0,0,0.134704106029175,0.358611026963382,0,0,0.106727345877715,0,0.449126010532934,0,1.1001729976458,0.813792356631477,0,0.201273793591026,0 | |||
|short_description=p7@CCDC6 | |||
}} |
Latest revision as of 16:07, 18 September 2015
Short description: | p7@CCDC6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_CCDC6_5end |
Coexpression cluster: | NA |
Association with transcript: | 1bp_to_uc001jks.3_5end |
EntrezGene: | CCDC6 |
HGNC: | 18782 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
amnion mesenchymal stem cell | 2.43e-07 | 5 |