FFCP PHASE1:Hg19::chr10:60936921..60936943,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84457 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29378 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-74bp_to_ENST00000373878_5end | |||
|cluster_id=chr10:60936921..60936943,+ | |||
|coexpression_cluster_id=C162 | |||
|description=CAGE_peak_4_at_PHYHIPL_5end | |||
|id=chr10:60936921..60936943,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000182;7.59e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,7.77e-07,12 | |||
|ontology_enrichment_development_v019=UBERON:0006241;3.45e-16;3!UBERON:0003057;3.45e-16;3!UBERON:0006215;4.68e-16;3!UBERON:0006601;2.51e-15;82!UBERON:0004161;1.82e-07;11 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!8.84e-91!57;UBERON:0005068!8.84e-91!57;UBERON:0006241!8.84e-91!57;UBERON:0007135!8.84e-91!57;UBERON:0001017!5.33e-80!82;UBERON:0005743!8.99e-79!86;UBERON:0000073!5.90e-76!94;UBERON:0001016!5.90e-76!94;UBERON:0002616!8.85e-75!59;UBERON:0000955!5.60e-71!69;UBERON:0006238!5.60e-71!69;UBERON:0002020!1.06e-66!34;UBERON:0003528!1.06e-66!34;UBERON:0001893!3.48e-66!34;UBERON:0002780!4.01e-66!41;UBERON:0001890!4.01e-66!41;UBERON:0006240!4.01e-66!41;UBERON:0003080!2.35e-64!42;UBERON:0002791!5.96e-64!33;UBERON:0003075!8.30e-62!86;UBERON:0007284!8.30e-62!86;UBERON:0001869!4.83e-61!32;UBERON:0002346!1.64e-58!90;UBERON:0007023!2.37e-47!115;UBERON:0002619!2.70e-46!22;UBERON:0001950!3.99e-46!20;UBERON:0003056!2.92e-44!61;UBERON:0000956!2.97e-44!25;UBERON:0000203!2.97e-44!25;UBERON:0000033!2.19e-40!123;UBERON:0004121!3.38e-38!169;UBERON:0000153!6.20e-38!129;UBERON:0007811!6.20e-38!129;UBERON:0000924!5.34e-37!173;UBERON:0006601!5.34e-37!173;UBERON:0003076!3.24e-26!15;UBERON:0003057!3.24e-26!15;UBERON:0002308!5.42e-24!9;UBERON:0000125!5.42e-24!9;UBERON:0002420!2.38e-23!9;UBERON:0007245!2.38e-23!9;UBERON:0010009!2.38e-23!9;UBERON:0010011!2.38e-23!9;UBERON:0000454!2.38e-23!9;UBERON:0000025!4.22e-23!194;UBERON:0004732!6.67e-21!13;UBERON:0009663!1.16e-18!7;UBERON:0004733!1.34e-18!12;UBERON:0002028!1.34e-18!12;UBERON:0007277!1.34e-18!12;UBERON:0002298!2.63e-17!8;UBERON:0004111!5.31e-17!241;UBERON:0000200!2.92e-15!6;UBERON:0001871!3.17e-15!7;UBERON:0002021!9.01e-14!5;UBERON:0001872!1.15e-13!5;UBERON:0000483!1.94e-13!309;UBERON:0000119!3.51e-13!312;UBERON:0000477!3.88e-13!286;UBERON:0000475!1.33e-12!365;UBERON:0000064!1.06e-11!219;UBERON:0002680!2.68e-11!9;UBERON:0001895!2.68e-11!9;UBERON:0010092!2.68e-11!9;UBERON:0000369!4.50e-11!4;UBERON:0002435!4.50e-11!4;UBERON:0000204!4.50e-11!4;UBERON:0010082!4.50e-11!4;UBERON:0001896!8.10e-10!3;UBERON:0005290!8.10e-10!3;UBERON:0010096!8.10e-10!3;UBERON:0002240!8.83e-10!3;UBERON:0006331!1.69e-09!3;UBERON:0000988!2.12e-09!3;UBERON:0000349!6.00e-09!5;UBERON:0005383!8.76e-09!3;UBERON:0005382!8.76e-09!3;UBERON:0002771!2.39e-08!3;UBERON:0000062!5.59e-08!511;UBERON:0000922!1.67e-07!612;UBERON:0002148!5.01e-07!2;UBERON:0009662!5.01e-07!2;UBERON:0000467!5.21e-07!625;UBERON:0000480!5.68e-07!626;UBERON:0001875!7.90e-07!2;UBERON:0006514!7.90e-07!2;UBERON:0000923!9.67e-07!604;UBERON:0005291!9.67e-07!604;UBERON:0006598!9.67e-07!604;UBERON:0002532!9.67e-07!604 | |||
|ontology_enrichment_uberon_v019=UBERON:0004732;4.52e-37;13!UBERON:0000073;6.42e-36;53!UBERON:0002616;6.42e-36;53!UBERON:0004733;6.19e-33;12!UBERON:0002028;6.19e-33;12!UBERON:0003528;1.78e-30;34!UBERON:0002020;1.78e-30;34!UBERON:0002298;4.01e-30;6!UBERON:0002780;6.38e-30;41!UBERON:0001890;6.38e-30;41!UBERON:0002791;2.38e-27;32!UBERON:0001893;1.26e-26;34!UBERON:0001016;4.59e-25;83!UBERON:0001869;2.93e-24;32!UBERON:0001017;1.68e-23;75!UBERON:0002619;3.77e-23;22!UBERON:0000955;2.17e-21;68!UBERON:0001950;4.93e-21;20!UBERON:0000956;3.12e-20;25!UBERON:0000203;3.12e-20;25!UBERON:0002680;9.98e-20;9!UBERON:0001895;9.98e-20;9!UBERON:0000125;1.66e-19;9!UBERON:0002308;1.66e-19;9!UBERON:0001896;2.54e-16;3!UBERON:0005290;2.54e-16;3!UBERON:0002240;3.45e-16;3!UBERON:0005174;3.45e-16;3!UBERON:0001137;3.45e-16;3!UBERON:0000988;1.37e-15;3!UBERON:0007023;1.70e-14;114!UBERON:0002420;1.99e-13;9!UBERON:0007245;1.99e-13;9!UBERON:0010009;1.99e-13;9!UBERON:0010011;1.99e-13;9!UBERON:0000454;1.99e-13;9!UBERON:0009663;1.68e-11;7!UBERON:0002148;2.79e-11;2!UBERON:0006331;2.79e-11;2!UBERON:0009662;2.79e-11;2!UBERON:0001875;4.99e-11;2!UBERON:0006514;4.99e-11;2!UBERON:0001897;8.22e-11;2!UBERON:0010225;8.22e-11;2!UBERON:0005162;9.78e-11;2!UBERON:0000122;9.78e-11;2!UBERON:0002021;1.44e-09;5!UBERON:0001872;3.12e-09;5!UBERON:0011216;7.64e-09;132!UBERON:0002037;2.96e-08;6!UBERON:0001870;3.45e-07;3!UBERON:0001894;5.26e-07;7!UBERON:0010314;5.26e-07;132 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,4.39e-77,56;UBERON:0005068,4.39e-77,56;UBERON:0006241,4.39e-77,56;UBERON:0007135,4.39e-77,56;UBERON:0000073,1.53e-65,53;UBERON:0002616,1.53e-65,53;UBERON:0001017,5.03e-62,81;UBERON:0001016,8.17e-59,89;UBERON:0003075,2.00e-54,82;UBERON:0007284,2.00e-54,82;UBERON:0000955,4.95e-53,68;UBERON:0006238,4.95e-53,68;UBERON:0002346,1.29e-51,86;UBERON:0003076,1.42e-46,15;UBERON:0003057,1.42e-46,15;UBERON:0010371,1.30e-41,104;UBERON:0007023,1.51e-37,114;UBERON:0002780,1.72e-37,41;UBERON:0001890,1.72e-37,41;UBERON:0003080,1.72e-37,41;UBERON:0006240,1.72e-37,41;UBERON:0004732,5.39e-37,13;UBERON:0003528,2.41e-36,34;UBERON:0002020,2.41e-36,34;UBERON:0010314,1.10e-33,132;UBERON:0004733,7.62e-33,12;UBERON:0002028,7.62e-33,12;UBERON:0007277,7.62e-33,12;UBERON:0001893,7.40e-32,34;UBERON:0002298,5.04e-30,6;UBERON:0002791,1.19e-29,32;UBERON:0011216,2.41e-29,223;UBERON:0004121,9.09e-28,171;UBERON:0000924,9.09e-28,171;UBERON:0006601,9.09e-28,171;UBERON:0003056,9.15e-27,61;UBERON:0001869,1.01e-25,32;UBERON:0000025,1.68e-24,192;UBERON:0002619,3.95e-23,22;UBERON:0001950,5.00e-21,20;UBERON:0000956,3.25e-20,25;UBERON:0000203,3.25e-20,25;UBERON:0002680,1.12e-19,9;UBERON:0001895,1.12e-19,9;UBERON:0010092,1.12e-19,9;UBERON:0000125,1.46e-19,9;UBERON:0002308,1.46e-19,9;UBERON:0004111,3.44e-18,240;UBERON:0001896,2.82e-16,3;UBERON:0005290,2.82e-16,3;UBERON:0010096,2.82e-16,3;UBERON:0002240,3.28e-16,3;UBERON:0005174,3.28e-16,3;UBERON:0001137,3.28e-16,3;UBERON:0000988,1.56e-15,3;UBERON:0000483,9.19e-14,306;UBERON:0000119,1.47e-13,309;UBERON:0002420,1.55e-13,9;UBERON:0007245,1.55e-13,9;UBERON:0010009,1.55e-13,9;UBERON:0010011,1.55e-13,9;UBERON:0000454,1.55e-13,9;UBERON:0009663,1.57e-11,7;UBERON:0002148,2.59e-11,2;UBERON:0006331,2.59e-11,2;UBERON:0009662,2.59e-11,2;UBERON:0001875,5.81e-11,2;UBERON:0006514,5.81e-11,2;UBERON:0001897,9.55e-11,2;UBERON:0005162,9.55e-11,2;UBERON:0000122,9.55e-11,2;UBERON:0010225,9.55e-11,2;UBERON:0002021,1.62e-09,5;UBERON:0001872,2.74e-09,5;UBERON:0002037,3.03e-08,6;UBERON:0006215,3.03e-08,6;UBERON:0000923,3.53e-07,560;UBERON:0010316,3.53e-07,560;UBERON:0005291,3.53e-07,560;UBERON:0006598,3.53e-07,560;UBERON:0010317,3.53e-07,560;UBERON:0002532,3.53e-07,560;UBERON:0001870,3.68e-07,3;UBERON:0002050,4.52e-07,564;UBERON:0001894,5.60e-07,7;UBERON:0006222,5.60e-07,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458426764241994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.614942192715568,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30139853857622,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9882952955326,0.703347082052564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.90799823828566,0.74214478529481,0,0,0,0,0,0,0,0,0,0,3.54296554325536,0.723578631752448,3.05163472634166,3.53853631779919,6.50204761697804,1.97446857438575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123563938946503,0.104421949505455,3.30265551605317,0,6.32514003458416,0,0,0,0,0,0.61214552326098,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,1.01297273529406,0,0,0,0,0,0,0.857974989309823,0,0,0,0,0,0,0,8.40588404193705,1.23214841002794,0,0,0,0,0,0,0,0,0,0,0,1.16495949527454,4.72699093843342,3.79112948553366,4.65084452593876,0,0,0,2.45166131000836,0,0.137539436597234,0,0,0,0.242998226632099,0,0.236417121897595,0.157363764404994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.17908990167009,2.77688463659649,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157054096250234,1.77213635993397,0.854183854313742,0.751145584238999,6.30750115259078,4.6590201645478,4.22255540001407,0.138348634936231,0,0,0,0,0.936669811613763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553033744606923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109209638192014,0,0,0,0,0,0,0,0,0,0.899209151350433,1.41696576325585,0.957803154342908,5.74325819874114,3.02486035466062,0.207471757392654,1.45328081068666,1.42769420259154,0,0,0,0,0,0,0,0,0,0,0,0,0,0.540300676947157,1.56215619722769,0.620060389503552,1.26831620387814,3.82882366312754,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,1.22345519358297,0.920818829879887,0,0,0,0.785577949580009,0,0,0,0,0.214429632529969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,20.4160805799543,2.67341760294377,5.9171801861676,0,0,0,0,0,0,0,0,0,1.72007499781742,0,1.08786384305464,3.05445483238264,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,2.48750831837634,2.37895890482359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p4@PHYHIPL | |||
}} |
Latest revision as of 15:12, 18 September 2015
Short description: | p4@PHYHIPL |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_PHYHIPL_5end |
Coexpression cluster: | C162_spinal_locus_medulla_substantia_thalamus_globus_diencephalon |
Association with transcript: | -74bp_to_ENST00000373878_5end |
EntrezGene: | PHYHIPL |
HGNC: | 29378 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 7.77e-07 | 12 |