FFCP PHASE1:Hg19::chr12:49297899..49297955,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr12:49297899..49297955,+ to FFCP PHASE1:Hg19::chr12:49297899..49297955,+: NSchange) |
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(10 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=85478 | |EntrezGene=85478 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29937 | |HGNC=29937 | ||
|TSSclassifier=strong | |||
|UniProt=Q8IXS2,F8W0R6,F8VR42 | |UniProt=Q8IXS2,F8W0R6,F8VR42 | ||
|association_with_transcript=0bp_to_ENST00000320516,ENST00000547861,ENST00000552942_5end | |||
|cluster_id=chr12:49297899..49297955,+ | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_1_at_CCDC65_5end | |||
|id=chr12:49297899..49297955,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.62e-08;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!4.00e-21!57;UBERON:0005068!4.00e-21!57;UBERON:0006241!4.00e-21!57;UBERON:0007135!4.00e-21!57;UBERON:0000073!1.03e-20!94;UBERON:0001016!1.03e-20!94;UBERON:0005743!9.92e-20!86;UBERON:0001017!3.50e-19!82;UBERON:0002780!5.78e-19!41;UBERON:0001890!5.78e-19!41;UBERON:0006240!5.78e-19!41;UBERON:0003080!4.53e-18!42;UBERON:0002616!8.87e-18!59;UBERON:0000955!1.00e-17!69;UBERON:0006238!1.00e-17!69;UBERON:0003075!4.44e-16!86;UBERON:0007284!4.44e-16!86;UBERON:0001893!6.81e-16!34;UBERON:0002020!7.44e-16!34;UBERON:0003528!7.44e-16!34;UBERON:0002346!9.92e-16!90;UBERON:0002791!3.22e-15!33;UBERON:0001869!4.12e-15!32;UBERON:0007023!1.20e-13!115;UBERON:0003056!2.09e-13!61;UBERON:0004121!6.24e-13!169;UBERON:0000924!6.99e-13!173;UBERON:0006601!6.99e-13!173;UBERON:0000153!1.32e-11!129;UBERON:0007811!1.32e-11!129;UBERON:0000033!2.30e-11!123;UBERON:0000956!5.86e-11!25;UBERON:0000203!5.86e-11!25;UBERON:0002619!9.64e-11!22;UBERON:0000475!1.24e-10!365;UBERON:0001950!1.23e-09!20;UBERON:0000025!4.50e-09!194;UBERON:0000119!4.50e-08!312;UBERON:0004111!8.27e-08!241;UBERON:0000483!1.38e-07!309;UBERON:0000477!4.61e-07!286 | |||
|ontology_enrichment_uberon_v019=UBERON:0000073;1.18e-20;53!UBERON:0002616;1.18e-20;53!UBERON:0002780;1.20e-20;41!UBERON:0001890;1.20e-20;41!UBERON:0003528;1.58e-18;34!UBERON:0002020;1.58e-18;34!UBERON:0001893;1.18e-17;34!UBERON:0001869;7.20e-17;32!UBERON:0002791;1.60e-15;32!UBERON:0002619;2.59e-15;22!UBERON:0002298;1.05e-14;6!UBERON:0001950;1.75e-14;20!UBERON:0000955;2.54e-14;68!UBERON:0001017;4.90e-14;75!UBERON:0000956;3.74e-13;25!UBERON:0000203;3.74e-13;25!UBERON:0001894;9.57e-12;7!UBERON:0001016;3.73e-11;83!UBERON:0007023;8.09e-11;114!UBERON:0000369;2.45e-10;4!UBERON:0002435;2.45e-10;4!UBERON:0000204;2.45e-10;4!UBERON:0000125;1.87e-09;9!UBERON:0002308;1.87e-09;9!UBERON:0000200;5.56e-09;6!UBERON:0001896;1.13e-08;3!UBERON:0005290;1.13e-08;3!UBERON:0004732;2.70e-08;13!UBERON:0005383;4.00e-08;3!UBERON:0005382;4.00e-08;3!UBERON:0000988;1.00e-07;3!UBERON:0001871;1.94e-07;6!UBERON:0004733;6.51e-07;12!UBERON:0002028;6.51e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,8.33e-36,56;UBERON:0005068,8.33e-36,56;UBERON:0006241,8.33e-36,56;UBERON:0007135,8.33e-36,56;UBERON:0000073,1.06e-35,53;UBERON:0002616,1.06e-35,53;UBERON:0007023,1.75e-32,114;UBERON:0001017,3.78e-32,81;UBERON:0000955,2.77e-31,68;UBERON:0006238,2.77e-31,68;UBERON:0002780,3.80e-30,41;UBERON:0001890,3.80e-30,41;UBERON:0003080,3.80e-30,41;UBERON:0006240,3.80e-30,41;UBERON:0001016,1.42e-29,89;UBERON:0003075,1.77e-26,82;UBERON:0007284,1.77e-26,82;UBERON:0002346,8.74e-25,86;UBERON:0003056,1.95e-21,61;UBERON:0001893,6.20e-21,34;UBERON:0003528,7.43e-21,34;UBERON:0002020,7.43e-21,34;UBERON:0010371,5.01e-20,104;UBERON:0001869,5.84e-20,32;UBERON:0002791,1.24e-17,32;UBERON:0010314,6.55e-16,132;UBERON:0002619,1.35e-15,22;UBERON:0001950,8.67e-15,20;UBERON:0002298,1.10e-14,6;UBERON:0000956,2.13e-13,25;UBERON:0000203,2.13e-13,25;UBERON:0011216,2.29e-13,223;UBERON:0004121,5.79e-13,171;UBERON:0000924,5.79e-13,171;UBERON:0006601,5.79e-13,171;UBERON:0001894,7.60e-12,7;UBERON:0006222,7.60e-12,7;UBERON:0000025,1.28e-11,192;UBERON:0000369,3.21e-10,4;UBERON:0002435,3.21e-10,4;UBERON:0000204,3.21e-10,4;UBERON:0010082,3.21e-10,4;UBERON:0000125,2.36e-09,9;UBERON:0002308,2.36e-09,9;UBERON:0000200,4.90e-09,6;UBERON:0001896,1.13e-08,3;UBERON:0005290,1.13e-08,3;UBERON:0010096,1.13e-08,3;UBERON:0004111,2.52e-08,240;UBERON:0004732,2.78e-08,13;UBERON:0005383,5.43e-08,3;UBERON:0005382,5.43e-08,3;UBERON:0000988,1.04e-07,3;UBERON:0000483,1.75e-07,306;UBERON:0001871,1.83e-07,6;UBERON:0000119,2.70e-07,309;UBERON:0003076,3.55e-07,15;UBERON:0003057,3.55e-07,15;UBERON:0004733,6.62e-07,12;UBERON:0002028,6.62e-07,12;UBERON:0007277,6.62e-07,12 | |||
|phase1_expression=0,0.856402095563933,0.563817616383885,0,0,0.872338524100369,0,0.631719873426831,0,0,0,0.436882744260345,0.263766978228454,0,0,1.34465029290355,0,1.46062018077475,0,0.369363174230364,0.204000691244253,0.626909442956176,0.572471974262113,0.273748850145768,0.125542639594803,0.229240217243854,0.164201178899891,0.157421562627358,0,0,0,0,0.30120591877825,0,0.0774672005803016,0.284338464974843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393010762749165,0,0,0,0,0,0.111410456885174,0,0,0.270803863765016,0,0,0,0,0,0,0.535081656179426,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.802320587350522,0.289648807765598,0,0.670700859703636,0.12786256184353,0,1.50401373190767,0.869079113764942,0,0,0.0945348171640679,0.443458794925128,0.87834785693126,27.6365849300174,0,0,0,0,0,0,0,0,0.39752481473341,0,0,0,0.419499436209906,0.275118041940067,0,0,0.35576626268671,0,0.402829317109147,0,0.24406205754817,0.367663080345869,1.62028389576352,0.357198913136319,0,0.112611480483322,0,0,0.183201743930407,0,0,0,0,0.12663051166458,0.397227542439656,0.286836620748814,0.354668382198357,0,0,0,0,0.404132016209064,0.326923806226917,0.151357427644931,0,0.468642863667593,0,0,0.149448680551801,0.822041490506354,0.161872944368132,0.702254033511242,0.204154171254893,0.245668634623536,0.723280468230358,0,0.247266929278557,0,0,0,0.250237039743928,0,0.438977620880838,0,0,0.453728732640084,0.179389635688862,0.213557388818567,0.211931901159562,0,0.206105058476878,0.257640540045629,0.18611685633159,0.843881661206331,0.389748020644795,0.504867548488229,0.368199594569197,0.484938170456436,0.355009592516614,0.10075209822764,0.508681776931463,0,0,0,0.121973706129595,0.397589304964456,0.232387885739037,0.829288440122964,0.252320850875628,0,0,0,0,0.464367928031979,0,0.236613600079688,0,0.241011029883482,0,0.217879444092406,0,0.134831308160164,0.196221465125346,0.38474715694639,0,0,0,0,0,0,0.590789906681404,0,0,0.343135620597051,0,0,0,0.185176890317059,0,0,0,0.34779121492523,0.234817388471643,0.577465791044295,0,0.190254152234598,0,0,0,0,0,0,0,0.141775097242386,0.179117045405697,0,0,0,0,0,0.288239906833923,0,0.888970520090367,0.381988425558278,0,0,0,0.600686115687835,0.571652865261156,0.336393253036082,0.43596006883328,0.51336800074665,0.129271715757778,0,0.845302752556,0.26593811658487,0,0.257207374262142,0,0,0,0,0,0.65147236858747,0.355391948742546,0,0.904318131178758,0.871533458600294,0.499864955910285,0,0,0,0.718874566474748,1.14861935834114,0,0,0.205476322550383,0.358121926479791,0,0,0,0.128343036279748,1.27047312111232,0,0,0.335032530668698,2.55175500661265,0,0,0,0.24538298343828,0.500170521059677,0.271265023699736,0.207970861530807,0.535286966391485,0.157702415033935,0.35142424497814,0.300946099727719,0,1.03473071292505,0,0.184369168541703,0.781952530212746,0.391602314925481,0,0,0,0.106727557803444,0.303127571446259,0,0,0,0.767309866440312,0.561320188866147,0.640695746278505,1.02341449813341,0.482561763430822,0,0.462629081407967,0,0.410635780069046,0.519254429183621,0,0,0,0,0.229628896329213,0.182091168006717,0,0.451199612907412,0.231046011313244,0,0,0.527758144464379,0,0.170093705276516,0,0,0.270946437543853,1.50506932156456,0,0,0,0,0,0.256450125116389,0,0.650756789328606,2.16386124460217,0.0915694648183434,0.082509499920588,1.14853107599234,0.650060246036521,1.6068392984416,0.386682873168488,0.154048617114644,0.460511024178389,0.551346289938122,1.07420244868274,0.145016693914229,0.170453254832202,0.178064071293475,0,0.384380134730212,0.127612712494584,0.10115778085555,0,0.31481234683064,0,0,0.532306030317022,0,0,0.143124886741991,0,0,0,0.767693373934002,0.855877976067841,0.318203247925937,0,0,0,0.235624804691373,0.404364963146632,0,0,0.48763373908959,0.243713489631284,0,0.545999645631943,0.424216295861138,0,0,0,0,0,0,0,0,0.281695602532241,0.430234056612155,0.294747123039363,0.35667105148125,0,0.211107635297664,0,0,0,0,0,0,1.60044461320525,0,0,0,0,0,0,0,0,0,0,0,0,0.427296284509893,0,0.245040215981032,0,0.721346064882224,0,0,0,0,0.211673582723883,0.324621940274555,0,0,0,0,0,0,0,0,0,0,0,0.333698283423817,0,0,0,0.270455678475983,0.33307196799782,0,0,0,0,0.111443384277478,0,0.47748896947538,0,0,0,1.68803299692615,0,0,1.26675244876796,4.18420775327246,0.276283915531148,0.503865495708552,0.102268682502155,0,0.311039587661807,0.269605053441981,0,0.511572370226872,0.0986434056369336,0,0,1.93866549219044,1.76259386507517,1.99613798001194,0,0.699679999969566,0,0.227586896570999,0,1.41832609060762,0.344743373241465,0.291604613383254,0.173624994933292,7.97167247232455,6.39161124714662,0,0.110579259931225,0,2.4132393686937,0,0.41827123283581,0.846452843541768,0,0.23056390438806,0,0.217294743844016,0,0.366390373607449,0,0,0.156980256395025,0,0.225595660617181,0,0,0,0,0,4.40728582029699,0,0.865554558968364,0,0,0,0.296521128680622,0.494255755786011,0.104421949505455,5.32468950547349,0,2.57690890297873,0,1.76098157038881,0,0.789168805698781,1.20990716048664,0.61214552326098,0.6318657962848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|short_description=p1@CCDC65 | |||
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Latest revision as of 14:38, 18 September 2015
Short description: | p1@CCDC65 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CCDC65_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 0bp_to_ENST00000320516, ENST00000547861, ENST00000552942_5end |
EntrezGene: | CCDC65 |
HGNC: | 29937 |
UniProt: | Q8IXS2F8W0R6F8VR42 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data