FFCP PHASE1:Hg19::chr4:74281831..74281845,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=213 | |EntrezGene=213 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=399 | |HGNC=399 | ||
|TSSclassifier=strong | |||
|UniProt=P02768 | |UniProt=P02768 | ||
|association_with_transcript=-161bp_to_BC014308_5end | |association_with_transcript=-161bp_to_BC014308_5end | ||
|cluster_id=chr4:74281831..74281845,+ | |||
|coexpression_cluster_id=C55 | |||
|description=CAGE_peak_8_at_ALB_5end | |description=CAGE_peak_8_at_ALB_5end | ||
|id=chr4:74281831..74281845,+ | |id=chr4:74281831..74281845,+ | ||
|ontology_enrichment_celltype=CL:0000181!2.69e-17!12;CL:0000417!2.69e-17!12;CL:0000668!2.69e-17!12;CL:0000414!2.69e-17!12;CL:0000412!2.69e-17!12;CL:0000182!2.69e-17!12;CL:0002563!2.67e-13!4;CL:0002253!2.12e-07!2;CL:0000223!2.31e-07!59 | |ontology_enrichment_celltype=CL:0000181!2.69e-17!12;CL:0000417!2.69e-17!12;CL:0000668!2.69e-17!12;CL:0000414!2.69e-17!12;CL:0000412!2.69e-17!12;CL:0000182!2.69e-17!12;CL:0002563!2.67e-13!4;CL:0002253!2.12e-07!2;CL:0000223!2.31e-07!59 | ||
|ontology_enrichment_celltype_v019=CL:0000182;3.38e-38;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,3.38e-38,12;CL:0000223,2.42e-08,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;1.57e-41;11!UBERON:0009497;2.92e-35;13!UBERON:0001041;1.20e-15;30!UBERON:0003104;5.27e-15;31 | |||
|ontology_enrichment_disease=DOID:8552!9.73e-14!1 | |||
|ontology_enrichment_disease_v019=DOID:7;1.21e-07;39 | |||
|ontology_enrichment_disease_v019_2=DOID:7,2.73e-07,39 | |||
|ontology_enrichment_uberon=UBERON:0002107!1.19e-23!19;UBERON:0006925!1.19e-23!19;UBERON:0008836!1.19e-23!19;UBERON:0008835!2.14e-20!22;UBERON:0003894!2.14e-20!22;UBERON:0009854!1.69e-19!23;UBERON:0007499!6.43e-18!25;UBERON:0009497!6.43e-18!25;UBERON:0000015!6.43e-18!25;UBERON:0002423!6.43e-18!25;UBERON:0006235!6.43e-18!25;UBERON:0004161!6.43e-18!25;UBERON:0003929!9.47e-18!54;UBERON:0005057!3.22e-17!26;UBERON:0009856!3.22e-17!26;UBERON:0002368!4.99e-17!35;UBERON:0002365!2.14e-14!31;UBERON:0002330!2.14e-14!31;UBERON:0005911!5.19e-14!82;UBERON:0001242!2.67e-13!4;UBERON:0001262!2.67e-13!4;UBERON:0004786!2.67e-13!4;UBERON:0004808!2.67e-13!4;UBERON:0001277!2.67e-13!4;UBERON:0000949!4.01e-13!45;UBERON:0003350!7.89e-11!5;UBERON:0005172!1.17e-10!55;UBERON:0005173!1.17e-10!55;UBERON:0002530!7.20e-10!59;UBERON:0002417!1.50e-09!61;UBERON:0000916!1.50e-09!61;UBERON:0001007!9.03e-07!155;UBERON:0001555!9.03e-07!155;UBERON:0007026!9.03e-07!155;UBERON:0004921!9.13e-07!129;UBERON:0004185!9.13e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;1.99e-37;19!UBERON:0006925;1.99e-37;19!UBERON:0002423;1.39e-28;25!UBERON:0002365;2.01e-21;31!UBERON:0002330;2.01e-21;31!UBERON:0002368;2.04e-21;33!UBERON:0000949;2.81e-14;43!UBERON:0002530;8.63e-10;57!UBERON:0002417;1.32e-09;58!UBERON:0000916;1.32e-09;58!UBERON:0005172;1.08e-08;52!UBERON:0005173;1.08e-08;52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,2.06e-37,19;UBERON:0006925,2.06e-37,19;UBERON:0008836,2.06e-37,19;UBERON:0008835,2.17e-32,22;UBERON:0003894,2.17e-32,22;UBERON:0009854,5.24e-31,23;UBERON:0007499,1.43e-28,25;UBERON:0009497,1.43e-28,25;UBERON:0000015,1.43e-28,25;UBERON:0002423,1.43e-28,25;UBERON:0006235,1.43e-28,25;UBERON:0004161,1.43e-28,25;UBERON:0009856,1.71e-27,26;UBERON:0002365,3.84e-23,31;UBERON:0002330,3.84e-23,31;UBERON:0002368,1.49e-20,35;UBERON:0000949,4.39e-16,45;UBERON:0003929,1.81e-13,54;UBERON:0005172,1.81e-13,54;UBERON:0005173,1.81e-13,54;UBERON:0002530,2.34e-12,59;UBERON:0002417,3.71e-12,60;UBERON:0000916,3.71e-12,60;UBERON:0005911,5.61e-09,82;UBERON:0001041,1.78e-08,87;UBERON:0005177,2.47e-07,101 | |||
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|short_description=p8@ALB | |short_description=p8@ALB | ||
}} | }} |
Latest revision as of 13:04, 18 September 2015
Short description: | p8@ALB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_ALB_5end |
Coexpression cluster: | C55_hepatocellular_Intestinal_liver_Prostate_fibrosarcoma_Hepatocyte_hepatoblastoma |
Association with transcript: | -161bp_to_BC014308_5end |
EntrezGene: | ALB |
HGNC: | 399 |
UniProt: | P02768 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 3.38e-38 | 12 |
endodermal cell | 2.42e-08 | 58 |
Ontology term | p-value | n |
---|---|---|
liver | 2.06e-37 | 19 |
digestive gland | 2.06e-37 | 19 |
liver bud | 2.06e-37 | 19 |
hepatic diverticulum | 2.17e-32 | 22 |
liver primordium | 2.17e-32 | 22 |
digestive tract diverticulum | 5.24e-31 | 23 |
epithelial sac | 1.43e-28 | 25 |
epithelium of foregut-midgut junction | 1.43e-28 | 25 |
anatomical boundary | 1.43e-28 | 25 |
hepatobiliary system | 1.43e-28 | 25 |
foregut-midgut junction | 1.43e-28 | 25 |
septum transversum | 1.43e-28 | 25 |
sac | 1.71e-27 | 26 |
exocrine gland | 3.84e-23 | 31 |
exocrine system | 3.84e-23 | 31 |
endocrine gland | 1.49e-20 | 35 |
endocrine system | 4.39e-16 | 45 |
gut epithelium | 1.81e-13 | 54 |
abdomen element | 1.81e-13 | 54 |
abdominal segment element | 1.81e-13 | 54 |
gland | 2.34e-12 | 59 |
abdominal segment of trunk | 3.71e-12 | 60 |
abdomen | 3.71e-12 | 60 |
endo-epithelium | 5.61e-09 | 82 |
foregut | 1.78e-08 | 87 |
trunk region element | 2.47e-07 | 101 |
Ontology term | p-value | n |
---|---|---|
disease of anatomical entity | 2.73e-07 | 39 |