FFCP PHASE1:Hg19::chr3:47620323..47620366,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10675 | |EntrezGene=10675 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=2467 | |HGNC=2467 | ||
|TSSclassifier=strong | |||
|UniProt=O95196 | |UniProt=O95196 | ||
|association_with_transcript=0bp_to_NM_001206943,NM_001206944,NM_006574,uc003cro.3,uc003crp.3_5end | |association_with_transcript=0bp_to_NM_001206943,NM_001206944,NM_006574,uc003cro.3,uc003crp.3_5end | ||
|cluster_id=chr3:47620323..47620366,- | |||
|coexpression_cluster_id=C3 | |coexpression_cluster_id=C3 | ||
|description=CAGE_peak_1_at_CSPG5_5end | |description=CAGE_peak_1_at_CSPG5_5end | ||
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|ontology_enrichment_celltype=CL:0002319!9.30e-08!25 | |ontology_enrichment_celltype=CL:0002319!9.30e-08!25 | ||
|ontology_enrichment_celltype_v019=CL:0002319;1.18e-08;25 | |ontology_enrichment_celltype_v019=CL:0002319;1.18e-08;25 | ||
|ontology_enrichment_celltype_v019_2=CL:0000047,1.16e-09,8;CL:0002319,9.84e-09,25;CL:0000540,9.74e-07,6;CL:0000031,9.74e-07,6;CL:0000404,9.74e-07,6 | |||
|ontology_enrichment_development_v019=UBERON:0006601;4.94e-16;82!UBERON:0006238;2.59e-07;10 | |ontology_enrichment_development_v019=UBERON:0006601;4.94e-16;82!UBERON:0006238;2.59e-07;10 | ||
|ontology_enrichment_disease=DOID:0050687!1.22e-07!143 | |ontology_enrichment_disease=DOID:0050687!1.22e-07!143 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005743!2.21e-46!86;UBERON:0000073!1.35e-45!94;UBERON:0001016!1.35e-45!94;UBERON:0001017!5.56e-44!82;UBERON:0001049!1.61e-38!57;UBERON:0005068!1.61e-38!57;UBERON:0006241!1.61e-38!57;UBERON:0007135!1.61e-38!57;UBERON:0000955!2.45e-35!69;UBERON:0006238!2.45e-35!69;UBERON:0002346!1.95e-34!90;UBERON:0003075!1.76e-32!86;UBERON:0007284!1.76e-32!86;UBERON:0002616!6.33e-31!59;UBERON:0003080!6.56e-30!42;UBERON:0002780!2.40e-29!41;UBERON:0001890!2.40e-29!41;UBERON:0006240!2.40e-29!41;UBERON:0001893!1.36e-26!34;UBERON:0002020!1.82e-26!34;UBERON:0003528!1.82e-26!34;UBERON:0003056!5.66e-26!61;UBERON:0002791!9.59e-26!33;UBERON:0000924!2.06e-25!173;UBERON:0006601!2.06e-25!173;UBERON:0001869!4.32e-25!32;UBERON:0007023!8.02e-24!115;UBERON:0004121!9.68e-24!169;UBERON:0000033!6.23e-20!123;UBERON:0000956!1.27e-19!25;UBERON:0000203!1.27e-19!25;UBERON:0000153!3.19e-19!129;UBERON:0007811!3.19e-19!129;UBERON:0002619!7.80e-18!22;UBERON:0001950!3.22e-16!20;UBERON:0000064!1.26e-10!219;UBERON:0003076!1.26e-09!15;UBERON:0003057!1.26e-09!15;UBERON:0000025!1.11e-08!194;UBERON:0000922!1.62e-08!612;UBERON:0002420!2.24e-08!9;UBERON:0007245!2.24e-08!9;UBERON:0010009!2.24e-08!9;UBERON:0010011!2.24e-08!9;UBERON:0000454!2.24e-08!9;UBERON:0002308!2.85e-08!9;UBERON:0000125!2.85e-08!9;UBERON:0000475!4.20e-08!365;UBERON:0004732!4.39e-08!13;UBERON:0000062!1.31e-07!511;UBERON:0004733!1.51e-07!12;UBERON:0002028!1.51e-07!12;UBERON:0007277!1.51e-07!12;UBERON:0000119!1.53e-07!312;UBERON:0000483!2.00e-07!309;UBERON:0002298!3.85e-07!8;UBERON:0002050!7.82e-07!605;UBERON:0005423!7.82e-07!605;UBERON:0009663!8.19e-07!7 | |ontology_enrichment_uberon=UBERON:0005743!2.21e-46!86;UBERON:0000073!1.35e-45!94;UBERON:0001016!1.35e-45!94;UBERON:0001017!5.56e-44!82;UBERON:0001049!1.61e-38!57;UBERON:0005068!1.61e-38!57;UBERON:0006241!1.61e-38!57;UBERON:0007135!1.61e-38!57;UBERON:0000955!2.45e-35!69;UBERON:0006238!2.45e-35!69;UBERON:0002346!1.95e-34!90;UBERON:0003075!1.76e-32!86;UBERON:0007284!1.76e-32!86;UBERON:0002616!6.33e-31!59;UBERON:0003080!6.56e-30!42;UBERON:0002780!2.40e-29!41;UBERON:0001890!2.40e-29!41;UBERON:0006240!2.40e-29!41;UBERON:0001893!1.36e-26!34;UBERON:0002020!1.82e-26!34;UBERON:0003528!1.82e-26!34;UBERON:0003056!5.66e-26!61;UBERON:0002791!9.59e-26!33;UBERON:0000924!2.06e-25!173;UBERON:0006601!2.06e-25!173;UBERON:0001869!4.32e-25!32;UBERON:0007023!8.02e-24!115;UBERON:0004121!9.68e-24!169;UBERON:0000033!6.23e-20!123;UBERON:0000956!1.27e-19!25;UBERON:0000203!1.27e-19!25;UBERON:0000153!3.19e-19!129;UBERON:0007811!3.19e-19!129;UBERON:0002619!7.80e-18!22;UBERON:0001950!3.22e-16!20;UBERON:0000064!1.26e-10!219;UBERON:0003076!1.26e-09!15;UBERON:0003057!1.26e-09!15;UBERON:0000025!1.11e-08!194;UBERON:0000922!1.62e-08!612;UBERON:0002420!2.24e-08!9;UBERON:0007245!2.24e-08!9;UBERON:0010009!2.24e-08!9;UBERON:0010011!2.24e-08!9;UBERON:0000454!2.24e-08!9;UBERON:0002308!2.85e-08!9;UBERON:0000125!2.85e-08!9;UBERON:0000475!4.20e-08!365;UBERON:0004732!4.39e-08!13;UBERON:0000062!1.31e-07!511;UBERON:0004733!1.51e-07!12;UBERON:0002028!1.51e-07!12;UBERON:0007277!1.51e-07!12;UBERON:0000119!1.53e-07!312;UBERON:0000483!2.00e-07!309;UBERON:0002298!3.85e-07!8;UBERON:0002050!7.82e-07!605;UBERON:0005423!7.82e-07!605;UBERON:0009663!8.19e-07!7 | ||
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| ||
|short_description=p1@CSPG5 | |short_description=p1@CSPG5 | ||
}} | }} |
Latest revision as of 12:44, 18 September 2015
Short description: | p1@CSPG5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CSPG5_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 0bp_to_NM_001206943, NM_001206944, NM_006574, uc003cro.3, uc003crp.3_5end |
EntrezGene: | CSPG5 |
HGNC: | 2467 |
UniProt: | O95196 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 1.16e-09 | 8 |
neural cell | 9.84e-09 | 25 |
neuron | 9.74e-07 | 6 |
neuroblast | 9.74e-07 | 6 |
electrically signaling cell | 9.74e-07 | 6 |