FFCP PHASE1:Hg19::chr11:58695096..58695118,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=92292 | |EntrezGene=92292 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30519 | |HGNC=30519 | ||
|TSSclassifier=strong | |||
|UniProt=E9PJV1,E9PP99,A9ZM15,Q969I3 | |UniProt=E9PJV1,E9PP99,A9ZM15,Q969I3 | ||
|association_with_transcript=0bp_to_ENST00000525608,ENST00000526351,NM_001220494_5end | |association_with_transcript=0bp_to_ENST00000525608,ENST00000526351,NM_001220494_5end | ||
|cluster_id=chr11:58695096..58695118,+ | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_3_at_GLYATL1_5end | |description=CAGE_peak_3_at_GLYATL1_5end | ||
|id=chr11:58695096..58695118,+ | |id=chr11:58695096..58695118,+ | ||
|ontology_enrichment_celltype=CL:0002322!2.10e-09!5 | |ontology_enrichment_celltype=CL:0002322!2.10e-09!5 | ||
|ontology_enrichment_celltype_v019=CL:0000540;8.20e-10;6!CL:0000404;8.20e-10;6!CL:0000785;3.00e-07;1!CL:0000819;3.00e-07;1!CL:0002563;5.71e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,1.68e-12,8;CL:0000540,6.64e-10,6;CL:0000031,6.64e-10,6;CL:0000404,6.64e-10,6;CL:0000819,3.84e-07,1;CL:0002563,6.85e-07,4 | |||
|ontology_enrichment_development_v019=CL:0000031;8.20e-10;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060073;3.00e-07;1!DOID:8675;3.00e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060073,3.84e-07,1;DOID:8675,3.84e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!3.06e-17!115;UBERON:0005743!1.27e-16!86;UBERON:0003075!2.44e-15!86;UBERON:0007284!2.44e-15!86;UBERON:0000073!5.07e-15!94;UBERON:0001016!5.07e-15!94;UBERON:0001017!2.51e-14!82;UBERON:0002346!3.20e-14!90;UBERON:0003056!7.91e-14!61;UBERON:0001049!5.15e-13!57;UBERON:0005068!5.15e-13!57;UBERON:0006241!5.15e-13!57;UBERON:0007135!5.15e-13!57;UBERON:0000153!3.17e-12!129;UBERON:0007811!3.17e-12!129;UBERON:0002616!4.18e-11!59;UBERON:0002780!6.78e-10!41;UBERON:0001890!6.78e-10!41;UBERON:0006240!6.78e-10!41;UBERON:0000033!7.17e-10!123;UBERON:0004121!9.75e-10!169;UBERON:0003080!1.50e-09!42;UBERON:0000924!3.01e-09!173;UBERON:0006601!3.01e-09!173;UBERON:0000955!3.63e-09!69;UBERON:0006238!3.63e-09!69;UBERON:0007625!1.58e-08!11;UBERON:0002020!1.49e-07!34;UBERON:0003528!1.49e-07!34;UBERON:0002298!1.72e-07!8;UBERON:0001893!2.36e-07!34;UBERON:0000488!6.17e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0001905;4.54e-14;2!UBERON:0002757;4.54e-14;2!UBERON:0010134;4.54e-14;2!UBERON:0005408;4.54e-14;2!UBERON:0001899;4.54e-14;2!UBERON:0002370;7.95e-13;2!UBERON:0005058;7.95e-13;2!UBERON:0009113;7.95e-13;2!UBERON:0002368;4.43e-09;33!UBERON:0003296;1.89e-07;4!UBERON:0010133;1.89e-07;4!UBERON:0002784;1.89e-07;4!UBERON:0000949;2.61e-07;43!UBERON:0001301;3.00e-07;1!UBERON:0001242;5.71e-07;4!UBERON:0001262;5.71e-07;4!UBERON:0004786;5.71e-07;4!UBERON:0004808;5.71e-07;4!UBERON:0001277;5.71e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,4.55e-14,2;UBERON:0002757,4.55e-14,2;UBERON:0010134,4.55e-14,2;UBERON:0005408,4.55e-14,2;UBERON:0001899,4.55e-14,2;UBERON:0002368,2.02e-10,35;UBERON:0000949,7.76e-08,45;UBERON:0003929,9.08e-08,54;UBERON:0003296,1.89e-07,4;UBERON:0010133,1.89e-07,4;UBERON:0002784,1.89e-07,4;UBERON:0002530,3.88e-07,59;UBERON:0001301,4.61e-07,1;UBERON:0002370,5.89e-07,4;UBERON:0005058,5.89e-07,4;UBERON:0009113,5.89e-07,4;UBERON:0003295,5.89e-07,4;UBERON:0005562,5.89e-07,4;UBERON:0001242,6.85e-07,4;UBERON:0001262,6.85e-07,4;UBERON:0004786,6.85e-07,4;UBERON:0004808,6.85e-07,4;UBERON:0001277,6.85e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.684372125364421,0,0,0,0,0,0,0,0,0,0,1.31694240986513,0.142169232487422,0.880801318004542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.526768169550154,0.196709770113833,0,0,0,0.32592226663359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.651083453856419,0,0.150575119077773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22895262313288,0.221729397462564,0.175669571386252,1.24430121722827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34171076742555,0.397589304964456,0.69716365721711,0.829288440122964,1.00928340350251,2.91981887260664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.2106041786197,0.982827216677626,4.13552934676983,1.32438929824395,2.7057456479485,0.171567810298526,0,0,0,0,0,0,0,0.579652024875384,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,1.30139853857622,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0877350463246,0,0,0,0,0,0,0.15403067420883,0,0,0.211103257785751,0,0,0,0,0,0,0,0.831076008928724,0,0,0,0,0.656029291399411,0.325378394664303,6.38854272215878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318203247925937,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.61304623806218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211125408127993,0.19924798825107,0,0,0,0.123084805461069,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47698645169619,0,0.848118428603645,1.08194319871046,0,0,0,0,0,0,0.134802265961354,0,0,1.094728735294,0,0,0,3.62972148145992,0,0,0,0,0,0,0,0,0,0,0,0,0,1.04836000945218,0,0,0,0,0.0969890164884194,0,0.451961481561065,0,0,0.126621591911757,0.391102765469606,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.3758161177654,1.92555211236127,3.32352270423348,0,0,0.0607495566580247,0,3.94028536495991,3.19972987623488,0,0,0,0,0,0,0,0,0,0,0,0,0,6.00864158080138,7.95041333473328,0.646414781807753,0.26446520348538,0,0,0.106787412567695,0,0,0,0,0.974340787047167,0,0,0,0,0,0,0,0.122026264901963,0.250381861413,0,0.887432412294818,0.372578417648301,0,0,0,0,0,0,0,0,0,0,0,0.251567901752575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0.159633859057151,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0.225630985047772,0,0,0,0,0,0.135075169236789,0,0,0.0634158101939068,0,0,0,0,0,8.57122937405259,22.5310093886612,0,0.227662191351298,0,0,0,0.951576261675644,0.0657727735628491,0,0,0.549451649953598,0.314231179832004,0.560544326627578,0,0.431855182437243,0,0.929195074296532,0,0,0,0,0,0,0,0.860454717640555,0,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.6385724018903,0.905777061400041,0.0771741581079447,1.5299169235277,0,0,0,0.392616934229891,0,0.4226557275834,0,0,0.128915775947154,0,0,0,0,0,0.917458566809082,0.286679166302903,0,0,0,0,0,0,0,0,0,0,0,0.801652215796681,0,0,0,0,0,0.103432995861895,0.426467963801962,0.952257725854961,1.35636710655613,1.42771842880473,0,0,0.202117188958219,0.217716747896961,0,0.606168477131288,1.14755528628282,0.332660356546013,0,0,0,0,0,0,0.406896178315738,0,0.201273793591026,0 | |phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.684372125364421,0,0,0,0,0,0,0,0,0,0,1.31694240986513,0.142169232487422,0.880801318004542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.526768169550154,0.196709770113833,0,0,0,0.32592226663359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.651083453856419,0,0.150575119077773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22895262313288,0.221729397462564,0.175669571386252,1.24430121722827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34171076742555,0.397589304964456,0.69716365721711,0.829288440122964,1.00928340350251,2.91981887260664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.2106041786197,0.982827216677626,4.13552934676983,1.32438929824395,2.7057456479485,0.171567810298526,0,0,0,0,0,0,0,0.579652024875384,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,1.30139853857622,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0877350463246,0,0,0,0,0,0,0.15403067420883,0,0,0.211103257785751,0,0,0,0,0,0,0,0.831076008928724,0,0,0,0,0.656029291399411,0.325378394664303,6.38854272215878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318203247925937,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.61304623806218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211125408127993,0.19924798825107,0,0,0,0.123084805461069,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47698645169619,0,0.848118428603645,1.08194319871046,0,0,0,0,0,0,0.134802265961354,0,0,1.094728735294,0,0,0,3.62972148145992,0,0,0,0,0,0,0,0,0,0,0,0,0,1.04836000945218,0,0,0,0,0.0969890164884194,0,0.451961481561065,0,0,0.126621591911757,0.391102765469606,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.3758161177654,1.92555211236127,3.32352270423348,0,0,0.0607495566580247,0,3.94028536495991,3.19972987623488,0,0,0,0,0,0,0,0,0,0,0,0,0,6.00864158080138,7.95041333473328,0.646414781807753,0.26446520348538,0,0,0.106787412567695,0,0,0,0,0.974340787047167,0,0,0,0,0,0,0,0.122026264901963,0.250381861413,0,0.887432412294818,0.372578417648301,0,0,0,0,0,0,0,0,0,0,0,0.251567901752575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0.159633859057151,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0.225630985047772,0,0,0,0,0,0.135075169236789,0,0,0.0634158101939068,0,0,0,0,0,8.57122937405259,22.5310093886612,0,0.227662191351298,0,0,0,0.951576261675644,0.0657727735628491,0,0,0.549451649953598,0.314231179832004,0.560544326627578,0,0.431855182437243,0,0.929195074296532,0,0,0,0,0,0,0,0.860454717640555,0,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.6385724018903,0.905777061400041,0.0771741581079447,1.5299169235277,0,0,0,0.392616934229891,0,0.4226557275834,0,0,0.128915775947154,0,0,0,0,0,0.917458566809082,0.286679166302903,0,0,0,0,0,0,0,0,0,0,0,0.801652215796681,0,0,0,0,0,0.103432995861895,0.426467963801962,0.952257725854961,1.35636710655613,1.42771842880473,0,0,0.202117188958219,0.217716747896961,0,0.606168477131288,1.14755528628282,0.332660356546013,0,0,0,0,0,0,0.406896178315738,0,0.201273793591026,0 | ||
|short_description=p3@GLYATL1 | |short_description=p3@GLYATL1 | ||
}} | }} |
Latest revision as of 11:39, 18 September 2015
Short description: | p3@GLYATL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_GLYATL1_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 0bp_to_ENST00000525608, ENST00000526351, NM_001220494_5end |
EntrezGene: | GLYATL1 |
HGNC: | 30519 |
UniProt: | E9PJV1E9PP99A9ZM15Q969I3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 1.68e-12 | 8 |
neuron | 6.64e-10 | 6 |
neuroblast | 6.64e-10 | 6 |
electrically signaling cell | 6.64e-10 | 6 |
B-1 B cell | 3.84e-07 | 1 |
intestinal epithelial cell | 6.85e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
pineal body | 4.55e-14 | 2 |
regional part of epithalamus | 4.55e-14 | 2 |
secretory circumventricular organ | 4.55e-14 | 2 |
circumventricular organ | 4.55e-14 | 2 |
epithalamus | 4.55e-14 | 2 |
endocrine gland | 2.02e-10 | 35 |
endocrine system | 7.76e-08 | 45 |
gut epithelium | 9.08e-08 | 54 |
gland of diencephalon | 1.89e-07 | 4 |
neuroendocrine gland | 1.89e-07 | 4 |
regional part of diencephalon | 1.89e-07 | 4 |
gland | 3.88e-07 | 59 |
epididymis | 4.61e-07 | 1 |
thymus | 5.89e-07 | 4 |
hemolymphoid system gland | 5.89e-07 | 4 |
thymic region | 5.89e-07 | 4 |
pharyngeal gland | 5.89e-07 | 4 |
thymus primordium | 5.89e-07 | 4 |
intestinal mucosa | 6.85e-07 | 4 |
wall of intestine | 6.85e-07 | 4 |
gastrointestinal system mucosa | 6.85e-07 | 4 |
gastrointestinal system epithelium | 6.85e-07 | 4 |
intestinal epithelium | 6.85e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
lymphatic system cancer | 3.84e-07 | 1 |
lymphosarcoma | 3.84e-07 | 1 |