FFCP PHASE1:Hg19::chr17:80009330..80009379,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr17:80009330..80009379,+
|short_description=p2@GPS1
|description=CAGE_peak_2_at_GPS1_5end
|association_with_transcript=-383bp_to_ENST00000392358,NM_004127,NM_...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2873 | |EntrezGene=2873 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4549 | |HGNC=4549 | ||
|TSSclassifier=strong | |||
|UniProt=Q13098,A8K070 | |UniProt=Q13098,A8K070 | ||
|association_with_transcript=-383bp_to_ENST00000392358,NM_004127,NM_212492,uc002kdk.1,uc002kdl.1,uc002kdm.1,uc002kdn.1,uc002kdo.1,uc010dij.1,uc010wvh.1_5end | |||
|cluster_id=chr17:80009330..80009379,+ | |||
|description=CAGE_peak_2_at_GPS1_5end | |||
|id=chr17:80009330..80009379,+ | |||
|ontology_enrichment_celltype=CL:0002321!2.50e-11!248;CL:0000220!1.10e-10!246;CL:0000066!1.02e-09!254;CL:0000133!5.42e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0000128;6.24e-08;7!CL:0000126;6.24e-08;7!CL:0000127;6.24e-08;7!CL:0002322;1.53e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,1.24e-08,250;CL:0000133,2.10e-08,59;CL:0000128,2.85e-08,7;CL:0000126,2.85e-08,7;CL:0000127,2.85e-08,7;CL:0002453,2.85e-08,7;CL:0002322,1.57e-07,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000481!3.22e-08!347;UBERON:0002113!9.94e-07!27;UBERON:0003918!9.94e-07!27;UBERON:0005095!9.94e-07!27;UBERON:0007687!9.94e-07!27 | |||
|ontology_enrichment_uberon_v019=UBERON:0002113;4.49e-08;24!UBERON:0011143;4.49e-08;24!UBERON:0007625;3.80e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002113,4.09e-08,26;UBERON:0003918,4.09e-08,26;UBERON:0011143,4.09e-08,26;UBERON:0005095,4.09e-08,26;UBERON:0007687,4.09e-08,26;UBERON:0005172,1.07e-07,54;UBERON:0005173,1.07e-07,54;UBERON:0007625,1.69e-07,11;UBERON:0002417,8.22e-07,60;UBERON:0000916,8.22e-07,60 | |||
|phase1_expression=0.363356758541113,0.428201047781966,0.140954404095971,1.0007329835313,0,0,0,0.631719873426831,1.30592814099919,0.491467873003018,2.79120467188971,0.436882744260345,0.527533956456907,0.618831764800233,1.32558950291166,2.01697543935533,0,0.730310090387373,0.975865597581014,1.35433163884467,2.24400760368678,4.07491137921514,2.28988789704845,1.64249310087461,1.50651167513763,0.152826811495903,0.0821005894499457,0.0787107813136792,0,0,0.154816123316076,0,0.6024118375565,0.739508020333575,0,0,0.293600439334847,0.553995408531877,0,0.217010870715852,0,0,0,0.145398238779565,0,0,0,0,0,0,0,0.236482229888585,0,0,0,0,0,0,0,0,0,0.329851300186716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0.560508562981536,0.526768169550154,0,0,1.02800749499755,0.334372990781356,0.32592226663359,0,0,0.557052284425868,0.294605907474837,0,0.541607727530031,0.128091319725675,0,0.164437904603676,0.552700035571697,0.289803085735052,0.296573126324121,0,0,0.226618685395132,0.383220493601921,0.68725489096526,0,0.318565414324097,0,0,0,0.127986611154418,0,0.236777252044017,0.821127996921047,0.201606743224732,0,0.144824403882799,0,1.34140171940727,0.767175371061182,0,1.00267582127178,0.724232594804119,0,1.45990461090791,1.51255707462509,1.55210578223795,2.98638271356629,1.63723844372141,0.364295288292542,0,0,0,0,0,0.571994910780128,0.371457501329565,0.39752481473341,0,1.04142150482278,1.13061588384802,1.67799774483962,1.10047216776027,1.25396979922086,0.775250277507987,0.35576626268671,0,1.61131726843659,0.760272105718513,3.66093086322254,0,0.81014194788176,0.892997282840798,0.898117490504679,0.450445921933289,0,1.89853131913626,2.38162267109529,0,0,0.436094052142534,0,0.379891534993739,0.397227542439656,0.286836620748814,0.709336764396714,1.12135520028461,0,1.2333377420858,0.311211035399766,0.134710672069688,0.163461903113459,0.151357427644931,0.576175924479999,0.70296429550139,0,0,0.298897361103602,0.117434498643765,0,0,0.408308342509787,0.368502951935304,0.619954687054593,0,0,0,0,0.336672227908132,0.125118519871964,0.554128230968366,0.877955241761676,0.30648779579902,0.300476117813194,1.02088964844019,0,0.640672166455702,0.211931901159562,0.300091096084402,0.412210116953756,0,0.37223371266318,0.168776332241266,0,0.252433774244115,0.184099797284599,0.969876340912871,0,0.201504196455281,0,0.386521706326594,0.272746120590835,0,3.04934265323988,2.12047629314376,3.48581828608555,3.83545903556871,2.77552935963191,0.36497735907583,0,0.643240938192885,1.38134921352481,0.464367928031979,0.721879481669586,0.473227200159376,0,0.964044119533928,0.441175890929576,0,0.237270619111097,0.269662616320329,0.588664395376038,1.15424147083917,0.738155454624648,0,0.8231480226628,1.47008711385542,0,2.94848165003288,0.590789906681404,0,2.09080345523293,1.3725424823882,0.219500570817251,0,0.201057944823262,0.185176890317059,1.62904152655162,1.03993478527958,1.44331342025273,2.31860809950154,1.6437217193015,0.577465791044295,0,0.190254152234598,0,1.71697232418975,0.246217006087397,0,0.148631162288728,3.74935335947108,0,0.141775097242386,0.179117045405697,0,0,0,0,0.207328115540772,0,0.12624243342638,0.063497894292169,0.763976851116555,1.17217447210047,0,0.205654985406647,1.20137223137567,0.285826432630578,0.672786506072164,0.87192013766656,0.1466765716419,0.904902010304444,3.57656445851882,0.845302752556,1.06375246633948,2.08014873822732,0.514414748524284,1.41849132023278,0.266422179016099,0,1.62786481617433,1.64648067356154,0,0.355391948742546,0,0.301439377059586,0,0.499864955910285,0,0,0,0.239624855491583,4.59447743336456,0,1.01346914667305,0.205476322550383,0.358121926479791,0.112085143993527,0.591092280605782,0,0,1.01637849688985,0,0.773288812777695,1.00509759200609,0.637938751653163,0,0,0,1.10422342547226,2.00068208423871,1.35632511849868,1.03985430765404,0.535286966391485,0.473107245101804,0.585707074963566,1.20378439891088,2.27407504055985,0,1.99267679560631,1.10621501125022,0.260650843404249,3.13281851940385,3.43143423810856,0,0,0.213455115606889,0,6.65741758041988,3.32629322662648,0.496215615637554,0.153461973288062,1.12264037773229,0.384417447767103,0.511707249066704,0.482561763430822,0,0,0.710246901252508,0.328508624055237,1.03850885836724,0.464841513839837,1.93375119346596,0.200506470303285,0.276242966807689,0.114814448164607,0.182091168006717,1.31124414959424,1.35359883872224,0.308061348417659,5.49044838423799,0,0.527758144464379,1.13733384070897,0.680374821106063,0.647747748306418,1.54227252690289,3.79325012561394,2.50844886927427,1.27438136522519,0.831076008928724,2.23874754722178,0,0,1.02580050046556,2.29610251989794,0.325378394664303,2.26690225624989,0.54941678891006,0.577566499444116,0,0,0,0.870036464629098,0,0.15350367472613,0.137836572484531,0.537101224341368,0.580066775656914,0.426133137080504,0.356128142586949,0.495854746082934,0.192190067365106,0.127612712494584,0.30347334256665,0.929691098594572,0,0.6970372701606,0.308033580176089,0,0.869932992075073,0.74129687641568,0.429374660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|phase1_expression=0.363356758541113,0.428201047781966,0.140954404095971,1.0007329835313,0,0,0,0.631719873426831,1.30592814099919,0.491467873003018,2.79120467188971,0.436882744260345,0.527533956456907,0.618831764800233,1.32558950291166,2.01697543935533,0,0.730310090387373,0.975865597581014,1.35433163884467,2.24400760368678,4.07491137921514,2.28988789704845,1.64249310087461,1.50651167513763,0.152826811495903,0.0821005894499457,0.0787107813136792,0,0,0.154816123316076,0,0.6024118375565,0.739508020333575,0,0,0.293600439334847,0.553995408531877,0,0.217010870715852,0,0,0,0.145398238779565,0,0,0,0,0,0,0,0.236482229888585,0,0,0,0,0,0,0,0,0,0.329851300186716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0.560508562981536,0.526768169550154,0,0,1.02800749499755,0.334372990781356,0.32592226663359,0,0,0.557052284425868,0.294605907474837,0,0.541607727530031,0.128091319725675,0,0.164437904603676,0.552700035571697,0.289803085735052,0.296573126324121,0,0,0.226618685395132,0.383220493601921,0.68725489096526,0,0.318565414324097,0,0,0,0.127986611154418,0,0.236777252044017,0.821127996921047,0.201606743224732,0,0.144824403882799,0,1.34140171940727,0.767175371061182,0,1.00267582127178,0.724232594804119,0,1.45990461090791,1.51255707462509,1.55210578223795,2.98638271356629,1.63723844372141,0.364295288292542,0,0,0,0,0,0.571994910780128,0.371457501329565,0.39752481473341,0,1.04142150482278,1.13061588384802,1.67799774483962,1.10047216776027,1.25396979922086,0.775250277507987,0.35576626268671,0,1.61131726843659,0.760272105718513,3.66093086322254,0,0.81014194788176,0.892997282840798,0.898117490504679,0.450445921933289,0,1.89853131913626,2.38162267109529,0,0,0.436094052142534,0,0.379891534993739,0.397227542439656,0.286836620748814,0.709336764396714,1.12135520028461,0,1.2333377420858,0.311211035399766,0.134710672069688,0.163461903113459,0.151357427644931,0.576175924479999,0.70296429550139,0,0,0.298897361103602,0.117434498643765,0,0,0.408308342509787,0.368502951935304,0.619954687054593,0,0,0,0,0.336672227908132,0.125118519871964,0.554128230968366,0.877955241761676,0.30648779579902,0.300476117813194,1.02088964844019,0,0.640672166455702,0.211931901159562,0.300091096084402,0.412210116953756,0,0.37223371266318,0.168776332241266,0,0.252433774244115,0.184099797284599,0.969876340912871,0,0.201504196455281,0,0.386521706326594,0.272746120590835,0,3.04934265323988,2.12047629314376,3.48581828608555,3.83545903556871,2.77552935963191,0.36497735907583,0,0.643240938192885,1.38134921352481,0.464367928031979,0.721879481669586,0.473227200159376,0,0.964044119533928,0.441175890929576,0,0.237270619111097,0.269662616320329,0.588664395376038,1.15424147083917,0.738155454624648,0,0.8231480226628,1.47008711385542,0,2.94848165003288,0.590789906681404,0,2.09080345523293,1.3725424823882,0.219500570817251,0,0.201057944823262,0.185176890317059,1.62904152655162,1.03993478527958,1.44331342025273,2.31860809950154,1.6437217193015,0.577465791044295,0,0.190254152234598,0,1.71697232418975,0.246217006087397,0,0.148631162288728,3.74935335947108,0,0.141775097242386,0.179117045405697,0,0,0,0,0.207328115540772,0,0.12624243342638,0.063497894292169,0.763976851116555,1.17217447210047,0,0.205654985406647,1.20137223137567,0.285826432630578,0.672786506072164,0.87192013766656,0.1466765716419,0.904902010304444,3.57656445851882,0.845302752556,1.06375246633948,2.08014873822732,0.514414748524284,1.41849132023278,0.266422179016099,0,1.62786481617433,1.64648067356154,0,0.355391948742546,0,0.301439377059586,0,0.499864955910285,0,0,0,0.239624855491583,4.59447743336456,0,1.01346914667305,0.205476322550383,0.358121926479791,0.112085143993527,0.591092280605782,0,0,1.01637849688985,0,0.773288812777695,1.00509759200609,0.637938751653163,0,0,0,1.10422342547226,2.00068208423871,1.35632511849868,1.03985430765404,0.535286966391485,0.473107245101804,0.585707074963566,1.20378439891088,2.27407504055985,0,1.99267679560631,1.10621501125022,0.260650843404249,3.13281851940385,3.43143423810856,0,0,0.213455115606889,0,6.65741758041988,3.32629322662648,0.496215615637554,0.153461973288062,1.12264037773229,0.384417447767103,0.511707249066704,0.482561763430822,0,0,0.710246901252508,0.328508624055237,1.03850885836724,0.464841513839837,1.93375119346596,0.200506470303285,0.276242966807689,0.114814448164607,0.182091168006717,1.31124414959424,1.35359883872224,0.308061348417659,5.49044838423799,0,0.527758144464379,1.13733384070897,0.680374821106063,0.647747748306418,1.54227252690289,3.79325012561394,2.50844886927427,1.27438136522519,0.831076008928724,2.23874754722178,0,0,1.02580050046556,2.29610251989794,0.325378394664303,2.26690225624989,0.54941678891006,0.577566499444116,0,0,0,0.870036464629098,0,0.15350367472613,0.137836572484531,0.537101224341368,0.580066775656914,0.426133137080504,0.356128142586949,0.495854746082934,0.192190067365106,0.127612712494584,0.30347334256665,0.929691098594572,0,0.6970372701606,0.308033580176089,0,0.869932992075073,0.74129687641568,0.429374660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| ||
|short_description=p2@GPS1 | |||
}} | }} |
Latest revision as of 10:57, 18 September 2015
Short description: | p2@GPS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_GPS1_5end |
Coexpression cluster: | NA |
Association with transcript: | -383bp_to_ENST00000392358, NM_004127, NM_212492, uc002kdk.1, uc002kdl.1, uc002kdm.1, uc002kdn.1, uc002kdo.1, uc010dij.1, uc010wvh.1_5end |
EntrezGene: | GPS1 |
HGNC: | 4549 |
UniProt: | Q13098A8K070 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 1.24e-08 | 250 |
neurectodermal cell | 2.10e-08 | 59 |
oligodendrocyte | 2.85e-08 | 7 |
macroglial cell | 2.85e-08 | 7 |
astrocyte | 2.85e-08 | 7 |
oligodendrocyte precursor cell | 2.85e-08 | 7 |
embryonic stem cell | 1.57e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
kidney | 4.09e-08 | 26 |
kidney mesenchyme | 4.09e-08 | 26 |
upper urinary tract | 4.09e-08 | 26 |
kidney rudiment | 4.09e-08 | 26 |
kidney field | 4.09e-08 | 26 |
abdomen element | 1.07e-07 | 54 |
abdominal segment element | 1.07e-07 | 54 |
pigment epithelium of eye | 1.69e-07 | 11 |
abdominal segment of trunk | 8.22e-07 | 60 |
abdomen | 8.22e-07 | 60 |