FFCP PHASE1:Hg19::chr8:50823174..50823197,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54212 | |EntrezGene=54212 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13740 | |HGNC=13740 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-311bp_to_ENST00000520697_5end | |association_with_transcript=-311bp_to_ENST00000520697_5end | ||
|cluster_id=chr8:50823174..50823197,+ | |||
|coexpression_cluster_id=C35 | |||
|description=CAGE_peak_4_at_SNTG1_5end | |description=CAGE_peak_4_at_SNTG1_5end | ||
|id=chr8:50823174..50823197,+ | |id=chr8:50823174..50823197,+ | ||
|ontology_enrichment_celltype=CL:0000047!2.08e-09!8;CL:0000540!1.92e-08!6;CL:0000031!1.92e-08!6;CL:0000404!1.92e-08!6 | |ontology_enrichment_celltype=CL:0000047!2.08e-09!8;CL:0000540!1.92e-08!6;CL:0000031!1.92e-08!6;CL:0000404!1.92e-08!6 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0010122;1.94e-14;2!UBERON:0006601;2.98e-11;82!UBERON:0006222;7.03e-08;1 | |||
|ontology_enrichment_disease=DOID:171!2.75e-07!10 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002780!4.47e-69!41;UBERON:0001890!4.47e-69!41;UBERON:0006240!4.47e-69!41;UBERON:0001049!8.84e-69!57;UBERON:0005068!8.84e-69!57;UBERON:0006241!8.84e-69!57;UBERON:0007135!8.84e-69!57;UBERON:0001893!2.25e-68!34;UBERON:0002020!4.42e-68!34;UBERON:0003528!4.42e-68!34;UBERON:0001017!4.72e-68!82;UBERON:0001869!6.40e-68!32;UBERON:0003080!2.89e-67!42;UBERON:0000073!6.78e-66!94;UBERON:0001016!6.78e-66!94;UBERON:0002791!2.65e-65!33;UBERON:0005743!1.94e-64!86;UBERON:0002616!1.76e-62!59;UBERON:0000955!1.69e-54!69;UBERON:0006238!1.69e-54!69;UBERON:0002619!2.00e-53!22;UBERON:0002346!4.47e-53!90;UBERON:0003075!1.02e-47!86;UBERON:0007284!1.02e-47!86;UBERON:0001950!2.24e-47!20;UBERON:0000956!1.31e-46!25;UBERON:0000203!1.31e-46!25;UBERON:0003056!5.51e-44!61;UBERON:0000924!1.29e-37!173;UBERON:0006601!1.29e-37!173;UBERON:0007023!1.45e-35!115;UBERON:0004121!1.35e-33!169;UBERON:0000033!1.77e-28!123;UBERON:0000153!1.02e-26!129;UBERON:0007811!1.02e-26!129;UBERON:0002308!9.66e-23!9;UBERON:0000125!9.66e-23!9;UBERON:0000200!2.13e-20!6;UBERON:0002420!1.01e-17!9;UBERON:0007245!1.01e-17!9;UBERON:0010009!1.01e-17!9;UBERON:0010011!1.01e-17!9;UBERON:0000454!1.01e-17!9;UBERON:0009663!2.20e-17!7;UBERON:0001872!1.18e-16!5;UBERON:0000369!9.93e-15!4;UBERON:0002435!9.93e-15!4;UBERON:0000204!9.93e-15!4;UBERON:0010082!9.93e-15!4;UBERON:0001871!1.18e-14!7;UBERON:0000025!1.20e-14!194;UBERON:0005383!1.68e-11!3;UBERON:0005382!1.68e-11!3;UBERON:0002771!4.90e-11!3;UBERON:0000349!5.70e-11!5;UBERON:0004111!8.51e-11!241;UBERON:0002021!9.47e-11!5;UBERON:0000988!1.01e-09!3;UBERON:0000477!2.43e-08!286;UBERON:0001873!3.17e-08!2;UBERON:0010122!3.17e-08!2;UBERON:0001870!5.09e-08!2;UBERON:0001954!9.27e-08!2;UBERON:0003022!9.27e-08!2;UBERON:0002421!9.27e-08!2;UBERON:0002600!9.27e-08!2;UBERON:0000483!1.40e-07!309;UBERON:0000119!2.03e-07!312;UBERON:0001875!2.09e-07!2;UBERON:0006514!2.09e-07!2;UBERON:0000064!3.09e-07!219;UBERON:0002360!4.46e-07!2;UBERON:0002148!4.46e-07!2;UBERON:0009662!4.46e-07!2;UBERON:0000094!4.46e-07!2;UBERON:0007645!4.46e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;3.64e-100;32!UBERON:0001893;8.46e-94;34!UBERON:0002791;6.10e-93;32!UBERON:0003528;5.93e-86;34!UBERON:0002020;5.93e-86;34!UBERON:0002619;1.90e-84;22!UBERON:0000956;2.72e-74;25!UBERON:0000203;2.72e-74;25!UBERON:0002780;7.09e-74;41!UBERON:0001890;7.09e-74;41!UBERON:0001950;4.73e-73;20!UBERON:0000073;2.51e-44;53!UBERON:0002616;2.51e-44;53!UBERON:0000200;7.85e-38;6!UBERON:0009663;9.77e-33;7!UBERON:0000955;3.00e-31;68!UBERON:0001017;6.47e-31;75!UBERON:0001872;9.81e-31;5!UBERON:0000369;5.03e-27;4!UBERON:0002435;5.03e-27;4!UBERON:0000204;5.03e-27;4!UBERON:0002420;2.31e-25;9!UBERON:0000125;2.31e-25;9!UBERON:0007245;2.31e-25;9!UBERON:0002308;2.31e-25;9!UBERON:0010009;2.31e-25;9!UBERON:0010011;2.31e-25;9!UBERON:0000454;2.31e-25;9!UBERON:0001016;9.67e-22;83!UBERON:0005383;9.15e-21;3!UBERON:0005382;9.15e-21;3!UBERON:0001870;4.34e-20;3!UBERON:0001871;1.20e-14;6!UBERON:0001873;1.94e-14;2!UBERON:0002702;3.62e-14;2!UBERON:0002771;1.27e-13;2!UBERON:0001954;1.49e-13;2!UBERON:0003022;1.49e-13;2!UBERON:0002421;1.49e-13;2!UBERON:0002600;1.49e-13;2!UBERON:0001875;4.75e-13;2!UBERON:0006514;4.75e-13;2!UBERON:0000349;4.08e-12;5!UBERON:0002021;8.80e-12;5!UBERON:0007023;3.33e-11;114!UBERON:0011216;1.29e-09;132!UBERON:0001874;4.57e-08;1!UBERON:0001882;5.22e-08;1!UBERON:0005403;5.22e-08;1!UBERON:0002022;7.03e-08;1!UBERON:0002581;1.18e-07;1!UBERON:0002902;1.18e-07;1!UBERON:0009899;1.18e-07;1!UBERON:0007190;1.18e-07;1!UBERON:0003112;2.31e-07;1!UBERON:0011158;2.31e-07;1!UBERON:0003128;2.31e-07;1!UBERON:0001703;2.31e-07;1!UBERON:0002241;2.31e-07;1!UBERON:0010314;6.10e-07;132 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001869,2.23e-114,32;UBERON:0001893,1.40e-107,34;UBERON:0002791,4.39e-105,32;UBERON:0002780,2.61e-104,41;UBERON:0001890,2.61e-104,41;UBERON:0003080,2.61e-104,41;UBERON:0006240,2.61e-104,41;UBERON:0003528,8.02e-99,34;UBERON:0002020,8.02e-99,34;UBERON:0002619,2.34e-84,22;UBERON:0000073,4.62e-80,53;UBERON:0002616,4.62e-80,53;UBERON:0001049,1.36e-75,56;UBERON:0005068,1.36e-75,56;UBERON:0006241,1.36e-75,56;UBERON:0007135,1.36e-75,56;UBERON:0000956,3.26e-74,25;UBERON:0000203,3.26e-74,25;UBERON:0001950,5.63e-73,20;UBERON:0003056,4.18e-69,61;UBERON:0000955,2.01e-65,68;UBERON:0006238,2.01e-65,68;UBERON:0001017,4.63e-63,81;UBERON:0001016,2.14e-56,89;UBERON:0003075,2.22e-50,82;UBERON:0007284,2.22e-50,82;UBERON:0002346,7.74e-48,86;UBERON:0010371,8.74e-39,104;UBERON:0000200,4.88e-38,6;UBERON:0007023,3.28e-35,114;UBERON:0009663,1.44e-32,7;UBERON:0010314,4.59e-32,132;UBERON:0001872,9.24e-31,5;UBERON:0004121,2.24e-27,171;UBERON:0000924,2.24e-27,171;UBERON:0006601,2.24e-27,171;UBERON:0000369,5.04e-27,4;UBERON:0002435,5.04e-27,4;UBERON:0000204,5.04e-27,4;UBERON:0010082,5.04e-27,4;UBERON:0002420,3.11e-25,9;UBERON:0000125,3.11e-25,9;UBERON:0007245,3.11e-25,9;UBERON:0002308,3.11e-25,9;UBERON:0010009,3.11e-25,9;UBERON:0010011,3.11e-25,9;UBERON:0000454,3.11e-25,9;UBERON:0011216,2.15e-21,223;UBERON:0005383,9.16e-21,3;UBERON:0005382,9.16e-21,3;UBERON:0001870,3.36e-20,3;UBERON:0000025,8.68e-19,192;UBERON:0001871,1.20e-14,6;UBERON:0001873,1.95e-14,2;UBERON:0010122,1.95e-14,2;UBERON:0002702,3.50e-14,2;UBERON:0004111,5.13e-14,240;UBERON:0002771,1.05e-13,2;UBERON:0001954,1.54e-13,2;UBERON:0003022,1.54e-13,2;UBERON:0002421,1.54e-13,2;UBERON:0002600,1.54e-13,2;UBERON:0001875,7.33e-13,2;UBERON:0006514,7.33e-13,2;UBERON:0000349,4.17e-12,5;UBERON:0002021,1.10e-11,5;UBERON:0000483,7.05e-10,306;UBERON:0000119,9.88e-10,309;UBERON:0001874,4.57e-08,1;UBERON:0001882,5.22e-08,1;UBERON:0005403,5.22e-08,1;UBERON:0002022,8.28e-08,1;UBERON:0007190,8.84e-08,1;UBERON:0002581,1.22e-07,1;UBERON:0002902,1.30e-07,1;UBERON:0009899,1.30e-07,1;UBERON:0003112,1.69e-07,1;UBERON:0011158,1.69e-07,1;UBERON:0003128,1.69e-07,1;UBERON:0001703,1.69e-07,1;UBERON:0002241,1.69e-07,1;UBERON:0004761,1.69e-07,1;UBERON:0009617,1.69e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,3.09315525111078,0.167516265334349,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.562677665642051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.57705766875147,0,0,0,0,0,0,0,0,0,0,7.97167247232455,13.2656082487949,0,0,0.591095237907095,1.53569778007781,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.337005664903385,0,3.04543779442941,0,0,0,0.789168805698781,0,2.44858209304392,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,0,0,0,0,0,2.84898581801454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20084057741958,1.09524303113594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.18091875923721,1.22583065500418,0,0.137539436597234,0,0,0,3.03747783290123,0,0.236417121897595,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.646414781807753,0.26446520348538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.43034089983493,2.80660409274515,3.1297732676625,0,0,0.18628920882415,0,0,0,0,0,0,0.144921028610825,0,0,1.66441758450784,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.35039341457942,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0.107824811396682,0.629063767423586,0,0,0.637724760305049,0.371807292777007,0,0,0,0,0,0,6.03754715906719,0,1.27707087245721,2.05116364240755,0.756215088665154,2.21303207885497,1.77623210195036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.97165372320936,3.90539049306924,1.44680757550829,1.71222687523548,1.09394961803644,0,0,0.175871244359621,0,0,0,0,0.455324382702595,0,0,0,0.271878931907327,2.30204707469972,0,0,0,10.8409757042041,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.437119121007915,0,0,0,0,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0,0,2.03974470572744,0.872701380680755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.1720929130998,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,3.09315525111078,0.167516265334349,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.562677665642051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.57705766875147,0,0,0,0,0,0,0,0,0,0,7.97167247232455,13.2656082487949,0,0,0.591095237907095,1.53569778007781,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.337005664903385,0,3.04543779442941,0,0,0,0.789168805698781,0,2.44858209304392,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,0,0,0,0,0,2.84898581801454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20084057741958,1.09524303113594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.18091875923721,1.22583065500418,0,0.137539436597234,0,0,0,3.03747783290123,0,0.236417121897595,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.646414781807753,0.26446520348538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.43034089983493,2.80660409274515,3.1297732676625,0,0,0.18628920882415,0,0,0,0,0,0,0.144921028610825,0,0,1.66441758450784,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.35039341457942,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0.107824811396682,0.629063767423586,0,0,0.637724760305049,0.371807292777007,0,0,0,0,0,0,6.03754715906719,0,1.27707087245721,2.05116364240755,0.756215088665154,2.21303207885497,1.77623210195036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.97165372320936,3.90539049306924,1.44680757550829,1.71222687523548,1.09394961803644,0,0,0.175871244359621,0,0,0,0,0.455324382702595,0,0,0,0.271878931907327,2.30204707469972,0,0,0,10.8409757042041,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.437119121007915,0,0,0,0,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0,0,2.03974470572744,0.872701380680755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.1720929130998,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p4@SNTG1 | |short_description=p4@SNTG1 | ||
}} | }} |
Latest revision as of 10:44, 18 September 2015
Short description: | p4@SNTG1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SNTG1_5end |
Coexpression cluster: | C35_caudate_putamen_diencephalon_nucleus_globus_thalamus_insula |
Association with transcript: | -311bp_to_ENST00000520697_5end |
EntrezGene: | SNTG1 |
HGNC: | 13740 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data