FFCP PHASE1:Hg19::chr3:46205262..46205283,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=1232 | |EntrezGene=1232 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=1604 | |HGNC=1604 | ||
|TSSclassifier= | |TSSclassifier=strong | ||
|UniProt=P51677 | |UniProt=P51677 | ||
|association_with_transcript=166bp_to_ENST00000357422,uc003cpg.1_5end | |association_with_transcript=166bp_to_ENST00000357422,uc003cpg.1_5end | ||
|cluster_id=chr3:46205262..46205283,+ | |||
|coexpression_cluster_id=C125 | |coexpression_cluster_id=C125 | ||
|description=CAGE_peak_5_at_CCR3_5end | |description=CAGE_peak_5_at_CCR3_5end | ||
Latest revision as of 10:15, 18 September 2015
| Short description: | p5@CCR3 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_5_at_CCR3_5end |
| Coexpression cluster: | C125_mucinous_alveolar_mesothelioma_Smooth_lung_CD14_Nucleus |
| Association with transcript: | 166bp_to_ENST00000357422, uc003cpg.1_5end |
| EntrezGene: | CCR3 |
| HGNC: | 1604 |
| UniProt: | P51677 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p5@CCR3 |
|---|
0.0
2.5
5.0
7.5
10.0
12.5
15.0
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| seromucus secreting cell | 3.14e-28 | 2 |
| chorionic membrane mesenchymal stem cell | 2.32e-18 | 3 |
| mucus secreting cell | 4.73e-15 | 1 |
| serous secreting cell | 5.42e-15 | 1 |
| amnion mesenchymal stem cell | 1.35e-11 | 5 |
| extraembryonic cell | 2.25e-11 | 19 |
| epithelial cell of gall bladder | 4.09e-08 | 2 |
Showing 1 to 7 of 7 entries
| Ontology term | p-value | n |
|---|---|---|
| egg chorion | 2.32e-18 | 3 |
| extraembryonic membrane | 2.49e-15 | 14 |
| membranous layer | 2.49e-15 | 14 |
| epithelium of female gonad | 5.42e-15 | 1 |
| extraembryonic structure | 9.81e-14 | 24 |
| amnion | 1.53e-08 | 7 |
| chorion | 2.07e-08 | 7 |
| epithelium of gonad | 3.82e-08 | 2 |
| somatic layer of lateral plate mesoderm | 1.40e-07 | 8 |
| organ component layer | 7.16e-07 | 66 |
Showing 1 to 10 of 10 entries
| Ontology term | p-value | n |
|---|---|---|
| mucinous adenocarcinoma | 4.73e-15 | 1 |
| ovary epithelial cancer | 5.42e-15 | 1 |
| adenocarcinoma | 7.00e-09 | 25 |
Showing 1 to 3 of 3 entries
