FFCP PHASE1:Hg19::chr2:17773459..17773475,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7447 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=12722 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=117bp_to_AB528541,DQ890800,DQ893955_5end | |||
|cluster_id=chr2:17773459..17773475,+ | |||
|coexpression_cluster_id=C16 | |||
|description=CAGE_peak_5_at_VSNL1_5end | |||
|id=chr2:17773459..17773475,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000540;6.75e-09;6!CL:0000404;6.75e-09;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,6.31e-09,6;CL:0000031,6.31e-09,6;CL:0000404,6.31e-09,6;CL:0000047,8.31e-07,8 | |||
|ontology_enrichment_development_v019=UBERON:0006601;3.62e-15;82!CL:0000031;6.75e-09;6!UBERON:0006215;7.05e-09;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!3.95e-48!57;UBERON:0005068!3.95e-48!57;UBERON:0006241!3.95e-48!57;UBERON:0007135!3.95e-48!57;UBERON:0001017!2.03e-44!82;UBERON:0005743!9.26e-44!86;UBERON:0000073!2.92e-40!94;UBERON:0001016!2.92e-40!94;UBERON:0002616!2.08e-38!59;UBERON:0002780!1.73e-36!41;UBERON:0001890!1.73e-36!41;UBERON:0006240!1.73e-36!41;UBERON:0002020!2.17e-36!34;UBERON:0003528!2.17e-36!34;UBERON:0001893!4.18e-36!34;UBERON:0001869!5.68e-36!32;UBERON:0003080!1.97e-35!42;UBERON:0000955!2.87e-35!69;UBERON:0006238!2.87e-35!69;UBERON:0002791!4.09e-34!33;UBERON:0002619!1.05e-33!22;UBERON:0000033!1.43e-33!123;UBERON:0000956!2.84e-32!25;UBERON:0000203!2.84e-32!25;UBERON:0003075!1.06e-31!86;UBERON:0007284!1.06e-31!86;UBERON:0004121!1.81e-31!169;UBERON:0000153!2.38e-31!129;UBERON:0007811!2.38e-31!129;UBERON:0000924!2.26e-30!173;UBERON:0006601!2.26e-30!173;UBERON:0001950!7.11e-30!20;UBERON:0002346!9.02e-30!90;UBERON:0007023!2.42e-28!115;UBERON:0003056!1.46e-23!61;UBERON:0000200!8.93e-15!6;UBERON:0003076!1.98e-13!15;UBERON:0003057!1.98e-13!15;UBERON:0000349!1.32e-11!5;UBERON:0001871!1.86e-10!7;UBERON:0004111!1.94e-10!241;UBERON:0000025!6.91e-10!194;UBERON:0004733!1.26e-08!12;UBERON:0002028!1.26e-08!12;UBERON:0007277!1.26e-08!12;UBERON:0000477!1.62e-08!286;UBERON:0000475!1.90e-08!365;UBERON:0001872!2.90e-08!5;UBERON:0002021!3.06e-08!5;UBERON:0002771!3.19e-08!3;UBERON:0004732!7.27e-08!13;UBERON:0000988!1.07e-07!3;UBERON:0002240!2.46e-07!3;UBERON:0005174!2.98e-07!5;UBERON:0001137!2.98e-07!5;UBERON:0000922!3.78e-07!612;UBERON:0002298!6.48e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;2.64e-69;22!UBERON:0001950;1.36e-67;20!UBERON:0001869;1.19e-63;32!UBERON:0003528;2.79e-63;34!UBERON:0002020;2.79e-63;34!UBERON:0000956;6.79e-61;25!UBERON:0000203;6.79e-61;25!UBERON:0001893;3.16e-60;34!UBERON:0002791;4.04e-58;32!UBERON:0002780;1.08e-37;41!UBERON:0001890;1.08e-37;41!UBERON:0000073;9.64e-36;53!UBERON:0002616;9.64e-36;53!UBERON:0000200;3.42e-35;6!UBERON:0000955;6.76e-28;68!UBERON:0001017;2.83e-27;75!UBERON:0001872;3.04e-19;5!UBERON:0002021;5.08e-19;5!UBERON:0001870;1.13e-18;3!UBERON:0001016;4.31e-18;83!UBERON:0000988;2.89e-17;3!UBERON:0002680;1.07e-15;9!UBERON:0001895;1.07e-15;9!UBERON:0000125;1.76e-15;9!UBERON:0002308;1.76e-15;9!UBERON:0000369;2.23e-13;4!UBERON:0002435;2.23e-13;4!UBERON:0000204;2.23e-13;4!UBERON:0001871;2.82e-13;6!UBERON:0002702;3.09e-13;2!UBERON:0002771;9.26e-13;2!UBERON:0007023;2.15e-12;114!UBERON:0002148;4.29e-12;2!UBERON:0006331;4.29e-12;2!UBERON:0009662;4.29e-12;2!UBERON:0004733;1.00e-11;12!UBERON:0002028;1.00e-11;12!UBERON:0004732;8.31e-11;13!UBERON:0000349;1.41e-10;5!UBERON:0002420;3.07e-10;9!UBERON:0007245;3.07e-10;9!UBERON:0010009;3.07e-10;9!UBERON:0010011;3.07e-10;9!UBERON:0000454;3.07e-10;9!UBERON:0011216;1.21e-09;132!UBERON:0002298;6.75e-09;6!UBERON:0005383;1.31e-08;3!UBERON:0005382;1.31e-08;3!UBERON:0009663;7.50e-08;7!UBERON:0003112;2.10e-07;1!UBERON:0011158;2.10e-07;1!UBERON:0003128;2.10e-07;1!UBERON:0001703;2.10e-07;1!UBERON:0002241;2.10e-07;1!UBERON:0001874;2.84e-07;1!UBERON:0007190;2.84e-07;1!UBERON:0002581;3.71e-07;1!UBERON:0002902;7.08e-07;1!UBERON:0001882;7.08e-07;1!UBERON:0002022;7.08e-07;1!UBERON:0009899;7.08e-07;1!UBERON:0005403;7.08e-07;1 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.331397375727916,0,0,0,0,0,0,0,0,0.410623275218653,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.365921118388786,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0.277765335475589,0,0,0,0,0,0,0,0,0,0,0,0,0,0.93733833986777,0,0.283550194484773,0.0895585227028483,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0.27470839445503,0,0,0.650060246036521,0,0,0,0,0,0,0,0,0,0.165284915360978,0.576570202095319,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144269212976445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9882952955326,0.984685914873589,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.84666373047609,4.54563680993071,0,0,0,0,0.1137934482855,0,0,0,0,0,0,1.20596438625408,0,2.98564001814306,4.13766666534966,2.63262476584767,0,0.278847488557207,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0.937057782901357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195984794828755,0,0,0,0,0,0,0.193978032976839,0,0.451961481561065,0,0,2.72236422610278,0,0,0,0,0,0,0,0.14405479798815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157566364614447,0.659326867049332,0.404421263125109,0,0,0.795229689809303,1.0896272488926,1.28602518772015,1.78801267576404,1.66176135211674,0,0,1.88323625639876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0342636508924,1.05786081394152,0,0,0,0,0,0,0,0,0.638341257770182,0,0,0,0,0.157054096250234,8.86068179966986,88.1029632592174,4.13130071331449,0,0.665574309221114,0.434674820589684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7973596699725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218419276384028,0,0,0,0,0,0,0,0,0,1.28458450192919,18.420554922326,2.39450788585727,3.28186182785208,0,1.79808856406967,4.84426936895553,0,0.0981477185010256,0.235939446695481,0.366857197043358,0,0,0,0,0,0,0,0,0,0,3.17426647706455,4.68646859168308,4.54710952302605,2.34638497717455,0,0,0,0,0,0,0,0,0,0,0,0,1.90315252335129,2.23627430113687,0,0,0,3.14231179832004,0,0,0,0,0.142953088353313,0,0,0,0,0.207216164163037,0.6828739083758,0,0,0,0,0,0,0,0,0,0.098150233615243,0,0,0,0,0,0,0,0,0.90356865631168,0,0,0,0,0,0,0,1.76677620403451,0.297046400327086,0.8453114551668,0,0,0,0,0,0,0,0,0.458729283404541,0,0,1.22384682343646,0,0,0,0,0,0,0,0,0.101988829741982,0.26721740526556,0.0918948995348449,1.0028301571695,0,0,0.829169439458779,0.103432995861895,0,0,0,0,0.224263725161227,0,0,0.435433495793923,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p5@VSNL1 | |||
}} |
Latest revision as of 10:06, 18 September 2015
Short description: | p5@VSNL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_VSNL1_5end |
Coexpression cluster: | C16_medial_amygdala_occipital_parietal_olfactory_putamen_brain |
Association with transcript: | 117bp_to_AB528541, DQ890800, DQ893955_5end |
EntrezGene: | VSNL1 |
HGNC: | 12722 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 6.31e-09 | 6 |
neuroblast | 6.31e-09 | 6 |
electrically signaling cell | 6.31e-09 | 6 |
neuronal stem cell | 8.31e-07 | 8 |