FFCP PHASE1:Hg19::chr17:79918808..79918833,-: Difference between revisions
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|id=chr17:79918808..79918833,-
|short_description=p7@NOTUM
|description=CAGE_peak_7_at_NOTUM_5end
|association_with_transcript=-59bp_to_ENST00000489218_5end
|Entre...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=147111 | |EntrezGene=147111 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=27106 | |HGNC=27106 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-59bp_to_ENST00000489218_5end | |||
|cluster_id=chr17:79918808..79918833,- | |||
|coexpression_cluster_id=C50 | |||
|description=CAGE_peak_7_at_NOTUM_5end | |||
|id=chr17:79918808..79918833,- | |||
|ontology_enrichment_celltype=CL:0002541!3.94e-24!3;CL:1000415!1.93e-15!2 | |||
|ontology_enrichment_celltype_v019=CL:0002541;4.06e-99;3!CL:0000349;1.75e-16;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,4.06e-99,3;CL:0000349,1.75e-16,19 | |||
|ontology_enrichment_development_v019=UBERON:0003124;8.34e-34;1 | |||
|ontology_enrichment_disease=DOID:0050619!3.87e-09!1;DOID:1357!3.87e-09!1 | |||
|ontology_enrichment_disease_v019=DOID:0050619;5.05e-34;1!DOID:1357;5.05e-34;1!DOID:5409;1.63e-09;4!DOID:0050615;3.20e-09;16 | |||
|ontology_enrichment_disease_v019_2=DOID:0050619,5.05e-34,1;DOID:1357,5.05e-34,1;DOID:5409,1.70e-09,4;DOID:0050615,3.27e-09,16 | |||
|ontology_enrichment_uberon=UBERON:0000476!3.94e-24!3;UBERON:0000920!3.94e-24!3;UBERON:0003124!4.35e-18!7;UBERON:0005631!1.06e-13!14;UBERON:0000158!1.06e-13!14;UBERON:0002110!1.32e-10!3;UBERON:0006242!1.32e-10!3;UBERON:0009497!3.69e-10!25;UBERON:0000015!3.69e-10!25;UBERON:0002423!3.69e-10!25;UBERON:0006235!3.69e-10!25;UBERON:0004161!3.69e-10!25;UBERON:0001764!3.87e-09!1;UBERON:0001825!3.87e-09!1;UBERON:0000478!6.72e-08!24 | |||
|ontology_enrichment_uberon_v019=UBERON:0003124;4.06e-99;3!UBERON:0000920;4.06e-99;3!UBERON:0001764;5.05e-34;1!UBERON:0001825;5.05e-34;1!UBERON:0005631;1.68e-30;10!UBERON:0000158;1.68e-30;10!UBERON:0000478;1.42e-22;24!UBERON:0001987;1.63e-09;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,4.06e-99,3;UBERON:0003124,2.17e-75,7;UBERON:0005631,3.72e-38,14;UBERON:0000158,3.72e-38,14;UBERON:0001764,5.05e-34,1;UBERON:0001825,5.05e-34,1;UBERON:0000478,1.38e-22,24;UBERON:0001987,1.57e-09,4;UBERON:0004340,1.57e-09,4;UBERON:0004923,1.35e-08,66 | |||
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|short_description=p7@NOTUM | |||
}} | }} |
Latest revision as of 09:55, 18 September 2015
Short description: | p7@NOTUM |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_NOTUM_5end |
Coexpression cluster: | C50_chorionic_placenta_amniotic_migratory_smallcell_chronic_choriocarcinoma |
Association with transcript: | -59bp_to_ENST00000489218_5end |
EntrezGene: | NOTUM |
HGNC: | 27106 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 4.06e-99 | 3 |
extraembryonic cell | 1.75e-16 | 19 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 4.06e-99 | 3 |
chorion | 2.17e-75 | 7 |
extraembryonic membrane | 3.72e-38 | 14 |
membranous layer | 3.72e-38 | 14 |
maxillary sinus | 5.05e-34 | 1 |
paranasal sinus | 5.05e-34 | 1 |
extraembryonic structure | 1.38e-22 | 24 |
placenta | 1.57e-09 | 4 |
allantois | 1.57e-09 | 4 |
organ component layer | 1.35e-08 | 66 |
Ontology term | p-value | n |
---|---|---|
paranasal sinus cancer | 5.05e-34 | 1 |
maxillary sinus cancer | 5.05e-34 | 1 |
lung small cell carcinoma | 1.70e-09 | 4 |
respiratory system cancer | 3.27e-09 | 16 |