FFCP PHASE1:Hg19::chr2:73461410..73461463,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10574 | |EntrezGene=10574 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1622 | |HGNC=1622 | ||
|TSSclassifier=strong | |||
|UniProt=A8MWI8,F8WAM2,B8ZZC9,F8WBP8,F5GZK5,B7Z1C9 | |UniProt=A8MWI8,F8WAM2,B8ZZC9,F8WBP8,F5GZK5,B7Z1C9 | ||
|association_with_transcript=0bp_to_ENST00000398422,ENST00000399032,ENST00000409081,ENST00000409924,ENST00000464397,ENST00000473786,ENST00000480489,ENST00000537131,ENST00000538797_5end | |association_with_transcript=0bp_to_ENST00000398422,ENST00000399032,ENST00000409081,ENST00000409924,ENST00000464397,ENST00000473786,ENST00000480489,ENST00000537131,ENST00000538797_5end | ||
|cluster_id=chr2:73461410..73461463,+ | |||
|coexpression_cluster_id=C447 | |||
|description=CAGE_peak_1_at_CCT7_5end | |description=CAGE_peak_1_at_CCT7_5end | ||
|id=chr2:73461410..73461463,+ | |id=chr2:73461410..73461463,+ | ||
|ontology_enrichment_celltype=CL:0002321!5.55e-26!248;CL:0000220!2.41e-25!246;CL:0000548!5.14e-20!679;CL:0000004!5.14e-20!679;CL:0000255!5.14e-20!679;CL:0000012!1.75e-19!682;CL:0000222!2.54e-18!119;CL:0000066!3.58e-18!254;CL:0000055!3.61e-16!180;CL:0000183!5.72e-14!59;CL:0000393!5.35e-13!60;CL:0000211!5.35e-13!60;CL:0000144!2.19e-12!625;CL:0000680!4.62e-12!57;CL:0000056!4.62e-12!57;CL:0000355!4.62e-12!57;CL:0000187!5.51e-12!54;CL:0000192!6.64e-11!42;CL:0000514!6.64e-11!42;CL:0000359!5.21e-10!32;CL:0002371!9.67e-09!591;CL:0000003!4.58e-08!722;CL:0000115!3.78e-07!35;CL:0000213!4.78e-07!57;CL:0000215!4.78e-07!57;CL:0000076!6.73e-07!62;CL:0000071!9.30e-07!18;CL:0002546!9.30e-07!18 | |ontology_enrichment_celltype=CL:0002321!5.55e-26!248;CL:0000220!2.41e-25!246;CL:0000548!5.14e-20!679;CL:0000004!5.14e-20!679;CL:0000255!5.14e-20!679;CL:0000012!1.75e-19!682;CL:0000222!2.54e-18!119;CL:0000066!3.58e-18!254;CL:0000055!3.61e-16!180;CL:0000183!5.72e-14!59;CL:0000393!5.35e-13!60;CL:0000211!5.35e-13!60;CL:0000144!2.19e-12!625;CL:0000680!4.62e-12!57;CL:0000056!4.62e-12!57;CL:0000355!4.62e-12!57;CL:0000187!5.51e-12!54;CL:0000192!6.64e-11!42;CL:0000514!6.64e-11!42;CL:0000359!5.21e-10!32;CL:0002371!9.67e-09!591;CL:0000003!4.58e-08!722;CL:0000115!3.78e-07!35;CL:0000213!4.78e-07!57;CL:0000215!4.78e-07!57;CL:0000076!6.73e-07!62;CL:0000071!9.30e-07!18;CL:0002546!9.30e-07!18 | ||
|ontology_enrichment_celltype_v019=CL:0000359;1.93e-09;32!CL:0000192;8.85e-08;43!CL:1000449;2.98e-07;15!CL:0000187;4.03e-07;55!CL:0000071;9.38e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,2.91e-26,250;CL:0000222,1.60e-18,121;CL:0000066,2.38e-18,253;CL:0000393,1.26e-12,61;CL:0000211,1.26e-12,61;CL:0000680,1.07e-11,58;CL:0000056,1.07e-11,58;CL:0000355,1.07e-11,58;CL:0000187,1.31e-11,55;CL:0000192,1.73e-10,43;CL:0000514,1.73e-10,43;CL:0000359,5.21e-10,32;CL:0000115,1.23e-07,36;CL:0000213,1.84e-07,58;CL:0000215,1.84e-07,58;CL:1000449,2.94e-07,15;CL:0002078,5.61e-07,45;CL:0000076,9.15e-07,63;CL:0000071,9.30e-07,18;CL:0002546,9.30e-07,18 | |||
|ontology_enrichment_development_v019=CL:0000514;8.85e-08;43!CL:0002546;9.38e-07;18 | |||
|ontology_enrichment_disease=DOID:162!9.47e-13!235;DOID:14566!1.63e-12!239 | |ontology_enrichment_disease=DOID:162!9.47e-13!235;DOID:14566!1.63e-12!239 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:162,9.47e-13,235;DOID:14566,1.63e-12,239 | |||
|ontology_enrichment_uberon=UBERON:0003914!5.71e-17!118;UBERON:0002049!1.32e-15!79;UBERON:0007798!1.32e-15!79;UBERON:0003104!3.44e-15!238;UBERON:0009142!3.44e-15!238;UBERON:0000119!2.12e-14!312;UBERON:0004290!2.65e-14!70;UBERON:0005256!5.13e-14!143;UBERON:0000490!6.60e-14!138;UBERON:0000486!1.03e-13!82;UBERON:0000055!1.15e-13!69;UBERON:0001981!1.17e-13!60;UBERON:0007500!1.17e-13!60;UBERON:0004537!1.17e-13!60;UBERON:0006965!1.17e-13!60;UBERON:0000483!1.21e-13!309;UBERON:0000914!1.82e-13!83;UBERON:0002329!1.82e-13!83;UBERON:0003077!1.82e-13!83;UBERON:0003059!1.82e-13!83;UBERON:0007282!1.82e-13!83;UBERON:0009618!1.82e-13!83;UBERON:0007285!1.82e-13!83;UBERON:0002100!4.38e-13!216;UBERON:0004872!2.18e-12!84;UBERON:0001637!2.54e-12!42;UBERON:0003509!2.54e-12!42;UBERON:0004572!2.54e-12!42;UBERON:0001134!7.63e-12!61;UBERON:0002036!7.63e-12!61;UBERON:0003082!7.63e-12!61;UBERON:0002385!9.51e-11!63;UBERON:0001015!9.51e-11!63;UBERON:0000383!9.51e-11!63;UBERON:0000481!5.02e-10!347;UBERON:0001009!8.20e-10!113;UBERON:0004535!8.57e-10!110;UBERON:0004573!2.53e-08!33;UBERON:0004571!2.53e-08!33;UBERON:0000475!3.68e-08!365;UBERON:0000487!2.42e-07!22;UBERON:0001048!6.85e-07!168;UBERON:0001986!9.30e-07!18;UBERON:0004638!9.30e-07!18;UBERON:0004852!9.30e-07!18 | |||
|ontology_enrichment_uberon_v019=UBERON:0003914;5.32e-10;74!UBERON:0007500;4.39e-09;56!UBERON:0001981;4.39e-09;56!UBERON:0004537;4.39e-09;56!UBERON:0001637;4.85e-09;42!UBERON:0003509;4.85e-09;42!UBERON:0004572;4.85e-09;42!UBERON:0000490;7.56e-08;33!UBERON:0000025;1.11e-07;93!UBERON:0004573;1.49e-07;33!UBERON:0004571;1.49e-07;33!UBERON:0002049;2.42e-07;75!UBERON:0007798;2.42e-07;75!UBERON:0000487;2.47e-07;22!UBERON:0006555;2.98e-07;15!UBERON:0004819;2.98e-07;15!UBERON:0001285;2.98e-07;15!UBERON:0007684;2.98e-07;15!UBERON:0000055;3.27e-07;65!UBERON:0000353;4.76e-07;15!UBERON:0004638;9.38e-07;18!UBERON:0001986;9.38e-07;18!UBERON:0004852;9.38e-07;18 | |||
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| ||
|short_description=p1@CCT7 | |short_description=p1@CCT7 | ||
}} | }} |
Latest revision as of 09:17, 18 September 2015
Short description: | p1@CCT7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CCT7_5end |
Coexpression cluster: | C447_Alveolar_Bronchial_Smooth_Renal_Tracheal_Keratocytes_Hepatic |
Association with transcript: | 0bp_to_ENST00000398422, ENST00000399032, ENST00000409081, ENST00000409924, ENST00000464397, ENST00000473786, ENST00000480489, ENST00000537131, ENST00000538797_5end |
EntrezGene: | CCT7 |
HGNC: | 1622 |
UniProt: | A8MWI8F8WAM2B8ZZC9F8WBP8F5GZK5B7Z1C9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 2.91e-26 | 250 |
mesodermal cell | 1.60e-18 | 121 |
epithelial cell | 2.38e-18 | 253 |
electrically responsive cell | 1.26e-12 | 61 |
electrically active cell | 1.26e-12 | 61 |
muscle precursor cell | 1.07e-11 | 58 |
myoblast | 1.07e-11 | 58 |
multi-potent skeletal muscle stem cell | 1.07e-11 | 58 |
muscle cell | 1.31e-11 | 55 |
smooth muscle cell | 1.73e-10 | 43 |
smooth muscle myoblast | 1.73e-10 | 43 |
vascular associated smooth muscle cell | 5.21e-10 | 32 |
endothelial cell | 1.23e-07 | 36 |
lining cell | 1.84e-07 | 58 |
barrier cell | 1.84e-07 | 58 |
epithelial cell of nephron | 2.94e-07 | 15 |
meso-epithelial cell | 5.61e-07 | 45 |
squamous epithelial cell | 9.15e-07 | 63 |
blood vessel endothelial cell | 9.30e-07 | 18 |
embryonic blood vessel endothelial progenitor cell | 9.30e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
cancer | 9.47e-13 | 235 |
disease of cellular proliferation | 1.63e-12 | 239 |