FFCP PHASE1:Hg19::chr2:72375473..72375477,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=56603 | |EntrezGene=56603 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20581 | |HGNC=20581 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NR63 | |UniProt=Q9NR63 | ||
|association_with_transcript=-306bp_to_ENST00000001146_5end | |association_with_transcript=-306bp_to_ENST00000001146_5end | ||
|cluster_id=chr2:72375473..72375477,- | |||
|coexpression_cluster_id=C68 | |coexpression_cluster_id=C68 | ||
|description=CAGE_peak_3_at_CYP26B1_5end | |description=CAGE_peak_3_at_CYP26B1_5end | ||
|id=chr2:72375473..72375477,- | |id=chr2:72375473..72375477,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002537;5.19e-13;5!CL:0000349;2.79e-12;19!CL:0000746;5.48e-10;3!CL:0002541;5.72e-10;3!CL:0000737;1.07e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002537,5.21e-13,5;CL:0000349,3.06e-12,19;CL:0000746,5.02e-10,3;CL:0000513,5.02e-10,3;CL:0002541,5.74e-10,3;CL:0000737,1.01e-07,4 | |||
|ontology_enrichment_development_v019=CL:0000513;5.48e-10;3!UBERON:0010115;1.07e-07;1!UBERON:0005425;1.07e-07;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:171;2.22e-10;10 | |||
|ontology_enrichment_disease_v019_2=DOID:171,2.59e-10,10 | |||
|ontology_enrichment_uberon=UBERON:0007023!2.23e-19!115;UBERON:0004923!1.00e-12!57;UBERON:0000924!1.48e-11!173;UBERON:0006601!1.48e-11!173;UBERON:0004121!8.48e-11!169;UBERON:0005631!9.00e-11!14;UBERON:0000158!9.00e-11!14;UBERON:0000064!1.33e-09!219;UBERON:0002346!1.98e-09!90;UBERON:0000153!1.17e-08!129;UBERON:0007811!1.17e-08!129;UBERON:0003075!1.21e-08!86;UBERON:0007284!1.21e-08!86;UBERON:0002616!4.56e-08!59;UBERON:0000073!4.60e-08!94;UBERON:0001016!4.60e-08!94;UBERON:0000033!8.03e-08!123;UBERON:0001049!1.14e-07!57;UBERON:0005068!1.14e-07!57;UBERON:0006241!1.14e-07!57;UBERON:0007135!1.14e-07!57;UBERON:0000955!1.53e-07!69;UBERON:0006238!1.53e-07!69;UBERON:0001017!4.42e-07!82;UBERON:0005743!5.14e-07!86;UBERON:0000478!6.38e-07!24;UBERON:0003124!6.84e-07!7 | |ontology_enrichment_uberon=UBERON:0007023!2.23e-19!115;UBERON:0004923!1.00e-12!57;UBERON:0000924!1.48e-11!173;UBERON:0006601!1.48e-11!173;UBERON:0004121!8.48e-11!169;UBERON:0005631!9.00e-11!14;UBERON:0000158!9.00e-11!14;UBERON:0000064!1.33e-09!219;UBERON:0002346!1.98e-09!90;UBERON:0000153!1.17e-08!129;UBERON:0007811!1.17e-08!129;UBERON:0003075!1.21e-08!86;UBERON:0007284!1.21e-08!86;UBERON:0002616!4.56e-08!59;UBERON:0000073!4.60e-08!94;UBERON:0001016!4.60e-08!94;UBERON:0000033!8.03e-08!123;UBERON:0001049!1.14e-07!57;UBERON:0005068!1.14e-07!57;UBERON:0006241!1.14e-07!57;UBERON:0007135!1.14e-07!57;UBERON:0000955!1.53e-07!69;UBERON:0006238!1.53e-07!69;UBERON:0001017!4.42e-07!82;UBERON:0005743!5.14e-07!86;UBERON:0000478!6.38e-07!24;UBERON:0003124!6.84e-07!7 | ||
|ontology_enrichment_uberon_v019=UBERON:0005631;6.08e-17;10!UBERON:0000158;6.08e-17;10!UBERON:0003714;1.04e-13;2!UBERON:0003124;5.72e-10;3!UBERON:0000920;5.72e-10;3!UBERON:0000478;1.33e-09;24!UBERON:0000305;1.99e-09;7!UBERON:0002363;1.07e-07;1!UBERON:0002134;1.07e-07;1!UBERON:0000941;1.07e-07;1!UBERON:0001785;1.07e-07;1!UBERON:0002464;1.07e-07;1!UBERON:0004904;1.07e-07;1!UBERON:0001021;1.07e-07;1!UBERON:0005208;1.07e-07;1!UBERON:0004145;1.07e-07;1!UBERON:0005946;1.07e-07;1!UBERON:0005965;1.07e-07;1!UBERON:0002078;1.07e-07;1!UBERON:0002346;2.75e-07;4!UBERON:0000923;2.75e-07;4!UBERON:0010316;2.75e-07;4!UBERON:0005291;2.75e-07;4!UBERON:0000010;6.75e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,8.30e-17,14;UBERON:0000158,8.30e-17,14;UBERON:0003714,1.27e-13,2;UBERON:0004923,4.50e-10,66;UBERON:0000920,5.74e-10,3;UBERON:0000478,1.43e-09,24;UBERON:0000305,2.00e-09,7;UBERON:0003124,5.13e-09,7;UBERON:0004871,2.66e-08,8;UBERON:0002134,8.51e-08,1;UBERON:0005208,8.51e-08,1;UBERON:0005946,8.51e-08,1;UBERON:0005965,8.51e-08,1;UBERON:0002078,8.51e-08,1;UBERON:0000941,9.10e-08,1;UBERON:0001785,9.10e-08,1;UBERON:0002464,9.10e-08,1;UBERON:0004904,9.10e-08,1;UBERON:0001021,9.10e-08,1;UBERON:0003902,9.10e-08,1;UBERON:0005425,9.10e-08,1;UBERON:0002363,1.26e-07,1;UBERON:0007645,1.26e-07,1;UBERON:0007647,1.26e-07,1;UBERON:0010115,1.26e-07,1;UBERON:0000010,8.21e-07,8 | |||
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| ||
|short_description=p3@CYP26B1 | |short_description=p3@CYP26B1 | ||
}} | }} |
Latest revision as of 08:26, 18 September 2015
Short description: | p3@CYP26B1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CYP26B1_5end |
Coexpression cluster: | C68_amniotic_chorionic_Placental_salivary_placenta_tongue_mesothelioma |
Association with transcript: | -306bp_to_ENST00000001146_5end |
EntrezGene: | CYP26B1 |
HGNC: | 20581 |
UniProt: | Q9NR63 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
amnion mesenchymal stem cell | 5.21e-13 | 5 |
extraembryonic cell | 3.06e-12 | 19 |
cardiac muscle cell | 5.02e-10 | 3 |
cardiac muscle myoblast | 5.02e-10 | 3 |
chorionic membrane mesenchymal stem cell | 5.74e-10 | 3 |
striated muscle cell | 1.01e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 8.30e-17 | 14 |
membranous layer | 8.30e-17 | 14 |
neural tissue | 1.27e-13 | 2 |
organ component layer | 4.50e-10 | 66 |
egg chorion | 5.74e-10 | 3 |
extraembryonic structure | 1.43e-09 | 24 |
amnion | 2.00e-09 | 7 |
chorion | 5.13e-09 | 7 |
somatic layer of lateral plate mesoderm | 2.66e-08 | 8 |
tricuspid valve | 8.51e-08 | 1 |
right atrium valve | 8.51e-08 | 1 |
outflow tract of atrium | 8.51e-08 | 1 |
outflow part of right atrium | 8.51e-08 | 1 |
right cardiac atrium | 8.51e-08 | 1 |
cranial nerve II | 9.10e-08 | 1 |
cranial nerve | 9.10e-08 | 1 |
nerve trunk | 9.10e-08 | 1 |
nerve connecting eye with brain | 9.10e-08 | 1 |
nerve | 9.10e-08 | 1 |
retinal neural layer | 9.10e-08 | 1 |
presumptive neural retina | 9.10e-08 | 1 |
dura mater | 1.26e-07 | 1 |
future meninx | 1.26e-07 | 1 |
ectomeninx | 1.26e-07 | 1 |
future dura mater | 1.26e-07 | 1 |
peripheral nervous system | 8.21e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 2.59e-10 | 10 |