FFCP PHASE1:Hg19::chr13:99668435..99668444,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23348 | |EntrezGene=23348 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14132 | |HGNC=14132 | ||
|TSSclassifier=strong | |||
|UniProt=Q6ZSL5 | |UniProt=Q6ZSL5 | ||
|association_with_transcript=-462bp_to_ENST00000448493,uc001vnv.1_5end | |association_with_transcript=-462bp_to_ENST00000448493,uc001vnv.1_5end | ||
|cluster_id=chr13:99668435..99668444,- | |||
|coexpression_cluster_id=C10 | |||
|description=CAGE_peak_33_at_DOCK9_5end | |description=CAGE_peak_33_at_DOCK9_5end | ||
|id=chr13:99668435..99668444,- | |id=chr13:99668435..99668444,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001869!7.96e-55!32;UBERON:0002619!8.10e-53!22;UBERON:0001893!1.58e-51!34;UBERON:0002791!1.06e-46!33;UBERON:0000956!1.85e-46!25;UBERON:0000203!1.85e-46!25;UBERON:0002020!2.74e-45!34;UBERON:0003528!2.74e-45!34;UBERON:0001049!1.04e-42!57;UBERON:0005068!1.04e-42!57;UBERON:0006241!1.04e-42!57;UBERON:0007135!1.04e-42!57;UBERON:0002780!1.87e-42!41;UBERON:0001890!1.87e-42!41;UBERON:0006240!1.87e-42!41;UBERON:0003080!2.12e-41!42;UBERON:0001950!2.61e-41!20;UBERON:0002616!3.58e-41!59;UBERON:0000955!2.92e-34!69;UBERON:0006238!2.92e-34!69;UBERON:0001017!9.86e-32!82;UBERON:0005743!3.98e-30!86;UBERON:0003056!8.32e-28!61;UBERON:0003075!2.54e-27!86;UBERON:0007284!2.54e-27!86;UBERON:0000073!5.39e-27!94;UBERON:0001016!5.39e-27!94;UBERON:0002346!5.74e-26!90;UBERON:0000349!1.83e-24!5;UBERON:0000153!3.41e-21!129;UBERON:0007811!3.41e-21!129;UBERON:0000033!6.02e-18!123;UBERON:0001954!2.53e-16!2;UBERON:0003022!2.53e-16!2;UBERON:0002421!2.53e-16!2;UBERON:0002600!2.53e-16!2;UBERON:0001871!2.77e-15!7;UBERON:0007023!2.86e-15!115;UBERON:0002021!4.37e-14!5;UBERON:0004121!1.29e-13!169;UBERON:0000924!3.19e-13!173;UBERON:0006601!3.19e-13!173;UBERON:0000064!2.07e-12!219;UBERON:0000200!2.05e-11!6;UBERON:0000025!3.18e-10!194;UBERON:0002022!4.89e-09!1;UBERON:0001874!9.74e-09!1;UBERON:0002581!1.22e-08!1;UBERON:0001882!1.32e-08!1;UBERON:0005403!1.32e-08!1;UBERON:0000477!1.44e-08!286;UBERON:0002902!1.53e-08!1;UBERON:0009899!1.53e-08!1;UBERON:0007190!1.78e-08!1;UBERON:0000369!2.88e-08!4;UBERON:0002435!2.88e-08!4;UBERON:0000204!2.88e-08!4;UBERON:0010082!2.88e-08!4;UBERON:0002370!3.10e-08!4;UBERON:0005058!3.10e-08!4;UBERON:0009113!3.10e-08!4;UBERON:0003295!3.10e-08!4;UBERON:0005562!3.10e-08!4;UBERON:0002420!5.14e-08!9;UBERON:0007245!5.14e-08!9;UBERON:0010009!5.14e-08!9;UBERON:0010011!5.14e-08!9;UBERON:0000454!5.14e-08!9;UBERON:0004111!1.53e-07!241;UBERON:0001872!6.08e-07!5 | |ontology_enrichment_uberon=UBERON:0001869!7.96e-55!32;UBERON:0002619!8.10e-53!22;UBERON:0001893!1.58e-51!34;UBERON:0002791!1.06e-46!33;UBERON:0000956!1.85e-46!25;UBERON:0000203!1.85e-46!25;UBERON:0002020!2.74e-45!34;UBERON:0003528!2.74e-45!34;UBERON:0001049!1.04e-42!57;UBERON:0005068!1.04e-42!57;UBERON:0006241!1.04e-42!57;UBERON:0007135!1.04e-42!57;UBERON:0002780!1.87e-42!41;UBERON:0001890!1.87e-42!41;UBERON:0006240!1.87e-42!41;UBERON:0003080!2.12e-41!42;UBERON:0001950!2.61e-41!20;UBERON:0002616!3.58e-41!59;UBERON:0000955!2.92e-34!69;UBERON:0006238!2.92e-34!69;UBERON:0001017!9.86e-32!82;UBERON:0005743!3.98e-30!86;UBERON:0003056!8.32e-28!61;UBERON:0003075!2.54e-27!86;UBERON:0007284!2.54e-27!86;UBERON:0000073!5.39e-27!94;UBERON:0001016!5.39e-27!94;UBERON:0002346!5.74e-26!90;UBERON:0000349!1.83e-24!5;UBERON:0000153!3.41e-21!129;UBERON:0007811!3.41e-21!129;UBERON:0000033!6.02e-18!123;UBERON:0001954!2.53e-16!2;UBERON:0003022!2.53e-16!2;UBERON:0002421!2.53e-16!2;UBERON:0002600!2.53e-16!2;UBERON:0001871!2.77e-15!7;UBERON:0007023!2.86e-15!115;UBERON:0002021!4.37e-14!5;UBERON:0004121!1.29e-13!169;UBERON:0000924!3.19e-13!173;UBERON:0006601!3.19e-13!173;UBERON:0000064!2.07e-12!219;UBERON:0000200!2.05e-11!6;UBERON:0000025!3.18e-10!194;UBERON:0002022!4.89e-09!1;UBERON:0001874!9.74e-09!1;UBERON:0002581!1.22e-08!1;UBERON:0001882!1.32e-08!1;UBERON:0005403!1.32e-08!1;UBERON:0000477!1.44e-08!286;UBERON:0002902!1.53e-08!1;UBERON:0009899!1.53e-08!1;UBERON:0007190!1.78e-08!1;UBERON:0000369!2.88e-08!4;UBERON:0002435!2.88e-08!4;UBERON:0000204!2.88e-08!4;UBERON:0010082!2.88e-08!4;UBERON:0002370!3.10e-08!4;UBERON:0005058!3.10e-08!4;UBERON:0009113!3.10e-08!4;UBERON:0003295!3.10e-08!4;UBERON:0005562!3.10e-08!4;UBERON:0002420!5.14e-08!9;UBERON:0007245!5.14e-08!9;UBERON:0010009!5.14e-08!9;UBERON:0010011!5.14e-08!9;UBERON:0000454!5.14e-08!9;UBERON:0004111!1.53e-07!241;UBERON:0001872!6.08e-07!5 | ||
|ontology_enrichment_uberon_v019=UBERON:0001950;4.59e-22;20!UBERON:0002619;3.07e-20;22!UBERON:0000922;1.65e-18;49!UBERON:0000956;5.04e-18;25!UBERON:0000203;5.04e-18;25!UBERON:0002114;1.03e-17;2!UBERON:0002791;1.18e-13;32!UBERON:0001869;2.49e-13;32!UBERON:0003528;7.66e-13;34!UBERON:0002020;7.66e-13;34!UBERON:0002021;2.66e-11;5!UBERON:0002108;3.42e-11;4!UBERON:0001872;3.42e-11;5!UBERON:0001893;6.77e-11;34!UBERON:0002780;9.66e-11;41!UBERON:0001890;9.66e-11;41!UBERON:0001871;2.03e-08;6!UBERON:0000073;1.69e-07;53!UBERON:0002616;1.69e-07;53 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001950,4.76e-22,20;UBERON:0002619,3.18e-20,22;UBERON:0000956,5.19e-18,25;UBERON:0000203,5.19e-18,25;UBERON:0002114,9.46e-18,2;UBERON:0002791,2.11e-14,32;UBERON:0001869,2.11e-14,32;UBERON:0003528,1.23e-13,34;UBERON:0002020,1.23e-13,34;UBERON:0001893,1.23e-13,34;UBERON:0002780,1.61e-11,41;UBERON:0001890,1.61e-11,41;UBERON:0003080,1.61e-11,41;UBERON:0006240,1.61e-11,41;UBERON:0002021,2.66e-11,5;UBERON:0002108,3.26e-11,4;UBERON:0001872,3.60e-11,5;UBERON:0000073,3.71e-09,53;UBERON:0002616,3.71e-09,53;UBERON:0001049,1.02e-08,56;UBERON:0005068,1.02e-08,56;UBERON:0006241,1.02e-08,56;UBERON:0007135,1.02e-08,56;UBERON:0001871,2.03e-08,6;UBERON:0003056,4.39e-08,61;UBERON:0000955,2.97e-07,68;UBERON:0006238,2.97e-07,68 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168584690078102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0,0,0,0.211125408127993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295547618953547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.44858209304392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253243183823515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,0.272406812223151,0,0,0,0,0,0.364497339948148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128458450192919,0,0.159633859057151,0,4.28521883576921,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0,1.64092442705466,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0.131545547125698,0,0,0,0.157115589916002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135982980381829,1.74540276136151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0.186224142887574,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168584690078102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0,0,0,0.211125408127993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295547618953547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.44858209304392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253243183823515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,0.272406812223151,0,0,0,0,0,0.364497339948148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128458450192919,0,0.159633859057151,0,4.28521883576921,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0,1.64092442705466,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0.131545547125698,0,0,0,0.157115589916002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135982980381829,1.74540276136151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0.186224142887574,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p33@DOCK9 | |short_description=p33@DOCK9 | ||
}} | }} |
Latest revision as of 08:11, 18 September 2015
Short description: | p33@DOCK9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_33_at_DOCK9_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | -462bp_to_ENST00000448493, uc001vnv.1_5end |
EntrezGene: | DOCK9 |
HGNC: | 14132 |
UniProt: | Q6ZSL5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neocortex | 4.76e-22 | 20 |
regional part of cerebral cortex | 3.18e-20 | 22 |
cerebral cortex | 5.19e-18 | 25 |
pallium | 5.19e-18 | 25 |
duodenum | 9.46e-18 | 2 |
regional part of telencephalon | 2.11e-14 | 32 |
cerebral hemisphere | 2.11e-14 | 32 |
brain grey matter | 1.23e-13 | 34 |
gray matter | 1.23e-13 | 34 |
telencephalon | 1.23e-13 | 34 |
regional part of forebrain | 1.61e-11 | 41 |
forebrain | 1.61e-11 | 41 |
anterior neural tube | 1.61e-11 | 41 |
future forebrain | 1.61e-11 | 41 |
occipital lobe | 2.66e-11 | 5 |
small intestine | 3.26e-11 | 4 |
parietal lobe | 3.60e-11 | 5 |
regional part of nervous system | 3.71e-09 | 53 |
regional part of brain | 3.71e-09 | 53 |
neural tube | 1.02e-08 | 56 |
neural rod | 1.02e-08 | 56 |
future spinal cord | 1.02e-08 | 56 |
neural keel | 1.02e-08 | 56 |
temporal lobe | 2.03e-08 | 6 |
pre-chordal neural plate | 4.39e-08 | 61 |
brain | 2.97e-07 | 68 |
future brain | 2.97e-07 | 68 |