FFCP PHASE1:Hg19::chr3:42917432..42917446,-: Difference between revisions
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|id=chr3:42917432..42917446,-
|short_description=p3@CYP8B1
|description=CAGE_peak_3_at_CYP8B1_5end
|association_with_transcript=-42bp_to_ENST00000437102,uc010hif.2_...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1582 | |EntrezGene=1582 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2653 | |HGNC=2653 | ||
|TSSclassifier=strong | |||
|UniProt=C9JFR9 | |UniProt=C9JFR9 | ||
|association_with_transcript=-42bp_to_ENST00000437102,uc010hif.2_5end | |||
|cluster_id=chr3:42917432..42917446,- | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_3_at_CYP8B1_5end | |||
|id=chr3:42917432..42917446,- | |||
|ontology_enrichment_celltype=CL:0000181!2.39e-31!12;CL:0000417!2.39e-31!12;CL:0000668!2.39e-31!12;CL:0000414!2.39e-31!12;CL:0000412!2.39e-31!12;CL:0000182!2.39e-31!12;CL:0000223!4.28e-08!59 | |||
|ontology_enrichment_celltype_v019=CL:0000182;2.12e-19;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.12e-19,12 | |||
|ontology_enrichment_development_v019=UBERON:0004161;5.29e-10;11!UBERON:0009497;1.31e-08;13!UBERON:0003104;4.43e-08;31 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!8.35e-35!19;UBERON:0006925!8.35e-35!19;UBERON:0008836!8.35e-35!19;UBERON:0005057!8.86e-32!26;UBERON:0008835!5.94e-30!22;UBERON:0003894!5.94e-30!22;UBERON:0009854!1.29e-28!23;UBERON:0007499!2.92e-26!25;UBERON:0009497!2.92e-26!25;UBERON:0000015!2.92e-26!25;UBERON:0002423!2.92e-26!25;UBERON:0006235!2.92e-26!25;UBERON:0004161!2.92e-26!25;UBERON:0005172!8.31e-26!55;UBERON:0005173!8.31e-26!55;UBERON:0009856!3.21e-25!26;UBERON:0002417!4.19e-23!61;UBERON:0000916!4.19e-23!61;UBERON:0002365!5.12e-21!31;UBERON:0002330!5.12e-21!31;UBERON:0002368!1.62e-18!35;UBERON:0003929!1.01e-14!54;UBERON:0000949!3.33e-14!45;UBERON:0005177!2.01e-12!107;UBERON:0001301!6.97e-12!1;UBERON:0009569!1.14e-11!113;UBERON:0002530!1.30e-10!59;UBERON:0005911!2.70e-09!82;UBERON:0000466!1.55e-08!126;UBERON:0004921!3.32e-08!129;UBERON:0004185!3.32e-08!129;UBERON:0001041!1.37e-07!98 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;7.55e-33;19!UBERON:0006925;7.55e-33;19!UBERON:0002423;4.50e-25;25!UBERON:0002365;3.04e-20;31!UBERON:0002330;3.04e-20;31!UBERON:0002368;1.68e-17;33!UBERON:0005172;3.12e-13;52!UBERON:0005173;3.12e-13;52!UBERON:0000949;1.01e-12;43!UBERON:0002417;1.76e-08;58!UBERON:0000916;1.76e-08;58!UBERON:0002530;9.53e-07;57 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,7.55e-33,19;UBERON:0006925,7.55e-33,19;UBERON:0008836,7.55e-33,19;UBERON:0008835,1.97e-28,22;UBERON:0003894,1.97e-28,22;UBERON:0009854,3.24e-27,23;UBERON:0007499,4.50e-25,25;UBERON:0009497,4.50e-25,25;UBERON:0000015,4.50e-25,25;UBERON:0002423,4.50e-25,25;UBERON:0006235,4.50e-25,25;UBERON:0004161,4.50e-25,25;UBERON:0009856,4.00e-24,26;UBERON:0002365,2.69e-20,31;UBERON:0002330,2.69e-20,31;UBERON:0002368,5.10e-18,35;UBERON:0005172,1.21e-16,54;UBERON:0005173,1.21e-16,54;UBERON:0002417,5.37e-15,60;UBERON:0000916,5.37e-15,60;UBERON:0000949,4.38e-14,45;UBERON:0003929,8.79e-12,54;UBERON:0002530,8.36e-11,59;UBERON:0005177,6.05e-09,101;UBERON:0009569,4.56e-08,112;UBERON:0005911,7.94e-08,82;UBERON:0001041,2.20e-07,87 | |||
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|short_description=p3@CYP8B1 | |||
}} | }} |
Latest revision as of 07:15, 18 September 2015
Short description: | p3@CYP8B1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CYP8B1_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | -42bp_to_ENST00000437102, uc010hif.2_5end |
EntrezGene: | CYP8B1 |
HGNC: | 2653 |
UniProt: | C9JFR9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.12e-19 | 12 |
Ontology term | p-value | n |
---|---|---|
liver | 7.55e-33 | 19 |
digestive gland | 7.55e-33 | 19 |
liver bud | 7.55e-33 | 19 |
hepatic diverticulum | 1.97e-28 | 22 |
liver primordium | 1.97e-28 | 22 |
digestive tract diverticulum | 3.24e-27 | 23 |
epithelial sac | 4.50e-25 | 25 |
epithelium of foregut-midgut junction | 4.50e-25 | 25 |
anatomical boundary | 4.50e-25 | 25 |
hepatobiliary system | 4.50e-25 | 25 |
foregut-midgut junction | 4.50e-25 | 25 |
septum transversum | 4.50e-25 | 25 |
sac | 4.00e-24 | 26 |
exocrine gland | 2.69e-20 | 31 |
exocrine system | 2.69e-20 | 31 |
endocrine gland | 5.10e-18 | 35 |
abdomen element | 1.21e-16 | 54 |
abdominal segment element | 1.21e-16 | 54 |
abdominal segment of trunk | 5.37e-15 | 60 |
abdomen | 5.37e-15 | 60 |
endocrine system | 4.38e-14 | 45 |
gut epithelium | 8.79e-12 | 54 |
gland | 8.36e-11 | 59 |
trunk region element | 6.05e-09 | 101 |
subdivision of trunk | 4.56e-08 | 112 |
endo-epithelium | 7.94e-08 | 82 |
foregut | 2.20e-07 | 87 |