FFCP PHASE1:Hg19::chr2:1748343..1748352,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7837 | |EntrezGene=7837 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14966 | |HGNC=14966 | ||
|TSSclassifier=strong | |||
|UniProt=Q92626 | |UniProt=Q92626 | ||
|association_with_transcript=-52bp_to_NM_012293,uc002qxa.2,uc002qxb.1,uc002qxc.1_5end | |association_with_transcript=-52bp_to_NM_012293,uc002qxa.2,uc002qxb.1,uc002qxc.1_5end | ||
|cluster_id=chr2:1748343..1748352,- | |||
|coexpression_cluster_id=C4144 | |coexpression_cluster_id=C4144 | ||
|description=CAGE_peak_3_at_PXDN_5end | |description=CAGE_peak_3_at_PXDN_5end | ||
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|ontology_enrichment_celltype=CL:0000222!4.04e-29!119;CL:0000055!7.34e-28!180;CL:0002321!3.21e-23!248;CL:0000220!1.66e-22!246;CL:0000183!2.54e-16!59;CL:0000680!3.53e-15!57;CL:0000056!3.53e-15!57;CL:0000355!3.53e-15!57;CL:0000187!5.14e-14!54;CL:0000393!1.22e-13!60;CL:0000211!1.22e-13!60;CL:0002078!2.59e-13!44;CL:0000192!4.62e-13!42;CL:0000514!4.62e-13!42;CL:0000213!5.28e-13!57;CL:0000215!5.28e-13!57;CL:0000115!1.28e-12!35;CL:0000057!6.84e-12!75;CL:0000144!9.90e-12!625;CL:0002139!9.96e-12!24;CL:0000359!4.51e-11!32;CL:0000548!7.86e-10!679;CL:0000004!7.86e-10!679;CL:0000255!7.86e-10!679;CL:0000012!1.35e-09!682;CL:0002371!2.99e-09!591;CL:1000449!3.19e-08!16;CL:0000071!5.16e-08!18;CL:0002546!5.16e-08!18;CL:0002681!2.97e-07!13;CL:0002584!2.97e-07!13 | |ontology_enrichment_celltype=CL:0000222!4.04e-29!119;CL:0000055!7.34e-28!180;CL:0002321!3.21e-23!248;CL:0000220!1.66e-22!246;CL:0000183!2.54e-16!59;CL:0000680!3.53e-15!57;CL:0000056!3.53e-15!57;CL:0000355!3.53e-15!57;CL:0000187!5.14e-14!54;CL:0000393!1.22e-13!60;CL:0000211!1.22e-13!60;CL:0002078!2.59e-13!44;CL:0000192!4.62e-13!42;CL:0000514!4.62e-13!42;CL:0000213!5.28e-13!57;CL:0000215!5.28e-13!57;CL:0000115!1.28e-12!35;CL:0000057!6.84e-12!75;CL:0000144!9.90e-12!625;CL:0002139!9.96e-12!24;CL:0000359!4.51e-11!32;CL:0000548!7.86e-10!679;CL:0000004!7.86e-10!679;CL:0000255!7.86e-10!679;CL:0000012!1.35e-09!682;CL:0002371!2.99e-09!591;CL:1000449!3.19e-08!16;CL:0000071!5.16e-08!18;CL:0002546!5.16e-08!18;CL:0002681!2.97e-07!13;CL:0002584!2.97e-07!13 | ||
|ontology_enrichment_celltype_v019=CL:0002139;1.11e-12;24!CL:0000115;1.27e-12;36!CL:0000359;6.05e-11;32!CL:0002078;3.11e-10;45!CL:0000192;5.55e-10;43!CL:0000071;1.25e-08;18!CL:0000187;1.49e-08;55!CL:0000213;1.50e-08;58!CL:0000215;1.50e-08;58!CL:1000449;2.06e-08;15!CL:0000393;4.11e-08;61!CL:0000211;4.11e-08;61!CL:0002681;1.75e-07;12!CL:0002584;1.75e-07;12 | |ontology_enrichment_celltype_v019=CL:0002139;1.11e-12;24!CL:0000115;1.27e-12;36!CL:0000359;6.05e-11;32!CL:0002078;3.11e-10;45!CL:0000192;5.55e-10;43!CL:0000071;1.25e-08;18!CL:0000187;1.49e-08;55!CL:0000213;1.50e-08;58!CL:0000215;1.50e-08;58!CL:1000449;2.06e-08;15!CL:0000393;4.11e-08;61!CL:0000211;4.11e-08;61!CL:0002681;1.75e-07;12!CL:0002584;1.75e-07;12 | ||
|ontology_enrichment_celltype_v019_2=CL:0000222,1.23e-31,121;CL:0002321,1.34e-23,250;CL:0000680,1.69e-16,58;CL:0000056,1.69e-16,58;CL:0000355,1.69e-16,58;CL:0002078,1.05e-15,45;CL:0000187,3.15e-15,55;CL:0000393,4.47e-15,61;CL:0000211,4.47e-15,61;CL:0000115,7.27e-15,36;CL:0000192,3.70e-14,43;CL:0000514,3.70e-14,43;CL:0000213,6.34e-14,58;CL:0000215,6.34e-14,58;CL:0002139,7.25e-13,24;CL:0000057,1.12e-12,76;CL:0000359,1.33e-11,32;CL:0000071,8.68e-09,18;CL:0002546,8.68e-09,18;CL:1000449,1.65e-08,15;CL:0002681,1.88e-07,12;CL:0002584,1.88e-07,12 | |||
|ontology_enrichment_development_v019=CL:0000514;5.55e-10;43!CL:0000222;2.85e-09;121!CL:0000355;4.75e-09;58!CL:0002546;1.25e-08;18 | |ontology_enrichment_development_v019=CL:0000514;5.55e-10;43!CL:0000222;2.85e-09;121!CL:0000355;4.75e-09;58!CL:0002546;1.25e-08;18 | ||
|ontology_enrichment_disease=DOID:2394!5.19e-07!14 | |ontology_enrichment_disease=DOID:2394!5.19e-07!14 | ||
|ontology_enrichment_disease_v019=DOID:2394;4.10e-07;14 | |ontology_enrichment_disease_v019=DOID:2394;4.10e-07;14 | ||
|ontology_enrichment_disease_v019_2=DOID:2394,4.11e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0002049!1.05e-26!79;UBERON:0007798!1.05e-26!79;UBERON:0000055!5.27e-23!69;UBERON:0004872!2.04e-21!84;UBERON:0001981!4.98e-20!60;UBERON:0007500!4.98e-20!60;UBERON:0004537!4.98e-20!60;UBERON:0006965!4.98e-20!60;UBERON:0003914!5.72e-19!118;UBERON:0004535!1.04e-18!110;UBERON:0001009!1.38e-18!113;UBERON:0000914!1.39e-15!83;UBERON:0002329!1.39e-15!83;UBERON:0003077!1.39e-15!83;UBERON:0003059!1.39e-15!83;UBERON:0007282!1.39e-15!83;UBERON:0009618!1.39e-15!83;UBERON:0007285!1.39e-15!83;UBERON:0005256!4.25e-15!143;UBERON:0000486!1.24e-14!82;UBERON:0001134!3.46e-14!61;UBERON:0002036!3.46e-14!61;UBERON:0003082!3.46e-14!61;UBERON:0004290!3.54e-14!70;UBERON:0002385!6.96e-14!63;UBERON:0001015!6.96e-14!63;UBERON:0000383!6.96e-14!63;UBERON:0001637!1.41e-13!42;UBERON:0003509!1.41e-13!42;UBERON:0004572!1.41e-13!42;UBERON:0000490!4.83e-13!138;UBERON:0000119!4.11e-11!312;UBERON:0004573!6.53e-11!33;UBERON:0004571!6.53e-11!33;UBERON:0000483!8.27e-11!309;UBERON:0000477!1.30e-10!286;UBERON:0002100!2.98e-10!216;UBERON:0000468!4.93e-10!659;UBERON:0000475!2.27e-09!365;UBERON:0004211!3.19e-08!16;UBERON:0001285!3.19e-08!16;UBERON:0007684!3.19e-08!16;UBERON:0003220!3.19e-08!16;UBERON:0004208!3.19e-08!16;UBERON:0000353!3.89e-08!17;UBERON:0001986!5.16e-08!18;UBERON:0004638!5.16e-08!18;UBERON:0004852!5.16e-08!18;UBERON:0006555!1.32e-07!17;UBERON:0005103!1.32e-07!17;UBERON:0000083!1.32e-07!17;UBERON:0009201!1.32e-07!17;UBERON:0004819!1.32e-07!17;UBERON:0006553!1.32e-07!17;UBERON:0003074!1.32e-07!17;UBERON:0003060!1.32e-07!17;UBERON:0000947!1.50e-07!21;UBERON:0010191!1.50e-07!21;UBERON:0006914!2.72e-07!25;UBERON:0001225!2.97e-07!13;UBERON:0008987!2.97e-07!13;UBERON:0004111!4.21e-07!241;UBERON:0003104!5.12e-07!238;UBERON:0009142!5.12e-07!238;UBERON:0000487!8.04e-07!22;UBERON:0003103!9.38e-07!69 | |ontology_enrichment_uberon=UBERON:0002049!1.05e-26!79;UBERON:0007798!1.05e-26!79;UBERON:0000055!5.27e-23!69;UBERON:0004872!2.04e-21!84;UBERON:0001981!4.98e-20!60;UBERON:0007500!4.98e-20!60;UBERON:0004537!4.98e-20!60;UBERON:0006965!4.98e-20!60;UBERON:0003914!5.72e-19!118;UBERON:0004535!1.04e-18!110;UBERON:0001009!1.38e-18!113;UBERON:0000914!1.39e-15!83;UBERON:0002329!1.39e-15!83;UBERON:0003077!1.39e-15!83;UBERON:0003059!1.39e-15!83;UBERON:0007282!1.39e-15!83;UBERON:0009618!1.39e-15!83;UBERON:0007285!1.39e-15!83;UBERON:0005256!4.25e-15!143;UBERON:0000486!1.24e-14!82;UBERON:0001134!3.46e-14!61;UBERON:0002036!3.46e-14!61;UBERON:0003082!3.46e-14!61;UBERON:0004290!3.54e-14!70;UBERON:0002385!6.96e-14!63;UBERON:0001015!6.96e-14!63;UBERON:0000383!6.96e-14!63;UBERON:0001637!1.41e-13!42;UBERON:0003509!1.41e-13!42;UBERON:0004572!1.41e-13!42;UBERON:0000490!4.83e-13!138;UBERON:0000119!4.11e-11!312;UBERON:0004573!6.53e-11!33;UBERON:0004571!6.53e-11!33;UBERON:0000483!8.27e-11!309;UBERON:0000477!1.30e-10!286;UBERON:0002100!2.98e-10!216;UBERON:0000468!4.93e-10!659;UBERON:0000475!2.27e-09!365;UBERON:0004211!3.19e-08!16;UBERON:0001285!3.19e-08!16;UBERON:0007684!3.19e-08!16;UBERON:0003220!3.19e-08!16;UBERON:0004208!3.19e-08!16;UBERON:0000353!3.89e-08!17;UBERON:0001986!5.16e-08!18;UBERON:0004638!5.16e-08!18;UBERON:0004852!5.16e-08!18;UBERON:0006555!1.32e-07!17;UBERON:0005103!1.32e-07!17;UBERON:0000083!1.32e-07!17;UBERON:0009201!1.32e-07!17;UBERON:0004819!1.32e-07!17;UBERON:0006553!1.32e-07!17;UBERON:0003074!1.32e-07!17;UBERON:0003060!1.32e-07!17;UBERON:0000947!1.50e-07!21;UBERON:0010191!1.50e-07!21;UBERON:0006914!2.72e-07!25;UBERON:0001225!2.97e-07!13;UBERON:0008987!2.97e-07!13;UBERON:0004111!4.21e-07!241;UBERON:0003104!5.12e-07!238;UBERON:0009142!5.12e-07!238;UBERON:0000487!8.04e-07!22;UBERON:0003103!9.38e-07!69 | ||
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|phase1_expression=4.72363786103447,5.56661362116556,6.76581139660662,3.00219895059391,1.78784437770915,1.74467704820074,0,0.631719873426831,2.08948502559871,1.96587149201207,4.18680700783456,6.334799791775,4.74780560811216,3.09415882400117,3.97676850873499,5.3786011716142,6.62963980826375,4.38186054232424,6.34312638427659,1.60057375499824,3.67201244239655,1.88072832886853,1.43117993565528,1.36874425072884,1.63205431473244,0,0,0,0,0,0.309632246632152,0,1.50602959389125,0.369754010166788,0,0,0.293600439334847,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.64342657158052,0,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0.276350017785848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,2.01210257911091,2.42938867502708,2.1686349143074,0.50133791063589,4.63508860674636,3.1811437882044,1.45990461090791,4.72674085820339,3.54767035940102,5.53359149866694,0.327447688744282,1.45718115317017,0.741568885568859,0,0,0,0,0,0,2.98143611050058,6.881876760849,4.51282652089873,0,4.61449379830897,4.95212475492121,3.76190939766259,5.94358546089456,10.6729878806013,7.36385348082274,9.26507429351038,4.56163263431108,15.864033740631,4.41195696415042,6.48113558305408,5.00078478390847,5.83776368828041,5.0675166217495,3.06633274931766,3.79706263827252,4.21364011039937,0,0,2.61656431285521,3.97577561356255,3.92554586160197,5.16395805171553,5.73673241497627,2.12801029319014,2.80338800071154,5.33744978648525,2.71334303258876,3.7345324247972,2.55950276932407,2.61539044981534,4.38936540170301,5.76175924479999,3.28050004567315,2.49728061464256,1.71141546463335,0.747243402759005,2.3486899728753,1.45685649931318,1.68540968042698,2.65400422631361,2.57952066354713,2.6864703105699,2.37600571456411,3.21447008062124,0,3.59309070908119,2.18836948140286,3.503318556415,2.49357703935765,3.95079858792754,2.14541457059314,2.70428506031874,2.49550802952046,7.17558542755448,2.34913127700424,2.54318281391474,7.20218630602566,3.09157587715317,4.12224864073007,3.7223371266318,11.4767905924061,3.99491721160914,3.5340728394176,2.85354685791128,1.45481451136931,4.9701342952326,2.41805035746337,3.39121184620975,3.67195621010264,2.72746120590835,3.72845974005705,3.90315859614705,4.5060121229305,2.44007280025989,3.00617059544574,3.02785021050754,2.91981887260664,1.56449532329816,3.85944562915731,1.38134921352481,0.928735856063958,2.88751792667834,2.12952240071719,1.18009283054671,1.68707720918437,1.65440959098591,1.96091499683166,1.89816495288877,2.02246962240247,1.76599318612811,4.61696588335668,14.0249536378683,12.6217596423101,2.8810180793198,1.47008711385542,0,0,1.18157981336281,0,0,4.11762744716461,4.39001141634502,1.1240175325762,0.201057944823262,2.12953423864618,1.3032332212413,5.19967392639789,4.3299402607582,3.94163376915261,11.7408694235822,8.22888752238121,9.72269576410883,13.3177906564219,0,0,0,0,0,0.93733833986777,2.68771405118175,2.41017665312057,0.985143749731331,0.290633938513962,2.30029607499127,0,0,0,0,0,0.761974731506028,0,1.17217447210047,1.71072446022705,0.822619941626588,0.901029173531752,1.71495859578347,1.56983518083505,3.05172048183296,2.2001485746285,7.10994436667778,0,3.381211010224,4.5209479819428,1.04007436911366,3.08648849114571,1.41849132023278,3.99633268524149,7.86378965119812,13.5655401347861,8.23240336780769,2.28015329005615,8.17401482107855,2.37585561880029,3.31583314765545,4.35766729300147,3.09916272664377,0,0,0,3.59437283237374,1.14861935834114,1.42636905040718,3.4747513600219,4.10952645100767,6.08807275015645,0,0,0,0,1.01637849688985,2.60279707715243,0,1.17261385734044,0,0,0,0,2.4538298343828,3.00102312635806,1.62759014219841,6.44709670745502,5.17444067511769,6.78120384645919,4.21709093973768,2.70851489754947,4.5481500811197,1.03473071292505,5.97803038681893,3.50301420229236,2.86715927744673,4.30762546418029,3.77457766191941,0,0,0,2.12189300012382,0,4.83824469327489,4.46594054073798,7.21271274453894,4.2099014164961,3.71603532841533,2.55853624533352,7.07757253031873,0,0.616838775210622,2.84098760501003,2.46381468041427,3.11552657510173,2.44041794765914,0,3.40860999515584,0.920809889358963,4.24813458209045,2.73136752010076,3.54035920390445,5.86559496779635,3.54270550680308,4.70609861506113,2.92278449306521,4.22206515571503,10.2360045663807,5.95327968467805,7.34114114747274,15.4227252690289,5.1479823133332,10.5354852509519,3.3133915495855,1.66215201785745,6.49236788694317,0,0,2.3080511260475,2.29610251989794,1.95227036798582,0.824328093181778,0,0,3.44559322797703,3.90036147621913,9.64103579064957,2.41676795730305,1.23238893691716,2.30255512089194,1.92971201478343,3.54486808065303,3.0453505721988,2.98293195956353,4.09547363974992,1.65284915360978,3.45942121257191,2.93509238737543,2.12431339796655,0.464845549297286,14.1665556073788,4.8792608911242,4.31247012246524,4.7907542728532,2.60979897622522,8.52491407878032,2.57624796135584,2.60510858551767,3.16379424718726,2.47819252100972,1.79128453917934,3.85145089230528,2.22742273548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| ||
|short_description=p3@PXDN | |short_description=p3@PXDN | ||
}} | }} |
Latest revision as of 06:46, 18 September 2015
Short description: | p3@PXDN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_PXDN_5end |
Coexpression cluster: | C4144_Mesenchymal_Smooth_Renal_hepatic_Lens_epithelioid_Endothelial |
Association with transcript: | -52bp_to_NM_012293, uc002qxa.2, uc002qxb.1, uc002qxc.1_5end |
EntrezGene: | PXDN |
HGNC: | 14966 |
UniProt: | Q92626 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 1.23e-31 | 121 |
embryonic cell | 1.34e-23 | 250 |
muscle precursor cell | 1.69e-16 | 58 |
myoblast | 1.69e-16 | 58 |
multi-potent skeletal muscle stem cell | 1.69e-16 | 58 |
meso-epithelial cell | 1.05e-15 | 45 |
muscle cell | 3.15e-15 | 55 |
electrically responsive cell | 4.47e-15 | 61 |
electrically active cell | 4.47e-15 | 61 |
endothelial cell | 7.27e-15 | 36 |
smooth muscle cell | 3.70e-14 | 43 |
smooth muscle myoblast | 3.70e-14 | 43 |
lining cell | 6.34e-14 | 58 |
barrier cell | 6.34e-14 | 58 |
endothelial cell of vascular tree | 7.25e-13 | 24 |
fibroblast | 1.12e-12 | 76 |
vascular associated smooth muscle cell | 1.33e-11 | 32 |
blood vessel endothelial cell | 8.68e-09 | 18 |
embryonic blood vessel endothelial progenitor cell | 8.68e-09 | 18 |
epithelial cell of nephron | 1.65e-08 | 15 |
kidney cortical cell | 1.88e-07 | 12 |
renal cortical epithelial cell | 1.88e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 4.11e-07 | 14 |