FFCP PHASE1:Hg19::chr19:42212612..42212625,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1048 | |EntrezGene=1048 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1817 | |HGNC=1817 | ||
|TSSclassifier=strong | |||
|UniProt=E7ESE8 | |UniProt=E7ESE8 | ||
|association_with_transcript=0bp_to_ENST00000378181_5end | |association_with_transcript=0bp_to_ENST00000378181_5end | ||
|cluster_id=chr19:42212612..42212625,+ | |||
|description=CAGE_peak_3_at_CEACAM5_5end | |description=CAGE_peak_3_at_CEACAM5_5end | ||
|id=chr19:42212612..42212625,+ | |id=chr19:42212612..42212625,+ | ||
|ontology_enrichment_celltype=CL:0002076!2.04e-14!43;CL:0002368!5.63e-10!13;CL:0000223!1.13e-09!59 | |ontology_enrichment_celltype=CL:0002076!2.04e-14!43;CL:0002368!5.63e-10!13;CL:0000223!1.13e-09!59 | ||
|ontology_enrichment_celltype_v019=CL:0000167;3.08e-14;1!CL:0000164;3.08e-14;1!CL:0000502;3.08e-14;1!CL:0000172;3.08e-14;1!CL:0000173;3.08e-14;1!CL:0002553;3.98e-14;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000167,3.08e-14,1;CL:0000164,3.08e-14,1;CL:0000502,3.08e-14,1;CL:0000172,3.08e-14,1;CL:0000173,3.08e-14,1;CL:0002351,3.08e-14,1;CL:0002553,3.98e-14,1 | |||
|ontology_enrichment_development_v019=CL:0002351;3.08e-14;1!UBERON:0001045;4.53e-14;1!UBERON:0009143;6.65e-14;1!UBERON:0008814;1.87e-07;2!UBERON:0010056;1.87e-07;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:4430;3.08e-14;1 | |||
|ontology_enrichment_disease_v019_2=DOID:4430,3.08e-14,1 | |||
|ontology_enrichment_uberon=UBERON:0004119!9.12e-19!169;UBERON:0000925!9.12e-19!169;UBERON:0006595!9.12e-19!169;UBERON:0004921!1.08e-15!129;UBERON:0004185!1.08e-15!129;UBERON:0001007!1.30e-15!155;UBERON:0001555!1.30e-15!155;UBERON:0007026!1.30e-15!155;UBERON:0001004!3.04e-13!72;UBERON:0000065!3.32e-13!53;UBERON:0000059!7.14e-13!11;UBERON:0005409!2.97e-11!35;UBERON:0000344!7.93e-11!12;UBERON:0000974!1.66e-09!10;UBERON:0000077!1.78e-09!130;UBERON:0003127!1.89e-09!2;UBERON:0000341!3.08e-09!2;UBERON:0005178!4.84e-08!34;UBERON:0002224!4.84e-08!34;UBERON:0000160!7.50e-08!27;UBERON:0004907!7.61e-08!5;UBERON:0005181!9.15e-08!35;UBERON:0001155!1.34e-07!9;UBERON:0000063!6.67e-07!97;UBERON:0001046!7.94e-07!19;UBERON:0000072!8.86e-07!46 | |||
|ontology_enrichment_uberon_v019=UBERON:0003127;1.27e-25;2!UBERON:0001154;4.53e-14;1!UBERON:0001153;4.53e-14;1!UBERON:0009854;4.53e-14;1!UBERON:0002372;8.57e-14;1!UBERON:0001961;8.57e-14;1!UBERON:0001744;8.57e-14;1!UBERON:0001042;8.57e-14;1!UBERON:0001735;8.57e-14;1!UBERON:0001155;2.91e-13;9!UBERON:0004921;2.07e-11;33!UBERON:0000059;5.90e-11;11!UBERON:0005409;4.64e-09;22!UBERON:0003126;5.28e-08;7!UBERON:0001005;5.28e-08;7!UBERON:0000341;1.54e-07;2!UBERON:0006562;1.54e-07;2!UBERON:0000160;6.81e-07;17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003127,1.12e-25,2;UBERON:0001154,4.53e-14,1;UBERON:0001153,4.53e-14,1;UBERON:0001045,4.53e-14,1;UBERON:0002372,9.73e-14,1;UBERON:0001961,9.73e-14,1;UBERON:0001744,9.73e-14,1;UBERON:0001735,9.73e-14,1;UBERON:0001155,2.80e-13,9;UBERON:0004921,2.45e-11,118;UBERON:0000059,5.70e-11,11;UBERON:0001007,5.60e-09,145;UBERON:0001555,5.60e-09,145;UBERON:0007026,5.60e-09,145;UBERON:0005409,4.81e-08,25;UBERON:0003126,5.10e-08,7;UBERON:0001005,5.10e-08,7;UBERON:0004119,5.25e-08,160;UBERON:0000925,5.25e-08,160;UBERON:0006595,5.25e-08,160;UBERON:0000341,1.54e-07,2;UBERON:0000160,6.67e-07,17 | |||
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| ||
|short_description=p3@CEACAM5 | |short_description=p3@CEACAM5 | ||
}} | }} |
Latest revision as of 06:16, 18 September 2015
Short description: | p3@CEACAM5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CEACAM5_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000378181_5end |
EntrezGene: | CEACAM5 |
HGNC: | 1817 |
UniProt: | E7ESE8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
peptide hormone secreting cell | 3.08e-14 | 1 |
enteroendocrine cell | 3.08e-14 | 1 |
type D enteroendocrine cell | 3.08e-14 | 1 |
somatostatin secreting cell | 3.08e-14 | 1 |
pancreatic D cell | 3.08e-14 | 1 |
progenitor cell of endocrine pancreas | 3.08e-14 | 1 |
lung fibroblast | 3.98e-14 | 1 |
Ontology term | p-value | n |
---|---|---|
open tracheal system trachea | 1.12e-25 | 2 |
vermiform appendix | 4.53e-14 | 1 |
caecum | 4.53e-14 | 1 |
midgut | 4.53e-14 | 1 |
tonsil | 9.73e-14 | 1 |
mucosa-associated lymphoid tissue | 9.73e-14 | 1 |
lymphoid tissue | 9.73e-14 | 1 |
tonsillar ring | 9.73e-14 | 1 |
colon | 2.80e-13 | 9 |
subdivision of digestive tract | 2.45e-11 | 118 |
large intestine | 5.70e-11 | 11 |
digestive system | 5.60e-09 | 145 |
digestive tract | 5.60e-09 | 145 |
primitive gut | 5.60e-09 | 145 |
gastrointestinal system | 4.81e-08 | 25 |
trachea | 5.10e-08 | 7 |
respiratory airway | 5.10e-08 | 7 |
endoderm-derived structure | 5.25e-08 | 160 |
endoderm | 5.25e-08 | 160 |
presumptive endoderm | 5.25e-08 | 160 |
throat | 1.54e-07 | 2 |
intestine | 6.67e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
somatostatinoma | 3.08e-14 | 1 |