FFCP PHASE1:Hg19::chr9:93563891..93563900,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6850 | |EntrezGene=6850 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11491 | |HGNC=11491 | ||
|TSSclassifier=strong | |||
|UniProt=P43405,A8K4G2 | |UniProt=P43405,A8K4G2 | ||
|association_with_transcript=-111bp_to_NM_001135052,NM_003177,uc004aqy.2,uc004aqz.2,uc004ara.2_5end | |association_with_transcript=-111bp_to_NM_001135052,NM_003177,uc004aqy.2,uc004aqz.2,uc004ara.2_5end | ||
|cluster_id=chr9:93563891..93563900,+ | |||
|description=CAGE_peak_9_at_SYK_5end | |description=CAGE_peak_9_at_SYK_5end | ||
|id=chr9:93563891..93563900,+ | |id=chr9:93563891..93563900,+ | ||
|ontology_enrichment_celltype=CL:0000945!2.21e-21!24;CL:0000826!2.21e-21!24;CL:0000542!1.09e-13!53;CL:0000051!1.09e-13!53;CL:0000838!8.50e-13!52;CL:0000236!1.81e-10!14 | |ontology_enrichment_celltype=CL:0000945!2.21e-21!24;CL:0000826!2.21e-21!24;CL:0000542!1.09e-13!53;CL:0000051!1.09e-13!53;CL:0000838!8.50e-13!52;CL:0000236!1.81e-10!14 | ||
|ontology_enrichment_celltype_v019=CL:0000236;2.37e-25;13!CL:0000785;1.40e-14;1!CL:0000819;1.40e-14;1!CL:0000945;9.28e-14;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000236,2.20e-23,14;CL:0000819,1.41e-14,1;CL:0000945,1.15e-13,24;CL:0000826,1.15e-13,24;CL:0000785,6.15e-08,2;CL:0000955,6.15e-08,2;CL:0000818,6.15e-08,2;CL:0000954,6.15e-08,2;CL:0000816,6.15e-08,2 | |||
|ontology_enrichment_development_v019=UBERON:0007123;6.69e-12;5!CL:0000954;6.14e-08;2 | |||
|ontology_enrichment_disease=DOID:0060058!1.79e-08!10;DOID:0050686!2.39e-08!137;DOID:2531!1.05e-07!51;DOID:0060083!1.05e-07!51;DOID:162!6.41e-07!235 | |ontology_enrichment_disease=DOID:0060058!1.79e-08!10;DOID:0050686!2.39e-08!137;DOID:2531!1.05e-07!51;DOID:0060083!1.05e-07!51;DOID:162!6.41e-07!235 | ||
|ontology_enrichment_disease_v019=DOID:0050619;1.40e-14;1!DOID:0060073;1.40e-14;1!DOID:8675;1.40e-14;1!DOID:1357;1.40e-14;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0050619,7.13e-15,1;DOID:1357,7.13e-15,1;DOID:0060073,1.41e-14,1;DOID:8675,1.41e-14,1 | |||
|ontology_enrichment_uberon=UBERON:0000974!3.73e-11!10;UBERON:0004177!3.56e-09!7;UBERON:0000945!6.14e-07!8;UBERON:0010039!6.14e-07!8 | |ontology_enrichment_uberon=UBERON:0000974!3.73e-11!10;UBERON:0004177!3.56e-09!7;UBERON:0000945!6.14e-07!8;UBERON:0010039!6.14e-07!8 | ||
|ontology_enrichment_uberon_v019=UBERON:0002370;2.38e-27;2!UBERON:0005058;2.38e-27;2!UBERON:0009113;2.38e-27;2!UBERON:0001764;1.40e-14;1!UBERON:0001825;1.40e-14;1!UBERON:0002046;6.69e-12;5!UBERON:0004177;1.50e-11;5!UBERON:0005057;1.50e-11;5!UBERON:0000341;6.14e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0009722,8.57e-20,11;UBERON:0007690,8.57e-20,11;UBERON:0001764,7.13e-15,1;UBERON:0001825,7.13e-15,1;UBERON:0002370,3.61e-14,4;UBERON:0005058,3.61e-14,4;UBERON:0009113,3.61e-14,4;UBERON:0003295,3.61e-14,4;UBERON:0005562,3.61e-14,4;UBERON:0000974,1.75e-12,10;UBERON:0008814,3.23e-12,18;UBERON:0002046,6.70e-12,5;UBERON:0004117,6.70e-12,5;UBERON:0007689,6.70e-12,5;UBERON:0007123,6.70e-12,5;UBERON:0003091,6.70e-12,5;UBERON:0003351,9.26e-10,6;UBERON:0004177,1.72e-08,7;UBERON:0005057,1.72e-08,7;UBERON:0000341,6.58e-08,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229240217243854,0.0821005894499457,0.157421562627358,0,0,0.154816123316076,0,0,0,0.309868802321207,0.284338464974843,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75996244461323,0,0,0.853460445133014,0,1.14950487990897,0.661044872784862,0,1.1384259382189,1.17447437874188,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0.324547393654683,0,0,0.476981248610684,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176096868026452,0,0,0,0,0.381988425558278,1.17217447210047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.896681151948218,0.197030760201927,0.215627574859517,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231046011313244,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288666338176536,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0.411362273086194,0,0,0,0,0,0,0.185803175125719,0.432807638929335,0,0,0.199579371432817,0.191505370132367,0,0,0,0.684704037099577,0,0,0,0,0,0,0,0,0,0,0.19538809540204,0,0,0,0,0,0,0,0,0.334330152832435,0,0,0,0,0,0,0,0,0,0,0,0.251932747854276,0,0.123084805461069,0,0.0898683511473268,0,0,0,0,0,0,0,0,0.260427761085233,0,0,0,0.762760950878299,0,0,0,0.173624994933292,0,0,0,0,0,0,0,0.278847488557207,0,0,0.23056390438806,0,0,0,0,0,0,0.156980256395025,0,0,0.19606253431774,0.167821586975843,0.189753732724185,0,0,0,0,0.216388639742091,0,0.0884575645033392,0,0,0,0,0,0,0,1.27718352450966,0,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0.0979923974143777,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0.391102765469606,0.0801588202515337,0.213452994739353,0,0.144090417154106,0,0,0,0,0.707082103850386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169346664131569,0,0,0,0.137539436597234,0,0,0.77380195455795,0,0,0,0.629455057619977,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0.704815022316672,0,0,0.414239055347196,0,1.58089305518355,0.852548188666271,0.638341257770182,0,0,0,0,1.72759505875258,0,0,0,0,0,0.124192805882767,0,0,0,0,0,0,0.28984205722165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132864840313363,0,0,0,0,0,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0.23658523500376,0,0,0,0,0,0,0,0,0,0,0,0.392590874004102,0.11796972334774,0,0.115525666150338,0,0,0,0,0,0.781514011233092,0,0,0.295712172434091,0,0,0,0,0,0,0,0,0.255524855279191,0,0,0,0,0,0.230467975111559,0,0,0,0,0,0,0,0,0,0,0,0,1.42212250559454,0,0,0,0,0,0,0,0,0,0,0.68732060563215,0,0,0,0.098150233615243,0,0,0,0,0,1.63757624423474,0.596852325484105,0,0.22589216407792,0.109940516745429,0.754814217833368,0.231522474323834,0,0,0,0.235676547101626,0,0,0,0,0.0939839179798536,0.128915775947154,0.199882311849858,0,0,0.0802413666891683,0.730336388246517,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303114792872958,0,0,0,0.213233981900981,1.1903221573187,1.35636710655613,1.1794195716213,0,4.07341812980255,3.43599221228973,0,0,0.202056159043763,0.0717222053926763,0,0.0814032686109745,0,0,0.0898252021065869,0,0,0.406896178315738,0,0.805095174364105,0.641136984606466 | |phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229240217243854,0.0821005894499457,0.157421562627358,0,0,0.154816123316076,0,0,0,0.309868802321207,0.284338464974843,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75996244461323,0,0,0.853460445133014,0,1.14950487990897,0.661044872784862,0,1.1384259382189,1.17447437874188,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0.324547393654683,0,0,0.476981248610684,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176096868026452,0,0,0,0,0.381988425558278,1.17217447210047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.896681151948218,0.197030760201927,0.215627574859517,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231046011313244,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288666338176536,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0.411362273086194,0,0,0,0,0,0,0.185803175125719,0.432807638929335,0,0,0.199579371432817,0.191505370132367,0,0,0,0.684704037099577,0,0,0,0,0,0,0,0,0,0,0.19538809540204,0,0,0,0,0,0,0,0,0.334330152832435,0,0,0,0,0,0,0,0,0,0,0,0.251932747854276,0,0.123084805461069,0,0.0898683511473268,0,0,0,0,0,0,0,0,0.260427761085233,0,0,0,0.762760950878299,0,0,0,0.173624994933292,0,0,0,0,0,0,0,0.278847488557207,0,0,0.23056390438806,0,0,0,0,0,0,0.156980256395025,0,0,0.19606253431774,0.167821586975843,0.189753732724185,0,0,0,0,0.216388639742091,0,0.0884575645033392,0,0,0,0,0,0,0,1.27718352450966,0,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0.0979923974143777,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0.391102765469606,0.0801588202515337,0.213452994739353,0,0.144090417154106,0,0,0,0,0.707082103850386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169346664131569,0,0,0,0.137539436597234,0,0,0.77380195455795,0,0,0,0.629455057619977,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0.704815022316672,0,0,0.414239055347196,0,1.58089305518355,0.852548188666271,0.638341257770182,0,0,0,0,1.72759505875258,0,0,0,0,0,0.124192805882767,0,0,0,0,0,0,0.28984205722165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132864840313363,0,0,0,0,0,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0.23658523500376,0,0,0,0,0,0,0,0,0,0,0,0.392590874004102,0.11796972334774,0,0.115525666150338,0,0,0,0,0,0.781514011233092,0,0,0.295712172434091,0,0,0,0,0,0,0,0,0.255524855279191,0,0,0,0,0,0.230467975111559,0,0,0,0,0,0,0,0,0,0,0,0,1.42212250559454,0,0,0,0,0,0,0,0,0,0,0.68732060563215,0,0,0,0.098150233615243,0,0,0,0,0,1.63757624423474,0.596852325484105,0,0.22589216407792,0.109940516745429,0.754814217833368,0.231522474323834,0,0,0,0.235676547101626,0,0,0,0,0.0939839179798536,0.128915775947154,0.199882311849858,0,0,0.0802413666891683,0.730336388246517,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303114792872958,0,0,0,0.213233981900981,1.1903221573187,1.35636710655613,1.1794195716213,0,4.07341812980255,3.43599221228973,0,0,0.202056159043763,0.0717222053926763,0,0.0814032686109745,0,0,0.0898252021065869,0,0,0.406896178315738,0,0.805095174364105,0.641136984606466 | ||
|short_description=p9@SYK | |short_description=p9@SYK | ||
}} | }} |
Latest revision as of 06:01, 18 September 2015
Short description: | p9@SYK |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_SYK_5end |
Coexpression cluster: | NA |
Association with transcript: | -111bp_to_NM_001135052, NM_003177, uc004aqy.2, uc004aqz.2, uc004ara.2_5end |
EntrezGene: | SYK |
HGNC: | 11491 |
UniProt: | P43405A8K4G2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 2.20e-23 | 14 |
B-1 B cell | 1.41e-14 | 1 |
lymphocyte of B lineage | 1.15e-13 | 24 |
pro-B cell | 1.15e-13 | 24 |
mature B cell | 6.15e-08 | 2 |
pre-B-II cell | 6.15e-08 | 2 |
transitional stage B cell | 6.15e-08 | 2 |
small pre-B-II cell | 6.15e-08 | 2 |
immature B cell | 6.15e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
entire pharyngeal arch endoderm | 8.57e-20 | 11 |
early pharyngeal endoderm | 8.57e-20 | 11 |
maxillary sinus | 7.13e-15 | 1 |
paranasal sinus | 7.13e-15 | 1 |
thymus | 3.61e-14 | 4 |
hemolymphoid system gland | 3.61e-14 | 4 |
thymic region | 3.61e-14 | 4 |
pharyngeal gland | 3.61e-14 | 4 |
thymus primordium | 3.61e-14 | 4 |
neck | 1.75e-12 | 10 |
pharyngeal arch system | 3.23e-12 | 18 |
thyroid gland | 6.70e-12 | 5 |
pharyngeal pouch | 6.70e-12 | 5 |
thyroid diverticulum | 6.70e-12 | 5 |
pharyngeal pouch 2 | 6.70e-12 | 5 |
thyroid primordium | 6.70e-12 | 5 |
pharyngeal epithelium | 9.26e-10 | 6 |
hemopoietic organ | 1.72e-08 | 7 |
immune organ | 1.72e-08 | 7 |
throat | 6.58e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
paranasal sinus cancer | 7.13e-15 | 1 |
maxillary sinus cancer | 7.13e-15 | 1 |
lymphatic system cancer | 1.41e-14 | 1 |
lymphosarcoma | 1.41e-14 | 1 |