FFCP PHASE1:Hg19::chr16:85833086..85833107,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10328 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7864 | |||
|TSSclassifier=strong | |||
|UniProt=O43402 | |||
|association_with_transcript=38bp_to_ENST00000253457_5end | |||
|cluster_id=chr16:85833086..85833107,- | |||
|description=CAGE_peak_2_at_COX4NB_5end | |||
|id=chr16:85833086..85833107,- | |||
|ontology_enrichment_celltype=CL:0000548!1.23e-31!679;CL:0000004!1.23e-31!679;CL:0000255!1.23e-31!679;CL:0000012!6.10e-31!682;CL:0000066!9.14e-31!254;CL:0002321!2.10e-25!248;CL:0000220!1.80e-24!246;CL:0000003!3.17e-17!722;CL:0000144!6.05e-16!625;CL:0000076!3.76e-15!62;CL:0000213!3.73e-14!57;CL:0000215!3.73e-14!57;CL:0000222!9.66e-14!119;CL:0000063!2.63e-12!578;CL:0002078!1.05e-09!44;CL:0000115!1.12e-09!35;CL:0000071!2.55e-09!18;CL:0002546!2.55e-09!18;CL:0002139!3.96e-09!24;CL:0002371!9.96e-09!591;CL:0000055!3.34e-07!180;CL:0002319!6.81e-07!25 | |||
|ontology_enrichment_celltype_v019=CL:0000071;1.26e-09;18!CL:0000213;3.05e-09;58!CL:0000215;3.05e-09;58!CL:0002139;3.97e-09;24!CL:0000115;1.39e-08;36!CL:0000076;2.98e-08;63!CL:0002078;4.27e-07;45!CL:0002319;6.89e-07;25!CL:0000077;7.92e-07;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,4.99e-30,253;CL:0002321,4.84e-25,250;CL:0000076,1.46e-15,63;CL:0000213,3.39e-15,58;CL:0000215,3.39e-15,58;CL:0000222,4.92e-14,121;CL:0000115,2.42e-10,36;CL:0002078,3.12e-10,45;CL:0000071,8.22e-10,18;CL:0002546,8.22e-10,18;CL:0002139,1.31e-09,24;CL:0002319,9.09e-07,25 | |||
|ontology_enrichment_development_v019=CL:0002546;1.26e-09;18 | |||
|ontology_enrichment_disease=DOID:162!1.39e-16!235;DOID:14566!6.13e-16!239;DOID:305!2.18e-13!106;DOID:0050687!2.12e-12!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:162,2.92e-14,235;DOID:14566,1.07e-13,239;DOID:305,1.29e-12,106;DOID:0050687,4.04e-11,143 | |||
|ontology_enrichment_uberon=UBERON:0001986!2.55e-09!18;UBERON:0004638!2.55e-09!18;UBERON:0004852!2.55e-09!18;UBERON:0000487!4.05e-09!22;UBERON:0006914!1.10e-08!25;UBERON:0000055!1.92e-07!69 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;1.26e-09;18!UBERON:0001986;1.26e-09;18!UBERON:0004852;1.26e-09;18!UBERON:0000487;3.58e-09;22!UBERON:0006914;7.13e-09;25!UBERON:0000490;7.16e-09;33!UBERON:0003914;8.52e-07;74 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,8.22e-10,18;UBERON:0001986,8.22e-10,18;UBERON:0004852,8.22e-10,18;UBERON:0000487,1.34e-09,22;UBERON:0006914,3.16e-09,25;UBERON:0000055,6.99e-08,68;UBERON:0007500,4.88e-07,59;UBERON:0001981,4.88e-07,59;UBERON:0004537,4.88e-07,59;UBERON:0006965,4.88e-07,59;UBERON:0002049,7.30e-07,78;UBERON:0007798,7.30e-07,78 | |||
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| |||
|short_description=p2@COX4NB | |||
}} |
Latest revision as of 05:59, 18 September 2015
Short description: | p2@COX4NB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_COX4NB_5end |
Coexpression cluster: | NA |
Association with transcript: | 38bp_to_ENST00000253457_5end |
EntrezGene: | COX4NB |
HGNC: | 7864 |
UniProt: | O43402 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 4.99e-30 | 253 |
embryonic cell | 4.84e-25 | 250 |
squamous epithelial cell | 1.46e-15 | 63 |
lining cell | 3.39e-15 | 58 |
barrier cell | 3.39e-15 | 58 |
mesodermal cell | 4.92e-14 | 121 |
endothelial cell | 2.42e-10 | 36 |
meso-epithelial cell | 3.12e-10 | 45 |
blood vessel endothelial cell | 8.22e-10 | 18 |
embryonic blood vessel endothelial progenitor cell | 8.22e-10 | 18 |
endothelial cell of vascular tree | 1.31e-09 | 24 |
neural cell | 9.09e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
blood vessel endothelium | 8.22e-10 | 18 |
endothelium | 8.22e-10 | 18 |
cardiovascular system endothelium | 8.22e-10 | 18 |
simple squamous epithelium | 1.34e-09 | 22 |
squamous epithelium | 3.16e-09 | 25 |
vessel | 6.99e-08 | 68 |
epithelial tube open at both ends | 4.88e-07 | 59 |
blood vessel | 4.88e-07 | 59 |
blood vasculature | 4.88e-07 | 59 |
vascular cord | 4.88e-07 | 59 |
vasculature | 7.30e-07 | 78 |
vascular system | 7.30e-07 | 78 |
Ontology term | p-value | n |
---|---|---|
cancer | 2.92e-14 | 235 |
disease of cellular proliferation | 1.07e-13 | 239 |
carcinoma | 1.29e-12 | 106 |
cell type cancer | 4.04e-11 | 143 |