FFCP PHASE1:Hg19::chr1:44482969..44482978,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6536 | |EntrezGene=6536 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11056 | |HGNC=11056 | ||
|TSSclassifier=strong | |||
|UniProt=P48067 | |UniProt=P48067 | ||
|association_with_transcript=18bp_to_ENST00000357730,ENST00000360584,NM_006934,NM_201649,uc001cll.2,uc001clm.2,uc009vxd.2,uc010okn.1_5end | |association_with_transcript=18bp_to_ENST00000357730,ENST00000360584,NM_006934,NM_201649,uc001cll.2,uc001clm.2,uc009vxd.2,uc010okn.1_5end | ||
|cluster_id=chr1:44482969..44482978,- | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_11_at_SLC6A9_5end | |description=CAGE_peak_11_at_SLC6A9_5end | ||
|id=chr1:44482969..44482978,- | |id=chr1:44482969..44482978,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0005425;2.66e-18;1!UBERON:0006222;8.72e-18;1!UBERON:0006601;3.23e-08;82!UBERON:0003056;5.80e-07;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!8.79e-94!57;UBERON:0005068!8.79e-94!57;UBERON:0006241!8.79e-94!57;UBERON:0007135!8.79e-94!57;UBERON:0002616!3.74e-79!59;UBERON:0002780!2.87e-73!41;UBERON:0001890!2.87e-73!41;UBERON:0006240!2.87e-73!41;UBERON:0005743!9.97e-72!86;UBERON:0003080!1.93e-71!42;UBERON:0001017!4.15e-71!82;UBERON:0000955!1.53e-70!69;UBERON:0006238!1.53e-70!69;UBERON:0000073!1.28e-68!94;UBERON:0001016!1.28e-68!94;UBERON:0003075!2.33e-68!86;UBERON:0007284!2.33e-68!86;UBERON:0002020!9.89e-68!34;UBERON:0003528!9.89e-68!34;UBERON:0001893!1.06e-67!34;UBERON:0002346!4.52e-65!90;UBERON:0002791!2.27e-63!33;UBERON:0007023!2.99e-60!115;UBERON:0001869!1.27e-58!32;UBERON:0003056!5.38e-52!61;UBERON:0000033!1.05e-42!123;UBERON:0002619!3.96e-41!22;UBERON:0000153!1.87e-40!129;UBERON:0007811!1.87e-40!129;UBERON:0002308!3.08e-37!9;UBERON:0000125!3.08e-37!9;UBERON:0000956!4.79e-36!25;UBERON:0000203!4.79e-36!25;UBERON:0004121!7.76e-36!169;UBERON:0000924!7.16e-35!173;UBERON:0006601!7.16e-35!173;UBERON:0001950!4.51e-33!20;UBERON:0002420!4.39e-28!9;UBERON:0007245!4.39e-28!9;UBERON:0010009!4.39e-28!9;UBERON:0010011!4.39e-28!9;UBERON:0000454!4.39e-28!9;UBERON:0009663!4.46e-27!7;UBERON:0002298!1.12e-24!8;UBERON:0000025!2.17e-23!194;UBERON:0003076!3.39e-22!15;UBERON:0003057!3.39e-22!15;UBERON:0000200!2.36e-21!6;UBERON:0004732!5.00e-20!13;UBERON:0004111!1.43e-17!241;UBERON:0006331!1.85e-17!3;UBERON:0000988!3.57e-17!3;UBERON:0000349!6.98e-17!5;UBERON:0004733!5.25e-16!12;UBERON:0002028!5.25e-16!12;UBERON:0007277!5.25e-16!12;UBERON:0002771!6.34e-16!3;UBERON:0001871!6.99e-16!7;UBERON:0000477!6.22e-15!286;UBERON:0000483!2.09e-14!309;UBERON:0000064!3.23e-14!219;UBERON:0000119!3.33e-14!312;UBERON:0005162!1.55e-12!2;UBERON:0000122!1.55e-12!2;UBERON:0001875!3.56e-12!2;UBERON:0006514!3.56e-12!2;UBERON:0001897!3.76e-12!2;UBERON:0002148!3.97e-12!2;UBERON:0009662!3.97e-12!2;UBERON:0000369!4.09e-12!4;UBERON:0002435!4.09e-12!4;UBERON:0000204!4.09e-12!4;UBERON:0010082!4.09e-12!4;UBERON:0000475!4.12e-12!365;UBERON:0001954!1.90e-11!2;UBERON:0003022!1.90e-11!2;UBERON:0002421!1.90e-11!2;UBERON:0002600!1.90e-11!2;UBERON:0001872!3.95e-10!5;UBERON:0002680!7.69e-10!9;UBERON:0001895!7.69e-10!9;UBERON:0010092!7.69e-10!9;UBERON:0001896!1.60e-08!3;UBERON:0005290!1.60e-08!3;UBERON:0010096!1.60e-08!3;UBERON:0002240!3.43e-08!3;UBERON:0000062!4.07e-08!511;UBERON:0001894!9.90e-08!7;UBERON:0006222!9.90e-08!7;UBERON:0005383!1.21e-07!3;UBERON:0005382!1.21e-07!3;UBERON:0000941!4.09e-07!1;UBERON:0004904!4.09e-07!1;UBERON:0002464!4.09e-07!1;UBERON:0001021!4.09e-07!1;UBERON:0001785!4.09e-07!1;UBERON:0002336!4.33e-07!1;UBERON:0001018!4.33e-07!1;UBERON:0002473!4.33e-07!1;UBERON:0005340!4.33e-07!1;UBERON:0002316!4.33e-07!1;UBERON:0003544!4.33e-07!1;UBERON:0001020!4.33e-07!1;UBERON:0005970!4.33e-07!1;UBERON:0002437!4.33e-07!1;UBERON:0002038!4.85e-07!1;UBERON:0009661!4.85e-07!1 | |ontology_enrichment_uberon=UBERON:0001049!8.79e-94!57;UBERON:0005068!8.79e-94!57;UBERON:0006241!8.79e-94!57;UBERON:0007135!8.79e-94!57;UBERON:0002616!3.74e-79!59;UBERON:0002780!2.87e-73!41;UBERON:0001890!2.87e-73!41;UBERON:0006240!2.87e-73!41;UBERON:0005743!9.97e-72!86;UBERON:0003080!1.93e-71!42;UBERON:0001017!4.15e-71!82;UBERON:0000955!1.53e-70!69;UBERON:0006238!1.53e-70!69;UBERON:0000073!1.28e-68!94;UBERON:0001016!1.28e-68!94;UBERON:0003075!2.33e-68!86;UBERON:0007284!2.33e-68!86;UBERON:0002020!9.89e-68!34;UBERON:0003528!9.89e-68!34;UBERON:0001893!1.06e-67!34;UBERON:0002346!4.52e-65!90;UBERON:0002791!2.27e-63!33;UBERON:0007023!2.99e-60!115;UBERON:0001869!1.27e-58!32;UBERON:0003056!5.38e-52!61;UBERON:0000033!1.05e-42!123;UBERON:0002619!3.96e-41!22;UBERON:0000153!1.87e-40!129;UBERON:0007811!1.87e-40!129;UBERON:0002308!3.08e-37!9;UBERON:0000125!3.08e-37!9;UBERON:0000956!4.79e-36!25;UBERON:0000203!4.79e-36!25;UBERON:0004121!7.76e-36!169;UBERON:0000924!7.16e-35!173;UBERON:0006601!7.16e-35!173;UBERON:0001950!4.51e-33!20;UBERON:0002420!4.39e-28!9;UBERON:0007245!4.39e-28!9;UBERON:0010009!4.39e-28!9;UBERON:0010011!4.39e-28!9;UBERON:0000454!4.39e-28!9;UBERON:0009663!4.46e-27!7;UBERON:0002298!1.12e-24!8;UBERON:0000025!2.17e-23!194;UBERON:0003076!3.39e-22!15;UBERON:0003057!3.39e-22!15;UBERON:0000200!2.36e-21!6;UBERON:0004732!5.00e-20!13;UBERON:0004111!1.43e-17!241;UBERON:0006331!1.85e-17!3;UBERON:0000988!3.57e-17!3;UBERON:0000349!6.98e-17!5;UBERON:0004733!5.25e-16!12;UBERON:0002028!5.25e-16!12;UBERON:0007277!5.25e-16!12;UBERON:0002771!6.34e-16!3;UBERON:0001871!6.99e-16!7;UBERON:0000477!6.22e-15!286;UBERON:0000483!2.09e-14!309;UBERON:0000064!3.23e-14!219;UBERON:0000119!3.33e-14!312;UBERON:0005162!1.55e-12!2;UBERON:0000122!1.55e-12!2;UBERON:0001875!3.56e-12!2;UBERON:0006514!3.56e-12!2;UBERON:0001897!3.76e-12!2;UBERON:0002148!3.97e-12!2;UBERON:0009662!3.97e-12!2;UBERON:0000369!4.09e-12!4;UBERON:0002435!4.09e-12!4;UBERON:0000204!4.09e-12!4;UBERON:0010082!4.09e-12!4;UBERON:0000475!4.12e-12!365;UBERON:0001954!1.90e-11!2;UBERON:0003022!1.90e-11!2;UBERON:0002421!1.90e-11!2;UBERON:0002600!1.90e-11!2;UBERON:0001872!3.95e-10!5;UBERON:0002680!7.69e-10!9;UBERON:0001895!7.69e-10!9;UBERON:0010092!7.69e-10!9;UBERON:0001896!1.60e-08!3;UBERON:0005290!1.60e-08!3;UBERON:0010096!1.60e-08!3;UBERON:0002240!3.43e-08!3;UBERON:0000062!4.07e-08!511;UBERON:0001894!9.90e-08!7;UBERON:0006222!9.90e-08!7;UBERON:0005383!1.21e-07!3;UBERON:0005382!1.21e-07!3;UBERON:0000941!4.09e-07!1;UBERON:0004904!4.09e-07!1;UBERON:0002464!4.09e-07!1;UBERON:0001021!4.09e-07!1;UBERON:0001785!4.09e-07!1;UBERON:0002336!4.33e-07!1;UBERON:0001018!4.33e-07!1;UBERON:0002473!4.33e-07!1;UBERON:0005340!4.33e-07!1;UBERON:0002316!4.33e-07!1;UBERON:0003544!4.33e-07!1;UBERON:0001020!4.33e-07!1;UBERON:0005970!4.33e-07!1;UBERON:0002437!4.33e-07!1;UBERON:0002038!4.85e-07!1;UBERON:0009661!4.85e-07!1 | ||
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|short_description=p11@SLC6A9 | |short_description=p11@SLC6A9 | ||
}} | }} |
Latest revision as of 05:44, 18 September 2015
Short description: | p11@SLC6A9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_SLC6A9_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | 18bp_to_ENST00000357730, ENST00000360584, NM_006934, NM_201649, uc001cll.2, uc001clm.2, uc009vxd.2, uc010okn.1_5end |
EntrezGene: | SLC6A9 |
HGNC: | 11056 |
UniProt: | P48067 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data