FFCP PHASE1:Hg19::chr15:56035422..56035433,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr15:56035422..56035433,-
|short_description=p5@PRTG
|description=CAGE_peak_5_at_PRTG_5end
|association_with_transcript=-134bp_to_ENST00000561292_5end
|Entrez...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=283659 | |EntrezGene=283659 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26373 | |HGNC=26373 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-134bp_to_ENST00000561292_5end | |||
|cluster_id=chr15:56035422..56035433,- | |||
|coexpression_cluster_id=C1742 | |||
|description=CAGE_peak_5_at_PRTG_5end | |||
|id=chr15:56035422..56035433,- | |||
|ontology_enrichment_celltype=CL:0002322!9.01e-14!5;CL:0000710!3.58e-08!20;CL:0000133!4.87e-07!59;CL:0000075!6.82e-07!27 | |||
|ontology_enrichment_celltype_v019=CL:0002322;8.13e-21;5!CL:0000148;6.28e-11;10!CL:0000147;4.49e-08;14!CL:0002321;1.35e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,6.65e-21,5;CL:0000148,5.69e-11,10;CL:0000541,5.69e-11,10;CL:0000147,4.19e-08,14 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3095;6.58e-11;22!DOID:2994;6.58e-11;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,6.70e-11,22;DOID:2994,6.70e-11,22 | |||
|ontology_enrichment_uberon=UBERON:0003056!1.02e-08!61;UBERON:0000073!2.86e-08!94;UBERON:0001016!2.86e-08!94;UBERON:0003075!4.88e-08!86;UBERON:0007284!4.88e-08!86;UBERON:0005743!6.15e-08!86;UBERON:0002346!1.89e-07!90;UBERON:0000955!4.92e-07!69;UBERON:0006238!4.92e-07!69;UBERON:0001017!9.33e-07!82 | |||
|ontology_enrichment_uberon_v019=UBERON:0001905;1.09e-49;2!UBERON:0002757;1.09e-49;2!UBERON:0010134;1.09e-49;2!UBERON:0005408;1.09e-49;2!UBERON:0001899;1.09e-49;2!UBERON:0003296;1.84e-25;4!UBERON:0010133;1.84e-25;4!UBERON:0002784;1.84e-25;4!UBERON:0001894;5.04e-15;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,1.80e-49,2;UBERON:0002757,1.80e-49,2;UBERON:0010134,1.80e-49,2;UBERON:0005408,1.80e-49,2;UBERON:0001899,1.80e-49,2;UBERON:0003296,2.36e-25,4;UBERON:0010133,2.36e-25,4;UBERON:0002784,2.36e-25,4;UBERON:0001894,5.81e-15,7;UBERON:0006222,5.81e-15,7 | |||
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| ||
|short_description=p5@PRTG | |||
}} | }} |
Latest revision as of 04:51, 18 September 2015
Short description: | p5@PRTG |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_PRTG_5end |
Coexpression cluster: | C1742_teratocarcinoma_H9_hepatoblastoma_pancreatic_choriocarcinoma_pineal_mesodermal |
Association with transcript: | -134bp_to_ENST00000561292_5end |
EntrezGene: | PRTG |
HGNC: | 26373 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 6.65e-21 | 5 |
melanocyte | 5.69e-11 | 10 |
melanoblast | 5.69e-11 | 10 |
pigment cell | 4.19e-08 | 14 |
Ontology term | p-value | n |
---|---|---|
pineal body | 1.80e-49 | 2 |
regional part of epithalamus | 1.80e-49 | 2 |
secretory circumventricular organ | 1.80e-49 | 2 |
circumventricular organ | 1.80e-49 | 2 |
epithalamus | 1.80e-49 | 2 |
gland of diencephalon | 2.36e-25 | 4 |
neuroendocrine gland | 2.36e-25 | 4 |
regional part of diencephalon | 2.36e-25 | 4 |
diencephalon | 5.81e-15 | 7 |
future diencephalon | 5.81e-15 | 7 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 6.70e-11 | 22 |
germ cell cancer | 6.70e-11 | 22 |