FFCP PHASE1:Hg19::chr12:323699..323719,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6539 | |EntrezGene=6539 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11045 | |HGNC=11045 | ||
|TSSclassifier=strong | |||
|UniProt=P48065 | |UniProt=P48065 | ||
|association_with_transcript=-10bp_to_ENST00000428720_5end | |association_with_transcript=-10bp_to_ENST00000428720_5end | ||
|cluster_id=chr12:323699..323719,- | |||
|coexpression_cluster_id=C105 | |||
|description=CAGE_peak_1_at_SLC6A12_5end | |description=CAGE_peak_1_at_SLC6A12_5end | ||
|id=chr12:323699..323719,- | |id=chr12:323699..323719,- | ||
|ontology_enrichment_celltype=CL:0002057!2.66e-14!42;CL:0000860!5.88e-13!45;CL:0000453!5.20e-10!5;CL:0002009!4.06e-09!65;CL:0000557!1.06e-08!71;CL:0002194!1.73e-07!63;CL:0000576!1.73e-07!63;CL:0000040!1.73e-07!63;CL:0000559!1.73e-07!63;CL:0000839!5.49e-07!70 | |ontology_enrichment_celltype=CL:0002057!2.66e-14!42;CL:0000860!5.88e-13!45;CL:0000453!5.20e-10!5;CL:0002009!4.06e-09!65;CL:0000557!1.06e-08!71;CL:0002194!1.73e-07!63;CL:0000576!1.73e-07!63;CL:0000040!1.73e-07!63;CL:0000559!1.73e-07!63;CL:0000839!5.49e-07!70 | ||
|ontology_enrichment_celltype_v019=CL:0001014;1.09e-08;2!CL:0001016;1.09e-08;2!CL:0002575;3.31e-08;2!CL:0000453;3.40e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.23e-09,42;CL:0002057,1.23e-09,42;CL:0001014,9.89e-09,2;CL:0001016,9.89e-09,2;CL:0002009,3.35e-08,61;CL:0000473,3.97e-08,48;CL:0000234,3.97e-08,48;CL:0002575,4.19e-08,2;CL:0000453,3.06e-07,5;CL:0000557,3.21e-07,67 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.12e-09;82!CL:0002057;3.87e-07;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!8.44e-48!57;UBERON:0005068!8.44e-48!57;UBERON:0006241!8.44e-48!57;UBERON:0007135!8.44e-48!57;UBERON:0002616!1.76e-38!59;UBERON:0001017!1.62e-37!82;UBERON:0002020!8.67e-36!34;UBERON:0003528!8.67e-36!34;UBERON:0001893!9.19e-36!34;UBERON:0002780!1.51e-35!41;UBERON:0001890!1.51e-35!41;UBERON:0006240!1.51e-35!41;UBERON:0005743!3.76e-35!86;UBERON:0003080!1.72e-34!42;UBERON:0000955!2.23e-34!69;UBERON:0006238!2.23e-34!69;UBERON:0002791!4.31e-34!33;UBERON:0001869!2.70e-32!32;UBERON:0000073!3.17e-32!94;UBERON:0001016!3.17e-32!94;UBERON:0003075!3.27e-32!86;UBERON:0007284!3.27e-32!86;UBERON:0002346!3.44e-30!90;UBERON:0007023!3.26e-29!115;UBERON:0002619!1.83e-27!22;UBERON:0001950!4.04e-27!20;UBERON:0000956!1.33e-23!25;UBERON:0000203!1.33e-23!25;UBERON:0003056!5.67e-21!61;UBERON:0000033!2.59e-15!123;UBERON:0000153!6.53e-15!129;UBERON:0007811!6.53e-15!129;UBERON:0003076!4.70e-14!15;UBERON:0003057!4.70e-14!15;UBERON:0002308!6.15e-14!9;UBERON:0000125!6.15e-14!9;UBERON:0004121!5.75e-13!169;UBERON:0000200!1.31e-12!6;UBERON:0000924!2.22e-12!173;UBERON:0006601!2.22e-12!173;UBERON:0000062!4.35e-11!511;UBERON:0004732!4.40e-11!13;UBERON:0002420!8.15e-11!9;UBERON:0007245!8.15e-11!9;UBERON:0010009!8.15e-11!9;UBERON:0010011!8.15e-11!9;UBERON:0000454!8.15e-11!9;UBERON:0009663!1.67e-10!7;UBERON:0001872!5.50e-10!5;UBERON:0004733!1.20e-09!12;UBERON:0002028!1.20e-09!12;UBERON:0007277!1.20e-09!12;UBERON:0002298!4.86e-09!8;UBERON:0001871!5.76e-09!7;UBERON:0000369!1.73e-08!4;UBERON:0002435!1.73e-08!4;UBERON:0000204!1.73e-08!4;UBERON:0010082!1.73e-08!4;UBERON:0000025!4.75e-08!194;UBERON:0001737!5.00e-08!9;UBERON:0002680!1.50e-07!9;UBERON:0001895!1.50e-07!9;UBERON:0010092!1.50e-07!9;UBERON:0000064!1.69e-07!219;UBERON:0002771!2.94e-07!3;UBERON:0000923!4.10e-07!604;UBERON:0005291!4.10e-07!604;UBERON:0006598!4.10e-07!604;UBERON:0002532!4.10e-07!604;UBERON:0006331!4.40e-07!3;UBERON:0002371!4.48e-07!80;UBERON:0002050!4.60e-07!605;UBERON:0005423!4.60e-07!605;UBERON:0000988!6.80e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;2.88e-38;34!UBERON:0002791;1.93e-35;32!UBERON:0001869;1.51e-34;32!UBERON:0003528;5.76e-34;34!UBERON:0002020;5.76e-34;34!UBERON:0002619;7.98e-33;22!UBERON:0001950;2.40e-31;20!UBERON:0000073;2.64e-31;53!UBERON:0002616;2.64e-31;53!UBERON:0002780;1.57e-29;41!UBERON:0001890;1.57e-29;41!UBERON:0000956;1.31e-28;25!UBERON:0000203;1.31e-28;25!UBERON:0000200;4.79e-22;6!UBERON:0001017;5.07e-16;75!UBERON:0000125;7.77e-15;9!UBERON:0002308;7.77e-15;9!UBERON:0002420;9.66e-15;9!UBERON:0007245;9.66e-15;9!UBERON:0010009;9.66e-15;9!UBERON:0010011;9.66e-15;9!UBERON:0000454;9.66e-15;9!UBERON:0000955;1.70e-14;68!UBERON:0009663;1.94e-13;7!UBERON:0001016;4.31e-13;83!UBERON:0004732;6.55e-13;13!UBERON:0001870;4.16e-12;3!UBERON:0004733;1.42e-10;12!UBERON:0002028;1.42e-10;12!UBERON:0002298;3.72e-10;6!UBERON:0007023;2.13e-09;114!UBERON:0002702;7.86e-09;2!UBERON:0000369;8.03e-09;4!UBERON:0002435;8.03e-09;4!UBERON:0000204;8.03e-09;4!UBERON:0001871;1.04e-08;6!UBERON:0002771;2.13e-08;2!UBERON:0005162;5.29e-08;2!UBERON:0000122;5.29e-08;2!UBERON:0000349;2.09e-07;5!UBERON:0002021;3.22e-07;5!UBERON:0001872;3.33e-07;5!UBERON:0002680;8.32e-07;9!UBERON:0001895;8.32e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.98e-51,56;UBERON:0005068,1.98e-51,56;UBERON:0006241,1.98e-51,56;UBERON:0007135,1.98e-51,56;UBERON:0000073,7.93e-51,53;UBERON:0002616,7.93e-51,53;UBERON:0001893,5.56e-46,34;UBERON:0003528,5.03e-42,34;UBERON:0002020,5.03e-42,34;UBERON:0002780,3.15e-41,41;UBERON:0001890,3.15e-41,41;UBERON:0003080,3.15e-41,41;UBERON:0006240,3.15e-41,41;UBERON:0002791,2.38e-40,32;UBERON:0001869,3.94e-40,32;UBERON:0000955,1.74e-37,68;UBERON:0006238,1.74e-37,68;UBERON:0001017,2.66e-35,81;UBERON:0003075,2.73e-35,82;UBERON:0007284,2.73e-35,82;UBERON:0002346,2.65e-33,86;UBERON:0001016,2.68e-33,89;UBERON:0002619,5.79e-33,22;UBERON:0001950,1.75e-31,20;UBERON:0007023,5.02e-29,114;UBERON:0000956,9.92e-29,25;UBERON:0000203,9.92e-29,25;UBERON:0003056,2.03e-28,61;UBERON:0010371,3.04e-26,104;UBERON:0010314,4.38e-22,132;UBERON:0000200,4.90e-22,6;UBERON:0000125,8.37e-15,9;UBERON:0002308,8.37e-15,9;UBERON:0002420,1.04e-14,9;UBERON:0007245,1.04e-14,9;UBERON:0010009,1.04e-14,9;UBERON:0010011,1.04e-14,9;UBERON:0000454,1.04e-14,9;UBERON:0004121,7.27e-14,171;UBERON:0000924,7.27e-14,171;UBERON:0006601,7.27e-14,171;UBERON:0009663,2.11e-13,7;UBERON:0004732,6.62e-13,13;UBERON:0001870,4.66e-12,3;UBERON:0003076,3.13e-11,15;UBERON:0003057,3.13e-11,15;UBERON:0004733,1.40e-10,12;UBERON:0002028,1.40e-10,12;UBERON:0007277,1.40e-10,12;UBERON:0002298,3.59e-10,6;UBERON:0000025,6.32e-10,192;UBERON:0011216,1.12e-09,223;UBERON:0002702,7.29e-09,2;UBERON:0000369,8.60e-09,4;UBERON:0002435,8.60e-09,4;UBERON:0000204,8.60e-09,4;UBERON:0010082,8.60e-09,4;UBERON:0001871,9.34e-09,6;UBERON:0002771,2.09e-08,2;UBERON:0005162,6.46e-08,2;UBERON:0000122,6.46e-08,2;UBERON:0000349,2.12e-07,5;UBERON:0001872,2.93e-07,5;UBERON:0002021,3.26e-07,5;UBERON:0002680,8.66e-07,9;UBERON:0001895,8.66e-07,9;UBERON:0010092,8.66e-07,9 | |||
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|short_description=p1@SLC6A12 | |short_description=p1@SLC6A12 | ||
}} | }} |
Latest revision as of 04:50, 18 September 2015
Short description: | p1@SLC6A12 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SLC6A12_5end |
Coexpression cluster: | C105_heart_skeletal_occipital_hippocampus_acute_Sebocyte_penis |
Association with transcript: | -10bp_to_ENST00000428720_5end |
EntrezGene: | SLC6A12 |
HGNC: | 11045 |
UniProt: | P48065 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.23e-09 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.23e-09 | 42 |
CD1a-positive Langerhans cell | 9.89e-09 | 2 |
immature CD1a-positive Langerhans cell | 9.89e-09 | 2 |
macrophage dendritic cell progenitor | 3.35e-08 | 61 |
defensive cell | 3.97e-08 | 48 |
phagocyte | 3.97e-08 | 48 |
central nervous system pericyte | 4.19e-08 | 2 |
Langerhans cell | 3.06e-07 | 5 |
granulocyte monocyte progenitor cell | 3.21e-07 | 67 |