FFCP PHASE1:Hg19::chr1:43919573..43919681,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=81888 | |EntrezGene=81888 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26948 | |HGNC=26948 | ||
|TSSclassifier=strong | |||
|UniProt=Q5T013,Q5T017 | |UniProt=Q5T013,Q5T017 | ||
|association_with_transcript=0bp_to_ENST00000372425,ENST00000372427,ENST00000372432,NM_001190880,NM_001243526,NM_031207,uc001cjn.2,uc001cjo.2_5end | |association_with_transcript=0bp_to_ENST00000372425,ENST00000372427,ENST00000372432,NM_001190880,NM_001243526,NM_031207,uc001cjn.2,uc001cjo.2_5end | ||
|cluster_id=chr1:43919573..43919681,- | |||
|description=CAGE_peak_1_at_HYI_5end | |description=CAGE_peak_1_at_HYI_5end | ||
|id=chr1:43919573..43919681,- | |id=chr1:43919573..43919681,- | ||
|ontology_enrichment_celltype=CL:0000222!5.74e-32!119;CL:0000220!3.08e-24!246;CL:0002321!8.25e-24!248;CL:0000213!3.36e-21!57;CL:0000215!3.36e-21!57;CL:0000066!2.97e-18!254;CL:0002078!8.19e-17!44;CL:0000115!2.05e-16!35;CL:0002139!1.35e-15!24;CL:0000192!3.14e-14!42;CL:0000514!3.14e-14!42;CL:0000183!1.21e-13!59;CL:0000076!6.51e-13!62;CL:0000359!1.45e-12!32;CL:0000187!5.73e-12!54;CL:0000071!1.02e-11!18;CL:0002546!1.02e-11!18;CL:0000680!7.39e-11!57;CL:0000056!7.39e-11!57;CL:0000355!7.39e-11!57;CL:0000393!2.79e-10!60;CL:0000211!2.79e-10!60;CL:0000055!2.08e-08!180;CL:1000449!3.42e-08!16;CL:0000077!2.44e-07!19;CL:1000413!4.42e-07!9;CL:1000497!5.32e-07!18;CL:0002518!5.32e-07!18 | |ontology_enrichment_celltype=CL:0000222!5.74e-32!119;CL:0000220!3.08e-24!246;CL:0002321!8.25e-24!248;CL:0000213!3.36e-21!57;CL:0000215!3.36e-21!57;CL:0000066!2.97e-18!254;CL:0002078!8.19e-17!44;CL:0000115!2.05e-16!35;CL:0002139!1.35e-15!24;CL:0000192!3.14e-14!42;CL:0000514!3.14e-14!42;CL:0000183!1.21e-13!59;CL:0000076!6.51e-13!62;CL:0000359!1.45e-12!32;CL:0000187!5.73e-12!54;CL:0000071!1.02e-11!18;CL:0002546!1.02e-11!18;CL:0000680!7.39e-11!57;CL:0000056!7.39e-11!57;CL:0000355!7.39e-11!57;CL:0000393!2.79e-10!60;CL:0000211!2.79e-10!60;CL:0000055!2.08e-08!180;CL:1000449!3.42e-08!16;CL:0000077!2.44e-07!19;CL:1000413!4.42e-07!9;CL:1000497!5.32e-07!18;CL:0002518!5.32e-07!18 | ||
|ontology_enrichment_celltype_v019=CL:0002139;1.28e-15;24!CL:0000115;3.34e-14;36!CL:0000213;5.65e-12;58!CL:0000215;5.65e-12;58!CL:0000359;6.00e-12;32!CL:0000071;9.76e-12;18!CL:0002078;1.33e-11;45!CL:0000192;2.46e-10;43!CL:1000449;1.62e-08;15!CL:0000077;2.82e-07;19!CL:1000497;2.96e-07;17!CL:0002518;2.96e-07;17!CL:1000413;4.37e-07;9!CL:0000076;4.57e-07;63!CL:0002681;6.34e-07;12!CL:0002584;6.34e-07;12!CL:0000187;7.11e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,2.68e-32,121;CL:0002321,2.76e-24,250;CL:0000213,1.21e-21,58;CL:0000215,1.21e-21,58;CL:0000066,2.69e-18,253;CL:0002078,2.80e-17,45;CL:0000115,6.99e-17,36;CL:0002139,1.34e-15,24;CL:0000192,4.94e-14,43;CL:0000514,4.94e-14,43;CL:0000076,8.78e-13,63;CL:0000359,1.44e-12,32;CL:0000187,7.40e-12,55;CL:0000071,1.01e-11,18;CL:0002546,1.01e-11,18;CL:0000680,9.06e-11,58;CL:0000056,9.06e-11,58;CL:0000355,9.06e-11,58;CL:0000393,3.32e-10,61;CL:0000211,3.32e-10,61;CL:1000449,1.58e-08,15;CL:0000077,2.60e-07,19;CL:1000497,2.93e-07,17;CL:0002518,2.93e-07,17;CL:1000413,4.40e-07,9;CL:0002681,6.16e-07,12;CL:0002584,6.16e-07,12 | |||
|ontology_enrichment_development_v019=CL:0002546;9.76e-12;18!CL:0000514;2.46e-10;43!CL:0000222;4.85e-10;121 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0000055;4.23e-14;65!UBERON:0003914;6.12e-14;74!UBERON:0007500;6.82e-14;56!UBERON:0001981;6.82e-14;56!UBERON:0004537;6.82e-14;56!UBERON:0001637;1.07e-13;42!UBERON:0003509;1.07e-13;42!UBERON:0004572;1.07e-13;42!UBERON:0004573;3.94e-13;33!UBERON:0004571;3.94e-13;33!UBERON:0002049;1.59e-12;75!UBERON:0007798;1.59e-12;75!UBERON:0000487;7.58e-12;22!UBERON:0004638;9.76e-12;18!UBERON:0001986;9.76e-12;18!UBERON:0004852;9.76e-12;18!UBERON:0000490;1.13e-10;33!UBERON:0006914;1.63e-10;25!UBERON:0000025;7.03e-10;93!UBERON:0000947;2.72e-09;21!UBERON:0010191;2.72e-09;21!UBERON:0006555;1.62e-08;15!UBERON:0004819;1.62e-08;15!UBERON:0001285;1.62e-08;15!UBERON:0007684;1.62e-08;15!UBERON:0000119;6.86e-08;139!UBERON:0004111;1.61e-07;130!UBERON:0000483;2.46e-07;136!UBERON:0000353;3.45e-07;15!UBERON:0003915;4.37e-07;9!UBERON:0004700;4.37e-07;9!UBERON:0001917;4.37e-07;9!UBERON:0001225;6.34e-07;12!UBERON:0008987;6.34e-07;12!UBERON:0001009;6.69e-07;112!UBERON:0004535;7.35e-07;109 | |||
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| ||
|short_description=p1@HYI | |short_description=p1@HYI | ||
}} | }} |
Latest revision as of 04:40, 18 September 2015
Short description: | p1@HYI |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_HYI_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000372425, ENST00000372427, ENST00000372432, NM_001190880, NM_001243526, NM_031207, uc001cjn.2, uc001cjo.2_5end |
EntrezGene: | HYI |
HGNC: | 26948 |
UniProt: | Q5T013Q5T017 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 2.68e-32 | 121 |
embryonic cell | 2.76e-24 | 250 |
lining cell | 1.21e-21 | 58 |
barrier cell | 1.21e-21 | 58 |
epithelial cell | 2.69e-18 | 253 |
meso-epithelial cell | 2.80e-17 | 45 |
endothelial cell | 6.99e-17 | 36 |
endothelial cell of vascular tree | 1.34e-15 | 24 |
smooth muscle cell | 4.94e-14 | 43 |
smooth muscle myoblast | 4.94e-14 | 43 |
squamous epithelial cell | 8.78e-13 | 63 |
vascular associated smooth muscle cell | 1.44e-12 | 32 |
muscle cell | 7.40e-12 | 55 |
blood vessel endothelial cell | 1.01e-11 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.01e-11 | 18 |
muscle precursor cell | 9.06e-11 | 58 |
myoblast | 9.06e-11 | 58 |
multi-potent skeletal muscle stem cell | 9.06e-11 | 58 |
electrically responsive cell | 3.32e-10 | 61 |
electrically active cell | 3.32e-10 | 61 |
epithelial cell of nephron | 1.58e-08 | 15 |
mesothelial cell | 2.60e-07 | 19 |
kidney cell | 2.93e-07 | 17 |
kidney epithelial cell | 2.93e-07 | 17 |
endothelial cell of artery | 4.40e-07 | 9 |
kidney cortical cell | 6.16e-07 | 12 |
renal cortical epithelial cell | 6.16e-07 | 12 |