FFCP PHASE1:Hg19::chr1:43917566..43917577,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=81888 | |EntrezGene=81888 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26948 | |HGNC=26948 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-155bp_to_ENST00000483618_5end | |association_with_transcript=-155bp_to_ENST00000483618_5end | ||
|cluster_id=chr1:43917566..43917577,- | |||
|coexpression_cluster_id=C514 | |coexpression_cluster_id=C514 | ||
|description=CAGE_peak_6_at_HYI_5end | |description=CAGE_peak_6_at_HYI_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000115!2.29e-24!35;CL:0002139!2.97e-24!24;CL:0005020!6.86e-21!6;CL:0002138!6.86e-21!6;CL:0005022!6.86e-21!6;CL:0002078!5.42e-19!44;CL:0000213!5.74e-17!57;CL:0000215!5.74e-17!57;CL:0002195!5.41e-16!2;CL:0002571!5.41e-16!2;CL:1000413!1.15e-13!9;CL:0000071!2.74e-10!18;CL:0002546!2.74e-10!18;CL:0000222!7.70e-10!119;CL:0000864!5.70e-09!1;CL:0000091!5.70e-09!1 | |ontology_enrichment_celltype=CL:0000115!2.29e-24!35;CL:0002139!2.97e-24!24;CL:0005020!6.86e-21!6;CL:0002138!6.86e-21!6;CL:0005022!6.86e-21!6;CL:0002078!5.42e-19!44;CL:0000213!5.74e-17!57;CL:0000215!5.74e-17!57;CL:0002195!5.41e-16!2;CL:0002571!5.41e-16!2;CL:1000413!1.15e-13!9;CL:0000071!2.74e-10!18;CL:0002546!2.74e-10!18;CL:0000222!7.70e-10!119;CL:0000864!5.70e-09!1;CL:0000091!5.70e-09!1 | ||
|ontology_enrichment_celltype_v019=CL:0002138;9.96e-60;6!CL:0002596;5.69e-21;2!CL:0000115;1.36e-16;36!CL:0002139;1.07e-15;24!CL:0002078;7.33e-13;45!CL:0002188;3.22e-09;5!CL:1000746;6.04e-07;7!CL:1000612;6.04e-07;7!CL:0000213;6.66e-07;58!CL:0000215;6.66e-07;58 | |ontology_enrichment_celltype_v019=CL:0002138;9.96e-60;6!CL:0002596;5.69e-21;2!CL:0000115;1.36e-16;36!CL:0002139;1.07e-15;24!CL:0002078;7.33e-13;45!CL:0002188;3.22e-09;5!CL:1000746;6.04e-07;7!CL:1000612;6.04e-07;7!CL:0000213;6.66e-07;58!CL:0000215;6.66e-07;58 | ||
|ontology_enrichment_celltype_v019_2=CL:0005020,8.15e-60,6;CL:0002138,8.15e-60,6;CL:0005022,8.15e-60,6;CL:0002596,5.70e-21,2;CL:0000115,2.87e-18,36;CL:0002139,1.02e-15,24;CL:0002078,9.05e-15,45;CL:0000213,1.28e-11,58;CL:0000215,1.28e-11,58;CL:0002188,3.49e-09,5;CL:0000222,8.28e-09,121;CL:1000746,6.39e-07,7;CL:1000612,6.39e-07,7 | |||
|ontology_enrichment_development_v019=CL:0005022;9.96e-60;6 | |ontology_enrichment_development_v019=CL:0005022;9.96e-60;6 | ||
|ontology_enrichment_disease=DOID:3571!5.70e-09!1;DOID:4235!1.65e-08!1 | |ontology_enrichment_disease=DOID:3571!5.70e-09!1;DOID:4235!1.65e-08!1 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0001473;4.34e-45;8!UBERON:0004536;4.34e-45;8!UBERON:0006558;4.34e-45;8!UBERON:0002465;2.70e-36;10!UBERON:0005396;5.69e-21;2!UBERON:0002405;4.74e-14;27!UBERON:0002193;1.61e-09;42!UBERON:0000055;1.82e-08;65!UBERON:0000074;6.04e-07;7!UBERON:0001229;6.04e-07;7 | |ontology_enrichment_uberon_v019=UBERON:0001473;4.34e-45;8!UBERON:0004536;4.34e-45;8!UBERON:0006558;4.34e-45;8!UBERON:0002465;2.70e-36;10!UBERON:0005396;5.69e-21;2!UBERON:0002405;4.74e-14;27!UBERON:0002193;1.61e-09;42!UBERON:0000055;1.82e-08;65!UBERON:0000074;6.04e-07;7!UBERON:0001229;6.04e-07;7 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001473,3.73e-45,8;UBERON:0004536,3.73e-45,8;UBERON:0006558,3.73e-45,8;UBERON:0002465,2.40e-36,10;UBERON:0005396,5.70e-21,2;UBERON:0000055,5.09e-10,68;UBERON:0002049,8.14e-09,78;UBERON:0007798,8.14e-09,78;UBERON:0010532,6.39e-07,7;UBERON:0000074,6.39e-07,7;UBERON:0001229,6.39e-07,7;UBERON:0001230,6.39e-07,7;UBERON:0003220,6.39e-07,7;UBERON:0005749,6.39e-07,7;UBERON:0004199,6.39e-07,7;UBERON:0004209,6.39e-07,7;UBERON:0004198,6.39e-07,7 | |||
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|short_description=p6@HYI | |short_description=p6@HYI | ||
}} | }} |
Latest revision as of 04:37, 18 September 2015
Short description: | p6@HYI |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_HYI_5end |
Coexpression cluster: | C514_Lymphatic_Endothelial_mycosis_appendix_heart_CD14_migratory |
Association with transcript: | -155bp_to_ENST00000483618_5end |
EntrezGene: | HYI |
HGNC: | 26948 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphangioblast | 8.15e-60 | 6 |
endothelial cell of lymphatic vessel | 8.15e-60 | 6 |
vascular lymphangioblast | 8.15e-60 | 6 |
smooth muscle cell of the carotid artery | 5.70e-21 | 2 |
endothelial cell | 2.87e-18 | 36 |
endothelial cell of vascular tree | 1.02e-15 | 24 |
meso-epithelial cell | 9.05e-15 | 45 |
lining cell | 1.28e-11 | 58 |
barrier cell | 1.28e-11 | 58 |
glomerular endothelial cell | 3.49e-09 | 5 |
mesodermal cell | 8.28e-09 | 121 |
glomerular cell | 6.39e-07 | 7 |
kidney corpuscule cell | 6.39e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
lymphatic vessel | 3.73e-45 | 8 |
lymph vasculature | 3.73e-45 | 8 |
lymphatic part of lymphoid system | 3.73e-45 | 8 |
lymphoid system | 2.40e-36 | 10 |
carotid artery segment | 5.70e-21 | 2 |
vessel | 5.09e-10 | 68 |
vasculature | 8.14e-09 | 78 |
vascular system | 8.14e-09 | 78 |
primitive nephron | 6.39e-07 | 7 |
renal glomerulus | 6.39e-07 | 7 |
renal corpuscle | 6.39e-07 | 7 |
glomerular capsule | 6.39e-07 | 7 |
metanephric mesenchyme | 6.39e-07 | 7 |
glomerular tuft | 6.39e-07 | 7 |
S-shaped body | 6.39e-07 | 7 |
renal vesicle | 6.39e-07 | 7 |
comma-shaped body | 6.39e-07 | 7 |