FFCP PHASE1:Hg19::chr9:91793707..91793718,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr9:91793707..91793718,- to FFCP PHASE1:Hg19::chr9:91793707..91793718,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=53358 | |EntrezGene=53358 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18181 | |HGNC=18181 | ||
|TSSclassifier=strong | |||
|UniProt=Q5T7I8,Q92529 | |UniProt=Q5T7I8,Q92529 | ||
|association_with_transcript=-25bp_to_ENST00000375830,ENST00000375835,NM_016848,uc004aqg.2_5end | |||
|cluster_id=chr9:91793707..91793718,- | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_5_at_SHC3_5end | |||
|id=chr9:91793707..91793718,- | |||
|ontology_enrichment_celltype=CL:0000393!1.37e-09!60;CL:0000211!1.37e-09!60;CL:0000047!4.67e-09!8;CL:0000192!3.09e-07!42;CL:0000514!3.09e-07!42;CL:0002319!4.00e-07!25;CL:0000540!5.15e-07!6;CL:0000031!5.15e-07!6;CL:0000404!5.15e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000047;3.75e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,1.07e-10,8 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.59e-09;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.73e-37!82;UBERON:0005743!6.42e-36!86;UBERON:0000073!7.14e-36!94;UBERON:0001016!7.14e-36!94;UBERON:0001049!3.53e-30!57;UBERON:0005068!3.53e-30!57;UBERON:0006241!3.53e-30!57;UBERON:0007135!3.53e-30!57;UBERON:0001869!3.05e-29!32;UBERON:0002020!8.68e-29!34;UBERON:0003528!8.68e-29!34;UBERON:0002616!9.17e-29!59;UBERON:0001893!1.21e-28!34;UBERON:0000955!2.21e-28!69;UBERON:0006238!2.21e-28!69;UBERON:0002791!1.58e-27!33;UBERON:0002780!4.68e-27!41;UBERON:0001890!4.68e-27!41;UBERON:0006240!4.68e-27!41;UBERON:0000956!7.20e-27!25;UBERON:0000203!7.20e-27!25;UBERON:0003075!7.76e-27!86;UBERON:0007284!7.76e-27!86;UBERON:0003080!4.24e-26!42;UBERON:0002346!9.58e-25!90;UBERON:0002619!9.93e-25!22;UBERON:0003056!3.29e-24!61;UBERON:0001950!1.80e-22!20;UBERON:0000033!1.96e-22!123;UBERON:0004121!3.77e-22!169;UBERON:0000924!5.04e-21!173;UBERON:0006601!5.04e-21!173;UBERON:0000025!1.28e-20!194;UBERON:0000153!2.36e-20!129;UBERON:0007811!2.36e-20!129;UBERON:0004111!8.21e-17!241;UBERON:0000483!6.18e-16!309;UBERON:0000119!6.53e-16!312;UBERON:0000477!2.21e-15!286;UBERON:0000475!1.73e-13!365;UBERON:0000481!6.86e-13!347;UBERON:0000922!1.82e-10!612;UBERON:0000064!1.79e-09!219;UBERON:0000923!4.27e-09!604;UBERON:0005291!4.27e-09!604;UBERON:0006598!4.27e-09!604;UBERON:0002532!4.27e-09!604;UBERON:0002050!5.24e-09!605;UBERON:0005423!5.24e-09!605;UBERON:0000468!7.07e-09!659;UBERON:0007023!1.60e-08!115;UBERON:0000200!2.10e-08!6;UBERON:0001871!5.41e-08!7;UBERON:0000467!2.51e-07!625;UBERON:0001872!2.54e-07!5;UBERON:0000349!2.63e-07!5;UBERON:0000480!3.02e-07!626;UBERON:0002021!5.84e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;2.76e-75;22!UBERON:0001950;3.84e-68;20!UBERON:0000956;6.48e-66;25!UBERON:0000203;6.48e-66;25!UBERON:0001869;2.35e-63;32!UBERON:0002791;6.47e-59;32!UBERON:0001893;7.22e-58;34!UBERON:0003528;1.10e-57;34!UBERON:0002020;1.10e-57;34!UBERON:0002780;2.40e-44;41!UBERON:0001890;2.40e-44;41!UBERON:0000073;1.17e-30;53!UBERON:0002616;1.17e-30;53!UBERON:0000955;1.91e-25;68!UBERON:0001017;4.50e-25;75!UBERON:0000200;8.85e-23;6!UBERON:0001872;1.57e-19;5!UBERON:0000349;1.86e-19;5!UBERON:0001871;2.96e-19;6!UBERON:0001016;1.15e-18;83!UBERON:0002021;3.12e-18;5!UBERON:0001870;1.74e-12;3!UBERON:0002420;1.97e-10;9!UBERON:0007245;1.97e-10;9!UBERON:0010009;1.97e-10;9!UBERON:0010011;1.97e-10;9!UBERON:0000454;1.97e-10;9!UBERON:0001876;5.56e-09;2!UBERON:0000369;5.95e-09;4!UBERON:0002435;5.95e-09;4!UBERON:0000204;5.95e-09;4!UBERON:0002702;7.70e-09;2!UBERON:0011216;8.03e-09;132!UBERON:0001954;1.06e-08;2!UBERON:0003022;1.06e-08;2!UBERON:0002421;1.06e-08;2!UBERON:0002600;1.06e-08;2!UBERON:0002771;1.55e-08;2!UBERON:0007023;2.83e-07;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002619,1.66e-75,22;UBERON:0001869,4.62e-72,32;UBERON:0001950,2.32e-68,20;UBERON:0001893,1.52e-67,34;UBERON:0003528,3.29e-67,34;UBERON:0002020,3.29e-67,34;UBERON:0002791,2.41e-66,32;UBERON:0000956,4.15e-66,25;UBERON:0000203,4.15e-66,25;UBERON:0002780,3.11e-64,41;UBERON:0001890,3.11e-64,41;UBERON:0003080,3.11e-64,41;UBERON:0006240,3.11e-64,41;UBERON:0001017,1.09e-62,81;UBERON:0001016,1.30e-55,89;UBERON:0000073,1.47e-55,53;UBERON:0002616,1.47e-55,53;UBERON:0000955,5.79e-54,68;UBERON:0006238,5.79e-54,68;UBERON:0001049,3.19e-52,56;UBERON:0005068,3.19e-52,56;UBERON:0006241,3.19e-52,56;UBERON:0007135,3.19e-52,56;UBERON:0003056,4.01e-41,61;UBERON:0003075,2.03e-33,82;UBERON:0007284,2.03e-33,82;UBERON:0002346,1.58e-31,86;UBERON:0010371,1.03e-26,104;UBERON:0004121,2.00e-26,171;UBERON:0000924,2.00e-26,171;UBERON:0006601,2.00e-26,171;UBERON:0000200,6.87e-23,6;UBERON:0007023,2.47e-22,114;UBERON:0011216,1.77e-20,223;UBERON:0010314,1.49e-19,132;UBERON:0001872,1.61e-19,5;UBERON:0000349,1.80e-19,5;UBERON:0001871,2.35e-19,6;UBERON:0002021,2.15e-18,5;UBERON:0000025,3.75e-16,192;UBERON:0001870,1.96e-12,3;UBERON:0004111,3.75e-12,240;UBERON:0002420,1.67e-10,9;UBERON:0007245,1.67e-10,9;UBERON:0010009,1.67e-10,9;UBERON:0010011,1.67e-10,9;UBERON:0000454,1.67e-10,9;UBERON:0000483,4.29e-09,306;UBERON:0000369,4.74e-09,4;UBERON:0002435,4.74e-09,4;UBERON:0000204,4.74e-09,4;UBERON:0010082,4.74e-09,4;UBERON:0001876,5.58e-09,2;UBERON:0000119,6.39e-09,309;UBERON:0002702,9.16e-09,2;UBERON:0002771,9.89e-09,2;UBERON:0001954,1.07e-08,2;UBERON:0003022,1.07e-08,2;UBERON:0002421,1.07e-08,2;UBERON:0002600,1.07e-08,2 | |||
|phase1_expression=0.181678379270557,0,0.140954404095971,0,0,0,0,0,0,0.737201809504527,1.39560233594486,0,0,0.123766352960047,0,0.672325146451775,0,0.730310090387373,0.487932798790507,0.123121058076788,0,0.313454721478088,0.85870796139317,0.273748850145768,0.627713197974014,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.661743720148475,0.665188192387692,0.614843499851882,0.523916301990851,0,0,0,0,0,0,0,0,0,0,0.347140501607594,1.13061588384802,1.25849830862972,0.550236083880135,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.633152558322899,1.19168262731897,0.573673241497627,0.709336764396714,0.560677600142307,0,0.74000264525148,0,0.134710672069688,0.653847612453835,0,0,0,0.624320153660641,0,0.448346041655403,0,0,0,0.408308342509787,0.122834317311768,0.516628905878827,0,0,0,0,0,0.250237039743928,0,0,0,0,0.794025282120147,0,0,0,0,0,0,0,0.168776332241266,0,0,0.0920498986422993,0,0,0,0,0,0,0,0.365921118388786,0,0.232387885739037,0.621966330092223,0.504641701751257,0.36497735907583,0,0,0,0,1.44375896333917,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0.0925884451585296,0,0,0,0.34779121492523,0.469634776943287,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0,1.55126058909333,0,0,0.531876233169741,0,0,0,0,0.285955987316295,0,0.823240336780769,0.325736184293735,0,0.791951872933429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.03275699377971,1.30139853857622,0.773288812777695,1.50764638800914,1.27587750330633,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0.260650843404249,0,0,0,0,0,0,0,0,0,0.153461973288062,0.280660094433074,0.384417447767103,0,0,0,0,0,0.0821271560138091,0.519254429183621,0,0,0,0,0,0,0.786746489756545,1.35359883872224,0.0770153371044148,0,0,0.105551628892876,0,0,0.647747748306418,0,0.270946437543853,0,0,0,0.447749509444357,0,0,0.256450125116389,0,0,0,0,0,0,0,1.6068392984416,0,0,0.15350367472613,0.275673144969061,0,0,0.170453254832202,0.0890320356467374,0,0,0,0,0,0.62962469366128,0,0.924100740528266,1.06461206063404,0,0,0.572499546967965,0,0.316379424718726,1.14378116354295,0.767693373934002,0,0,0,0,0.274537029736055,0.117812402345686,0.202182481573316,0,0.421258456238981,0.48763373908959,0,0,0.136499911407986,0.282810863907425,0,0,0.66343897524122,0.438450885253763,0,0.655894752046633,0,0.30982349809975,0.845086807596724,0.430234056612155,0.491245205065606,0,0,0,0,0.379473173765715,0.349934720244983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307160702099232,4.97073823883149,4.07941307590487,0,0,0,0,0,0,0.102268682502155,0.984678443688556,0,0.0898683511473268,0,0,0,0,0,1.93866549219044,3.33965153382665,3.99227596002388,0,0,0,0,0,0,0,0,0,0,1.5677537021303,0,0.110579259931225,0.591095237907095,2.85201016300164,0,0,0,0,0,0,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404406797884062,0,1.40558667435203,0,0,0.971121518136371,0,0,1.22429104652196,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0.687944129886466,0,0,0,0,0,0.225980740780532,0,0.19871461170299,4.43175571691151,0,0,0,0,0.144090417154106,0,0,0,0.124252535565433,0,0,0,0,0.288950589901519,0,0.410716136675979,0,0,0,0,0,0,0,0,0,0,0.360299883542404,0,0,0,0,0.295282444544246,0.254019996197353,3.97614844904652,3.26888174667781,1.12527203925513,0.550157746388935,0.83088067605837,0.2249738915515,0,6.68245123238271,0,0,0.157363764404994,0,0,0,0,0,0,0,0.864221491201268,0,0,0,0.170388021785422,0.113312091520126,0.146552233678082,0,1.29282956361551,0.79339561045614,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,4.43034089983493,6.34536577490208,3.254964198369,0,0.332787154610557,0.496771223531068,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15543720058278,0,0.318593534327405,0,0.310525913752519,0.414706207840855,0.265841714557995,0.521745061811734,0.300515217994437,1.52322084867518,0.406870733204662,0.363697318405119,0.107410557042488,0.464033759878494,0,0,0,0,0,0,0,0,1.13352962756136,0.694567422971502,0,0,0,0,0,0.38582807654183,0,0,0,0.303859956177382,1.65910123382077,0,0,0,0,0,0,0,0.106691729694141,0,0,0.184105950251841,0,0,0,0.754773679776773,0,0.764467467344097,0,0,0,0,0,0,0,0,0,3.78952428069111,1.41696576325585,1.43670473151436,3.89721092057435,2.52071696221718,3.73449163306777,5.81312324274664,0,0,0.11796972334774,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,3.7821047386301,2.34323429584154,3.9270491335225,4.18544347279785,5.4697480901822,0,0,0,0,0,0,0,0,0,0,0.342976018874837,1.08751572762931,4.27523028158519,0,0,0,3.29942738823604,0,0,0,0,0,0,0,0,0,0,0,0,0,0.709992004383392,0.596493833314104,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41095188908457,0,0.235676547101626,0.392616934229891,0,0.4226557275834,0,0,0,0,0,0,0.0802413666891683,0,0.458729283404541,0,0,5.84726815641866,2.18175345170189,1.0580536810308,0,0,0,0,0.218531143927391,0,1.52983244612973,0.267217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| ||
|short_description=p5@SHC3 | |||
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Latest revision as of 04:29, 18 September 2015
Short description: | p5@SHC3 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_SHC3_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | -25bp_to_ENST00000375830, ENST00000375835, NM_016848, uc004aqg.2_5end |
EntrezGene: | SHC3 |
HGNC: | 18181 |
UniProt: | Q5T7I8Q92529 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 1.07e-10 | 8 |