FFCP PHASE1:Hg19::chr5:54455989..54456019,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=493869 | |EntrezGene=493869 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=33100 | |HGNC=33100 | ||
|TSSclassifier=strong | |||
|UniProt=Q8TED1,E7ETY7 | |UniProt=Q8TED1,E7ETY7 | ||
|association_with_transcript=0bp_to_ENST00000296734,ENST00000502733,ENST00000506123,ENST00000511617,ENST00000514317,ENST00000515370,uc003jps.2,uc003jpt.2_5end | |association_with_transcript=0bp_to_ENST00000296734,ENST00000502733,ENST00000506123,ENST00000511617,ENST00000514317,ENST00000515370,uc003jps.2,uc003jpt.2_5end | ||
|cluster_id=chr5:54455989..54456019,+ | |||
|coexpression_cluster_id=C811 | |coexpression_cluster_id=C811 | ||
|description=CAGE_peak_1_at_GPX8_5end | |description=CAGE_peak_1_at_GPX8_5end | ||
|id=chr5:54455989..54456019,+ | |id=chr5:54455989..54456019,+ | ||
|ontology_enrichment_celltype=CL:0000055!1.83e-44!180;CL:0000057!2.43e-22!75;CL:0000222!5.97e-17!119;CL:0000680!1.69e-16!57;CL:0000056!1.69e-16!57;CL:0000355!1.69e-16!57;CL:0002321!2.36e-16!248;CL:0000220!2.95e-16!246;CL:0000187!1.52e-15!54;CL:0000393!1.80e-14!60;CL:0000211!1.80e-14!60;CL:0000183!7.27e-14!59;CL:0000548!1.80e-13!679;CL:0000004!1.80e-13!679;CL:0000255!1.80e-13!679;CL:0000012!1.45e-12!682;CL:0000192!1.87e-12!42;CL:0000514!1.87e-12!42;CL:0002620!1.76e-10!23;CL:0000359!7.18e-10!32;CL:0000144!1.70e-09!625;CL:0002334!7.20e-08!12;CL:0002371!1.17e-07!591;CL:0000499!2.11e-07!27 | |ontology_enrichment_celltype=CL:0000055!1.83e-44!180;CL:0000057!2.43e-22!75;CL:0000222!5.97e-17!119;CL:0000680!1.69e-16!57;CL:0000056!1.69e-16!57;CL:0000355!1.69e-16!57;CL:0002321!2.36e-16!248;CL:0000220!2.95e-16!246;CL:0000187!1.52e-15!54;CL:0000393!1.80e-14!60;CL:0000211!1.80e-14!60;CL:0000183!7.27e-14!59;CL:0000548!1.80e-13!679;CL:0000004!1.80e-13!679;CL:0000255!1.80e-13!679;CL:0000012!1.45e-12!682;CL:0000192!1.87e-12!42;CL:0000514!1.87e-12!42;CL:0002620!1.76e-10!23;CL:0000359!7.18e-10!32;CL:0000144!1.70e-09!625;CL:0002334!7.20e-08!12;CL:0002371!1.17e-07!591;CL:0000499!2.11e-07!27 | ||
|ontology_enrichment_celltype_v019=CL:0002620;1.50e-10;23!CL:0000057;1.78e-09;73!CL:0000192;2.32e-09;43!CL:0000359;2.50e-09;32!CL:0000187;3.58e-09;55!CL:0000134;4.43e-09;55!CL:0002320;2.26e-08;188!CL:0000723;2.53e-08;61!CL:0000393;2.88e-08;61!CL:0000211;2.88e-08;61!CL:0000048;3.96e-08;58!CL:0002334;6.50e-08;12!CL:0000499;6.71e-08;28 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,4.44e-23,76;CL:0000222,4.06e-17,121;CL:0000680,6.32e-17,58;CL:0000056,6.32e-17,58;CL:0000355,6.32e-17,58;CL:0002321,1.59e-16,250;CL:0000187,5.81e-16,55;CL:0000393,7.07e-15,61;CL:0000211,7.07e-15,61;CL:0000192,7.60e-13,43;CL:0000514,7.60e-13,43;CL:0002620,1.51e-10,23;CL:0000359,6.26e-10,32;CL:0002334,6.48e-08,12;CL:0000499,6.67e-08,28 | |||
|ontology_enrichment_development_v019=CL:0000514;2.32e-09;43!CL:0000355;4.41e-09;58 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!2.08e-19!83;UBERON:0002329!2.08e-19!83;UBERON:0003077!2.08e-19!83;UBERON:0003059!2.08e-19!83;UBERON:0007282!2.08e-19!83;UBERON:0009618!2.08e-19!83;UBERON:0007285!2.08e-19!83;UBERON:0004290!1.39e-16!70;UBERON:0000486!3.39e-16!82;UBERON:0005256!1.16e-15!143;UBERON:0002100!3.26e-15!216;UBERON:0001134!5.89e-15!61;UBERON:0002036!5.89e-15!61;UBERON:0003082!5.89e-15!61;UBERON:0002385!3.21e-14!63;UBERON:0001015!3.21e-14!63;UBERON:0000383!3.21e-14!63;UBERON:0000490!2.32e-13!138;UBERON:0000475!7.88e-13!365;UBERON:0003104!7.18e-12!238;UBERON:0009142!7.18e-12!238;UBERON:0000468!1.39e-11!659;UBERON:0004872!1.52e-11!84;UBERON:0003102!1.58e-11!95;UBERON:0002049!2.53e-11!79;UBERON:0007798!2.53e-11!79;UBERON:0002199!1.07e-09!45;UBERON:0002416!1.07e-09!45;UBERON:0000481!1.96e-09!347;UBERON:0001637!1.98e-09!42;UBERON:0003509!1.98e-09!42;UBERON:0004572!1.98e-09!42;UBERON:0001981!5.37e-09!60;UBERON:0007500!5.37e-09!60;UBERON:0004537!5.37e-09!60;UBERON:0006965!5.37e-09!60;UBERON:0003914!6.87e-09!118;UBERON:0004573!8.09e-09!33;UBERON:0004571!8.09e-09!33;UBERON:0000055!1.50e-08!69;UBERON:0002097!2.18e-08!40;UBERON:0004923!7.79e-08!57;UBERON:0000467!1.50e-07!625;UBERON:0004535!2.35e-07!110;UBERON:0000480!2.47e-07!626;UBERON:0001009!5.59e-07!113;UBERON:0000119!6.51e-07!312 | |ontology_enrichment_uberon=UBERON:0000914!2.08e-19!83;UBERON:0002329!2.08e-19!83;UBERON:0003077!2.08e-19!83;UBERON:0003059!2.08e-19!83;UBERON:0007282!2.08e-19!83;UBERON:0009618!2.08e-19!83;UBERON:0007285!2.08e-19!83;UBERON:0004290!1.39e-16!70;UBERON:0000486!3.39e-16!82;UBERON:0005256!1.16e-15!143;UBERON:0002100!3.26e-15!216;UBERON:0001134!5.89e-15!61;UBERON:0002036!5.89e-15!61;UBERON:0003082!5.89e-15!61;UBERON:0002385!3.21e-14!63;UBERON:0001015!3.21e-14!63;UBERON:0000383!3.21e-14!63;UBERON:0000490!2.32e-13!138;UBERON:0000475!7.88e-13!365;UBERON:0003104!7.18e-12!238;UBERON:0009142!7.18e-12!238;UBERON:0000468!1.39e-11!659;UBERON:0004872!1.52e-11!84;UBERON:0003102!1.58e-11!95;UBERON:0002049!2.53e-11!79;UBERON:0007798!2.53e-11!79;UBERON:0002199!1.07e-09!45;UBERON:0002416!1.07e-09!45;UBERON:0000481!1.96e-09!347;UBERON:0001637!1.98e-09!42;UBERON:0003509!1.98e-09!42;UBERON:0004572!1.98e-09!42;UBERON:0001981!5.37e-09!60;UBERON:0007500!5.37e-09!60;UBERON:0004537!5.37e-09!60;UBERON:0006965!5.37e-09!60;UBERON:0003914!6.87e-09!118;UBERON:0004573!8.09e-09!33;UBERON:0004571!8.09e-09!33;UBERON:0000055!1.50e-08!69;UBERON:0002097!2.18e-08!40;UBERON:0004923!7.79e-08!57;UBERON:0000467!1.50e-07!625;UBERON:0004535!2.35e-07!110;UBERON:0000480!2.47e-07!626;UBERON:0001009!5.59e-07!113;UBERON:0000119!6.51e-07!312 | ||
|ontology_enrichment_uberon_v019=UBERON:0004573;2.88e-08;33!UBERON:0004571;2.88e-08;33!UBERON:0002384;5.57e-08;198!UBERON:0001637;5.06e-07;42!UBERON:0003509;5.06e-07;42!UBERON:0004572;5.06e-07;42!UBERON:0002199;7.12e-07;46!UBERON:0002416;7.12e-07;46!UBERON:0002097;8.20e-07;41 | |||
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| ||
|short_description=p1@GPX8 | |short_description=p1@GPX8 | ||
}} | }} |
Latest revision as of 03:54, 18 September 2015
Short description: | p1@GPX8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_GPX8_5end |
Coexpression cluster: | C811_Smooth_Fibroblast_Preadipocyte_Chondrocyte_hepatic_basal_Adipocyte |
Association with transcript: | 0bp_to_ENST00000296734, ENST00000502733, ENST00000506123, ENST00000511617, ENST00000514317, ENST00000515370, uc003jps.2, uc003jpt.2_5end |
EntrezGene: | GPX8 |
HGNC: | 33100 |
UniProt: | Q8TED1E7ETY7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 4.44e-23 | 76 |
mesodermal cell | 4.06e-17 | 121 |
muscle precursor cell | 6.32e-17 | 58 |
myoblast | 6.32e-17 | 58 |
multi-potent skeletal muscle stem cell | 6.32e-17 | 58 |
embryonic cell | 1.59e-16 | 250 |
muscle cell | 5.81e-16 | 55 |
electrically responsive cell | 7.07e-15 | 61 |
electrically active cell | 7.07e-15 | 61 |
smooth muscle cell | 7.60e-13 | 43 |
smooth muscle myoblast | 7.60e-13 | 43 |
skin fibroblast | 1.51e-10 | 23 |
vascular associated smooth muscle cell | 6.26e-10 | 32 |
preadipocyte | 6.48e-08 | 12 |
stromal cell | 6.67e-08 | 28 |