FFCP PHASE1:Hg19::chr2:171673428..171673436,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2571 | |EntrezGene=2571 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4092 | |HGNC=4092 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=6bp_to_ENST00000344257_5end | |association_with_transcript=6bp_to_ENST00000344257_5end | ||
|cluster_id=chr2:171673428..171673436,+ | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_4_at_GAD1_5end | |description=CAGE_peak_4_at_GAD1_5end | ||
|id=chr2:171673428..171673436,+ | |id=chr2:171673428..171673436,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.32e-09;82!UBERON:0010122;4.24e-07;2 | |||
|ontology_enrichment_disease=DOID:305!1.27e-19!106;DOID:0050687!1.36e-16!143;DOID:162!4.63e-12!235;DOID:14566!1.18e-11!239 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!8.21e-32!57;UBERON:0005068!8.21e-32!57;UBERON:0006241!8.21e-32!57;UBERON:0007135!8.21e-32!57;UBERON:0002780!2.17e-29!41;UBERON:0001890!2.17e-29!41;UBERON:0006240!2.17e-29!41;UBERON:0003080!2.66e-28!42;UBERON:0001017!3.67e-28!82;UBERON:0005743!1.11e-26!86;UBERON:0000955!3.05e-26!69;UBERON:0006238!3.05e-26!69;UBERON:0002616!1.38e-25!59;UBERON:0001893!4.03e-24!34;UBERON:0002020!4.46e-24!34;UBERON:0003528!4.46e-24!34;UBERON:0002791!3.90e-23!33;UBERON:0001869!5.63e-23!32;UBERON:0000073!5.85e-22!94;UBERON:0001016!5.85e-22!94;UBERON:0002619!5.74e-20!22;UBERON:0003075!2.48e-19!86;UBERON:0007284!2.48e-19!86;UBERON:0001950!1.97e-18!20;UBERON:0002346!1.41e-17!90;UBERON:0000956!1.58e-16!25;UBERON:0000203!1.58e-16!25;UBERON:0003056!2.07e-16!61;UBERON:0007023!7.73e-16!115;UBERON:0000033!3.44e-13!123;UBERON:0000153!1.32e-12!129;UBERON:0007811!1.32e-12!129;UBERON:0002420!1.27e-09!9;UBERON:0007245!1.27e-09!9;UBERON:0010009!1.27e-09!9;UBERON:0010011!1.27e-09!9;UBERON:0000454!1.27e-09!9;UBERON:0002308!3.70e-09!9;UBERON:0000125!3.70e-09!9;UBERON:0004121!1.32e-08!169;UBERON:0000924!5.80e-08!173;UBERON:0006601!5.80e-08!173;UBERON:0009663!9.13e-08!7;UBERON:0000062!2.09e-07!511;UBERON:0001737!2.86e-07!9;UBERON:0000200!9.48e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;6.73e-47;32!UBERON:0002791;2.56e-43;32!UBERON:0002619;7.82e-43;22!UBERON:0001950;1.12e-42;20!UBERON:0001893;1.16e-42;34!UBERON:0003528;4.90e-41;34!UBERON:0002020;4.90e-41;34!UBERON:0002780;8.79e-38;41!UBERON:0001890;8.79e-38;41!UBERON:0000956;2.86e-37;25!UBERON:0000203;2.86e-37;25!UBERON:0000073;4.42e-26;53!UBERON:0002616;4.42e-26;53!UBERON:0001017;4.42e-20;75!UBERON:0000955;1.00e-19;68!UBERON:0001016;3.82e-18;83!UBERON:0002420;3.77e-16;9!UBERON:0007245;3.77e-16;9!UBERON:0010009;3.77e-16;9!UBERON:0010011;3.77e-16;9!UBERON:0000454;3.77e-16;9!UBERON:0002021;1.07e-15;5!UBERON:0001872;5.66e-15;5!UBERON:0000369;4.47e-13;4!UBERON:0002435;4.47e-13;4!UBERON:0000204;4.47e-13;4!UBERON:0000125;7.55e-12;9!UBERON:0002308;7.55e-12;9!UBERON:0009663;3.25e-11;7!UBERON:0001871;1.02e-10;6!UBERON:0005383;3.93e-10;3!UBERON:0005382;3.93e-10;3!UBERON:0000349;9.35e-10;5!UBERON:0000200;1.90e-08;6!UBERON:0007023;2.84e-08;114!UBERON:0001873;4.24e-07;2!UBERON:0011216;5.02e-07;132!UBERON:0001876;6.33e-07;2!UBERON:0001894;7.07e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002780,1.40e-53,41;UBERON:0001890,1.40e-53,41;UBERON:0003080,1.40e-53,41;UBERON:0006240,1.40e-53,41;UBERON:0001869,9.37e-52,32;UBERON:0000073,4.24e-49,53;UBERON:0002616,4.24e-49,53;UBERON:0001049,5.06e-49,56;UBERON:0005068,5.06e-49,56;UBERON:0006241,5.06e-49,56;UBERON:0007135,5.06e-49,56;UBERON:0001893,2.22e-48,34;UBERON:0003528,7.15e-48,34;UBERON:0002020,7.15e-48,34;UBERON:0002791,2.69e-47,32;UBERON:0002619,6.13e-43,22;UBERON:0001950,1.05e-42,20;UBERON:0001017,1.59e-42,81;UBERON:0000955,2.83e-41,68;UBERON:0006238,2.83e-41,68;UBERON:0000956,2.31e-37,25;UBERON:0000203,2.31e-37,25;UBERON:0001016,2.43e-37,89;UBERON:0003056,1.33e-33,61;UBERON:0003075,9.38e-31,82;UBERON:0007284,9.38e-31,82;UBERON:0002346,6.42e-29,86;UBERON:0010371,2.08e-22,104;UBERON:0011216,2.36e-21,223;UBERON:0007023,1.10e-18,114;UBERON:0010314,4.29e-17,132;UBERON:0002420,2.49e-16,9;UBERON:0007245,2.49e-16,9;UBERON:0010009,2.49e-16,9;UBERON:0010011,2.49e-16,9;UBERON:0000454,2.49e-16,9;UBERON:0002021,1.65e-15,5;UBERON:0001872,4.92e-15,5;UBERON:0004121,5.69e-15,171;UBERON:0000924,5.69e-15,171;UBERON:0006601,5.69e-15,171;UBERON:0000025,2.43e-13,192;UBERON:0000369,4.17e-13,4;UBERON:0002435,4.17e-13,4;UBERON:0000204,4.17e-13,4;UBERON:0010082,4.17e-13,4;UBERON:0000125,8.11e-12,9;UBERON:0002308,8.11e-12,9;UBERON:0009663,2.94e-11,7;UBERON:0001871,6.23e-11,6;UBERON:0005383,4.00e-10,3;UBERON:0005382,4.00e-10,3;UBERON:0000349,5.40e-10,5;UBERON:0004111,1.70e-09,240;UBERON:0000200,2.49e-08,6;UBERON:0001876,4.25e-07,2;UBERON:0001873,4.25e-07,2;UBERON:0010122,4.25e-07,2;UBERON:0001894,6.98e-07,7;UBERON:0006222,6.98e-07,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223915474239924,0,0.257575567634187,0.290796477559129,0,0,0,0,0,0.575384784644301,0,0,0.344745680736619,0,0,0,0.272906150057846,0,0.306083892370903,0,0,0.329851300186716,0,0.426224750532694,0,0,0,0.251248665256743,0,0.217188844705117,0,0,0,0,0,0,0,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.523916301990851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0.89694817844431,0.213557388818567,0,0,0,0,0.18611685633159,0.168776332241266,0,0.252433774244115,0.0920498986422993,0,0,0.10075209822764,0,0.193260853163297,0,0.573609190778008,0.365921118388786,0.265059536642971,0.348581828608555,0.207322110030741,0.252320850875628,0.36497735907583,0,0,0,0,0,1.41968160047813,0.674338760312407,0.482022059766964,0.441175890929576,0.653638332277218,1.18635309555548,0.404493924480493,1.17732879075208,0.38474715694639,0,0,0,0,0,0,0,0,0.491953754172454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.858486162094873,0.246217006087397,0,0,0,0.16798212819886,0.141775097242386,0,0,0,0,0,0,0.144119953416961,0,0.063497894292169,0,0,0,0.205654985406647,0,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,0.502257091432126,0,0,0,0,0,0,0,0,0,0,0,2.54094624222463,0,0,0.502548796003046,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303127571446259,0,0,0.248107807818777,0.153461973288062,0,0,0,0,0,0,0,0,0,0,1.69203229428271,0.601519410909855,0.736647911487171,0,0,0,0,0.0770153371044148,0,0,0.211103257785751,0,0,0,0,0,0,0,0,0,0.657779629937804,0.784306353074702,0,0,0,0,0.27470839445503,0.41254749960294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0,0,0,0,0,0.35667105148125,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0.854592569019785,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03051603426729,0,0,0,0.19538809540204,0.278406173895242,0,0.811367035427949,0.33307196799782,2.81974010175699,2.8071081061233,0,0,0,1.13654458722565,0,0,0,4.97073823883149,1.68803299692615,0.333926115068718,0.329607748453519,0,0.19924798825107,0,0.251932747854276,0,0.369254416383208,0.311039587661807,0.0898683511473268,0,0,0,0,0,0.969332746095218,4.26733251544516,3.99227596002388,0.260427761085233,0,0,0,1.01701460117107,0,0.344743373241465,1.45802306691627,0.520874984799877,2.65722415744152,3.25610384288601,3.05163472634166,0.884634079449797,2.06883333267483,2.4132393686937,0,0.41827123283581,0.153900517007594,0,0,0,0.108647371922008,0,0,0,0,0.156980256395025,1.99454018280188,0,0.19606253431774,0.335643173951685,0,0.158936578980379,0.421996129056054,1.63232808159148,0.706765357169704,0,0,0,0,3.26173241548684,2.22415090103705,2.71497068714184,0.404406797884062,0,3.51396668588009,0,0.586993856796269,0.242780379534093,0,0,2.75465485467441,0.189559738885464,0.751617097072463,0.518440956986236,0.664653872707185,0.330991955875499,0.313932918407225,1.19472429772959,0,0.277349346026277,0.173559738335131,0,1.04471047896483,0.17472666824203,0,0.290268993867255,0.146178634172371,0.246346371159628,0,0,0.451961481561065,0,0.19871461170299,3.67202616544096,0.195551382734803,0.480952921509202,0,0.39961921916426,0.432271251462318,2.29073192331831,0.686379991447858,0,0.248505071130865,0,0.67952103036807,0.523014231561666,0,0,3.60252173225874,0.821432273351958,0,0.429765441419957,0.525774708558629,0,0,0,0.199679000498991,0,0,0,0,3.49487848582361,0,0,0,0,0,0.795229689809303,1.63444087333891,1.12527203925513,0,0,0,0,4.49546719269382,0,0.394028536495991,0.104909176269996,0,0,0.767660789277781,0,0,0,0,0,0.326587360109409,0,0.410462603746695,0.340776043570843,0.339936274560377,0,0,1.16354660725395,0.66116300871345,0.171086837884329,1.40963004463334,0,0,0,0.496166021811951,0,0.121792598380896,0,0,0,0,0.327872630709804,2.98402782875445,0.886068179966986,3.53876168215693,1.001527445652,0,0.221858103073705,0.248385611765534,0,0,0.151649117541648,0.285465333544967,0,0,0.434763085832475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192619830407303,0.214441591374926,0,0,0,0.489473409012935,0,0.308801447160972,0.219284049578707,0,0,0,0.256241518587947,0,0,0.967809053062115,0,0.132864840313363,0,0,0.245772908753719,0,0,0,0,0.567515953566836,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,4.80342448971282,0,0,4.81719188223446,4.25089728976755,1.27707087245721,4.1023272848151,3.02486035466062,5.8092092069943,2.58361033010962,0,0.588886311006154,0.11796972334774,0.550285795565037,0.231051332300676,0,0,0.198916222116275,0,0.20170506870352,0,0,0.327543835020193,0.295712172434091,4.25486783095886,3.12431239445539,2.06686796501184,2.91712726891971,1.64092442705466,0,0,0,0.255524855279191,0.535701835878287,0.336283722218824,2.42786241694653,0.455324382702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| ||
|short_description=p4@GAD1 | |short_description=p4@GAD1 | ||
}} | }} |
Latest revision as of 03:37, 18 September 2015
Short description: | p4@GAD1 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_GAD1_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 6bp_to_ENST00000344257_5end |
EntrezGene: | GAD1 |
HGNC: | 4092 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data