FFCP PHASE1:Hg19::chr1:160681573..160681587,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:160681573..160681587,- to FFCP PHASE1:Hg19::chr1:160681573..160681587,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=962 | |EntrezGene=962 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1683 | |HGNC=1683 | ||
|TSSclassifier=strong | |||
|UniProt=P09326,Q8MGR0 | |UniProt=P09326,Q8MGR0 | ||
|association_with_transcript=0bp_to_NM_001778,uc001fwn.2,uc001fwo.1,uc001fwp.2_5end | |||
|cluster_id=chr1:160681573..160681587,- | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_2_at_CD48_5end | |||
|id=chr1:160681573..160681587,- | |||
|ontology_enrichment_celltype=CL:0000738!1.01e-84!140;CL:0000037!2.70e-78!172;CL:0000566!2.70e-78!172;CL:0002087!5.13e-77!119;CL:0002031!6.80e-75!124;CL:0002032!1.78e-73!165;CL:0000837!1.78e-73!165;CL:0000988!5.77e-71!182;CL:0000766!3.83e-45!76;CL:0000839!1.91e-40!70;CL:0002057!8.51e-40!42;CL:0002194!1.86e-39!63;CL:0000576!1.86e-39!63;CL:0000040!1.86e-39!63;CL:0000559!1.86e-39!63;CL:0002009!7.16e-39!65;CL:0000557!2.69e-38!71;CL:0000763!8.79e-38!112;CL:0000049!8.79e-38!112;CL:0000860!8.80e-36!45;CL:0000542!2.49e-32!53;CL:0000051!2.49e-32!53;CL:0000838!1.08e-31!52;CL:0000945!4.48e-17!24;CL:0000826!4.48e-17!24;CL:0000134!1.48e-14!358;CL:0000084!2.22e-14!25;CL:0000827!2.22e-14!25;CL:0002320!1.79e-13!365;CL:0000791!6.46e-12!18;CL:0000789!6.46e-12!18;CL:0002420!6.46e-12!18;CL:0002419!6.46e-12!18;CL:0000790!6.46e-12!18;CL:0000219!8.07e-10!390;CL:0000236!1.53e-09!14;CL:0000625!1.41e-08!11;CL:0002393!1.58e-08!9;CL:0002397!1.58e-08!9;CL:0000048!6.46e-07!430 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.46e-36;33!CL:0002057;1.46e-36;33!CL:0000473;3.46e-36;39!CL:0000234;3.46e-36;39!CL:0000576;1.30e-30;48!CL:0002087;1.44e-25;104!CL:0000766;5.21e-25;69!CL:0000738;1.61e-21;136!CL:0000542;1.49e-20;53!CL:0000945;2.29e-19;24!CL:0000084;5.49e-15;25!CL:0000988;3.47e-14;177!CL:0000763;3.94e-13;100!CL:0000791;1.07e-11;18!CL:0000789;1.07e-11;18!CL:0002419;1.07e-11;18!CL:0000625;2.96e-10;11!CL:0000236;4.69e-09;13!CL:0000219;7.11e-09;193!CL:0000235;3.52e-08;6!CL:0000094;1.30e-07;8!CL:0002393;5.80e-07;6!CL:0002397;5.80e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,3.83e-101,136;CL:0002087,5.93e-97,115;CL:0000037,1.62e-90,168;CL:0002031,3.89e-90,120;CL:0002032,1.24e-84,161;CL:0000837,1.24e-84,161;CL:0000988,1.00e-83,177;CL:0000766,3.79e-59,72;CL:0000473,3.98e-56,48;CL:0000234,3.98e-56,48;CL:0002194,5.35e-55,59;CL:0000576,5.35e-55,59;CL:0000040,5.35e-55,59;CL:0000559,5.35e-55,59;CL:0002009,3.26e-54,61;CL:0000839,1.00e-51,66;CL:0000557,1.18e-50,67;CL:0000860,3.87e-49,42;CL:0002057,3.87e-49,42;CL:0000763,1.79e-44,108;CL:0000049,1.79e-44,108;CL:0000542,1.12e-35,53;CL:0000051,1.12e-35,53;CL:0000838,6.80e-35,52;CL:0000134,2.38e-21,354;CL:0002320,3.35e-20,361;CL:0000945,2.44e-19,24;CL:0000826,2.44e-19,24;CL:0000219,3.21e-16,386;CL:0000084,5.32e-15,25;CL:0000827,5.32e-15,25;CL:0000048,2.38e-12,427;CL:0000034,4.11e-12,441;CL:0000723,1.06e-11,433;CL:0000791,1.07e-11,18;CL:0000789,1.07e-11,18;CL:0002420,1.07e-11,18;CL:0002419,1.07e-11,18;CL:0000790,1.07e-11,18;CL:0000625,2.79e-10,11;CL:0002393,3.22e-10,9;CL:0002397,3.22e-10,9;CL:0000236,4.32e-10,14;CL:0000235,3.54e-08,6;CL:0000094,1.25e-07,8 | |||
|ontology_enrichment_development_v019=CL:0002057;3.03e-35;42!CL:0000051;1.49e-20;53!CL:0000049;2.43e-12;108!CL:0000790;1.07e-11;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060058;9.68e-08;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,9.51e-08,10 | |||
|ontology_enrichment_uberon=UBERON:0002390!3.90e-45!102;UBERON:0003061!3.90e-45!102;UBERON:0002193!1.35e-40!112;UBERON:0002371!1.93e-33!80;UBERON:0001474!2.55e-29!86;UBERON:0002405!4.51e-25!115;UBERON:0004765!4.77e-22!101;UBERON:0001434!4.77e-22!101;UBERON:0002384!2.00e-12!375;UBERON:0003081!2.27e-11!216;UBERON:0007023!4.23e-11!115;UBERON:0002204!7.97e-08!167;UBERON:0000178!3.99e-07!15;UBERON:0000179!3.99e-07!15;UBERON:0000463!3.99e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;7.34e-09;15!UBERON:0000179;7.34e-09;15!UBERON:0000463;7.34e-09;15!UBERON:0002390;4.33e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,5.53e-60,98;UBERON:0003061,5.53e-60,98;UBERON:0002193,8.78e-55,108;UBERON:0002405,4.11e-46,93;UBERON:0002371,7.38e-45,76;UBERON:0001474,6.25e-40,82;UBERON:0004765,2.07e-34,90;UBERON:0001434,8.43e-29,100;UBERON:0002384,3.64e-19,371;UBERON:0003081,1.89e-17,203;UBERON:0002204,5.10e-11,167;UBERON:0000178,7.50e-09,15;UBERON:0000179,7.50e-09,15;UBERON:0000463,7.50e-09,15;UBERON:0004177,1.15e-07,7;UBERON:0005057,1.15e-07,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.3786011716142,0,0,0,0,0,0,0,0,0,139.530878895759,114.119819335425,109.486696807328,20.0615781192941,15.7370053219857,11.1467608787575,0,0,0,10.0707360754392,36.9640004467296,2.93600439334847,18.8358438900838,9.82667792603694,11.9355978893719,43.6635174767852,72.8760748542704,33.2272482248101,75.0254912102554,100.515001021223,65.2551124595226,181.759506860245,230.665185180244,269.134836307845,179.2323604167,202.623118864519,232.462031980479,320.268737404319,311.123617487404,358.880189475006,93.7446850922171,168.928906885807,242.251916231801,217.931731368083,337.296407456974,279.390323974181,66.9598139379034,103.322174648005,63.9337125799041,300.946980457842,413.05644357515,406.70292859411,146.477971844681,158.009324281321,206.112213625156,306.332148332485,496.806530947225,630.709538169683,91.6847942593827,84.4039070861223,87.2179965314844,59.3095172453494,45.8039523166594,42.9137316481204,136.236091508317,87.5233379675996,82.0162050403206,17.5996244461323,14.7457425040775,15.1216573156804,29.0176551345225,12.0118796110804,21.8405927182704,25.1197051658248,20.989182599778,2.27685187643779,2.34894875748376,4.20500550937752,2.64342657158052,4.48406850385229,5.00429761072646,0.983548850569165,0.786021525498329,2.05601498999509,16.2170900528958,6.19252306603822,8.04861269749047,7.79306913631645,25.7358155404751,6.18672405697158,8.4182879941776,11.1029584143656,21.7755243533648,30.954124719251,49.8246850949139,45.0450528990933,32.1681425165908,6.82118190545478,5.08327573370455,4.18142095219907,44.8704997082362,17.6281427056884,14.0887252647878,14.9281618291507,28.0337564605205,27.3455050619696,27.5631092890028,28.9104228629324,28.0290678428176,26.2354525759926,27.70293848915,36.9507598614471,3.02410114837099,1.60464117470104,3.33096128930438,0,0,0,0,0,0,0,0,0,0,0,0.916853528483988,0,0,10.0609692032952,9.0547463395619,24.4642647354712,1.90792499444274,5.71994910780128,1.48583000531826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.495845917967,23.2668158488995,0,0,0,0,0,0.709336764396714,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,9.27072508770766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,119.661464958475,187.437416376529,100.326034544892,0,0,0,0,0,0,3.4486426652716,1.40877494421162,0.207328115540772,0.432359860250884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,85.1366464488333,67.8047073433371,101.200290951855,0,0,0,0,0,0,56.4909125727377,5.71389204585589,1.94064817373566,3.7219480521127,0,0,0,0.670065061337395,0,9.73709131131337,5.9832291840805,19.4775291314937,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.0602257763563,13.8057088523915,11.526576242772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31555925987561,0.784306353074702,0,0,0,4.12164046590889,0,0,0,0,0,0,0,0,0,0,0,0.170453254832202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.239293992399,0,0,0,0,0,0.422215270595328,0,0,0,0,0,0,3.01260162485693,0,0,0,0,37.0436754739484,33.6440371142645,30.1913009202306,31.6848261358859,30.8521704814646,30.4782456260577,27.0015718619057,22.2075049362396,0,0,0,13.192025433926,0.865615277858669,2.91681557728498,3.50737800003409,8.3823336001783,11.490322207942,10.5836791361941,0,0,0,2.35019843659535,0,1.18504244461122,0.1605880751037,0,1.27753871307098,8.93113896364988,0,0,0,9.18324048389589,0,0,0,0,0,0,1.61158997199083,0,17.0508377944542,0,0,0.296964680832639,0,0,0,0,0,0,0.996239941255349,8.56480138146558,0,0,200.751317707004,0,0,0,0,0.690503839458535,16.7638164642858,0,0,0.278304294485554,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0.331737779793674,0,0.438770794307945,0,0,0.538651809526579,0,0,0,0,0.957003479195758,0.183195186803725,0.533034776018635,24.5263915669768,2.5116841023204,0.498635045700469,0,0,0,0,0,0,0,0,0,0,1.50377859655677,1.22206028986725,0,0,0,0.202203398942031,0.802577647298789,0.234264445725339,1.45963831372533,0,0,0,2.41981432097328,0,1.26373159256976,0,0,0,0,0,0,0,0,0,0,0,0.873633341210151,0,0,0,0,1.35784623083787,0,0,0,0,0.0633107959558787,0,0,1.06726497369676,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,9.20105739977601,0.279282401272254,0,0,0.199679000498991,0,0.669514372325618,0.53746777989381,0,0,0,0,0,0,68.9240923015486,0,0.136203406111576,0,0,0,1.5748172408605,0,0,0,0.551639951094387,0.209818352539992,0,0,0,1.42939065274673,0,0,0,0,0,0,0.574647645245373,0,0,0.732761168390412,0,0,0.66116300871345,0,0,2.77647272676006,2.51526888159466,3.72815149812476,8.93098839261511,15.0184840242438,10.1087856656144,0,0,0,0,0,0,0,0,0,0,0.443716206147409,0.248385611765534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414775308455192,0.779441235357554,0.132864840313363,0,0,0,0,21.5986387523324,0,1.20550485762571,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10406443001755,0,0,0,0,0,0.319267718114302,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,1.35378591028663,0,0.78151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| 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| ||
|short_description=p2@CD48 | |||
}} | }} |
Latest revision as of 03:06, 18 September 2015
Short description: | p2@CD48 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CD48_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | 0bp_to_NM_001778, uc001fwn.2, uc001fwo.1, uc001fwp.2_5end |
EntrezGene: | CD48 |
HGNC: | 1683 |
UniProt: | P09326Q8MGR0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 5.53e-60 | 98 |
blood island | 5.53e-60 | 98 |
hemolymphoid system | 8.78e-55 | 108 |
immune system | 4.11e-46 | 93 |
bone marrow | 7.38e-45 | 76 |
bone element | 6.25e-40 | 82 |
skeletal element | 2.07e-34 | 90 |
skeletal system | 8.43e-29 | 100 |
connective tissue | 3.64e-19 | 371 |
lateral plate mesoderm | 1.89e-17 | 203 |
musculoskeletal system | 5.10e-11 | 167 |
blood | 7.50e-09 | 15 |
haemolymphatic fluid | 7.50e-09 | 15 |
organism substance | 7.50e-09 | 15 |
hemopoietic organ | 1.15e-07 | 7 |
immune organ | 1.15e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 9.51e-08 | 10 |