FFCP PHASE1:Hg19::chr4:57547870..57547873,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr4:57547870..57547873,-
|short_description=p11@HOPX
|description=CAGE_peak_11_at_HOPX_5end
|association_with_transcript=0bp_to_ENST00000420433,ENST00000509435...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=84525 | |EntrezGene=84525 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24961 | |HGNC=24961 | ||
|TSSclassifier=strong | |||
|UniProt=Q9BPY8,B7WNL2,G3V294,G3V469,E9PB55 | |UniProt=Q9BPY8,B7WNL2,G3V294,G3V469,E9PB55 | ||
|association_with_transcript=0bp_to_ENST00000420433,ENST00000509435,ENST00000554144,ENST00000557328,NM_001145460,NM_032495,NM_139212,uc003hca.2,uc003hcb.2,uc003hcc.2,uc003hcd.2,uc003hce.2_5end | |||
|cluster_id=chr4:57547870..57547873,- | |||
|coexpression_cluster_id=C1942 | |||
|description=CAGE_peak_11_at_HOPX_5end | |||
|id=chr4:57547870..57547873,- | |||
|ontology_enrichment_celltype=CL:0002605!2.58e-09!3 | |||
|ontology_enrichment_celltype_v019=CL:0002605;5.09e-15;3!CL:0000047;3.93e-11;2!CL:0002319;6.50e-08;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0002605,6.02e-15,3;CL:0000047,4.22e-10,8;CL:0002319,6.73e-08,25 | |||
|ontology_enrichment_development_v019=UBERON:0006241;1.67e-14;3!UBERON:0003057;1.67e-14;3!UBERON:0006601;3.96e-14;82!UBERON:0006215;6.59e-14;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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| ||
|short_description=p11@HOPX | |||
}} | }} |
Latest revision as of 03:04, 18 September 2015
Short description: | p11@HOPX |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_HOPX_5end |
Coexpression cluster: | C1942_Neural_spinal_Astrocyte_Neurons_caudate_locus_medial |
Association with transcript: | 0bp_to_ENST00000420433, ENST00000509435, ENST00000554144, ENST00000557328, NM_001145460, NM_032495, NM_139212, uc003hca.2, uc003hcb.2, uc003hcc.2, uc003hcd.2, uc003hce.2_5end |
EntrezGene: | HOPX |
HGNC: | 24961 |
UniProt: | Q9BPY8B7WNL2G3V294G3V469E9PB55 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebral cortex | 6.02e-15 | 3 |
neuronal stem cell | 4.22e-10 | 8 |
neural cell | 6.73e-08 | 25 |